Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:41:38 (2128089): wrapper (7.7.26015): starting
21:41:38 (2128089): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 21:41:38] Arguments: --nthreads 4
[2025-06-06 21:41:38] Threads: 4
[2025-06-06 21:41:38] Checking for CVMFS
[2025-06-06 21:41:38] No cvmfs_config command found, will try listing directly
[2025-06-06 21:41:38] CVMFS is ok
[2025-06-06 21:41:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 21:41:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 21:41:38] Further information can be found at the LHC@home message board.
[2025-06-06 21:41:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 21:41:38] Checking for apptainer binary...
[2025-06-06 21:41:38] which: no apptainer in ((null))
[2025-06-06 21:41:38] apptainer is not installed, using version from CVMFS
[2025-06-06 21:41:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 21:41:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 21:41:38] apptainer works
[2025-06-06 21:41:38] Set ATHENA_PROC_NUMBER=4
[2025-06-06 21:41:38] Set ATHENA_CORE_NUMBER=4
[2025-06-06 21:41:38] Starting ATLAS job with PandaID=6677471960
[2025-06-06 21:41:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 23:07:11]  *** The last 200 lines of the pilot log: ***
[2025-06-06 23:07:11]  is_altstaged=None
[2025-06-06 23:07:11]  is_tar=False
[2025-06-06 23:07:11]  lfn=log.45006595._021317.job.log.tgz.1
[2025-06-06 23:07:11]  mtime=0
[2025-06-06 23:07:11]  protocol_id=None
[2025-06-06 23:07:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 23:07:11]  replicas=None
[2025-06-06 23:07:11]  scope=mc23_13p6TeV
[2025-06-06 23:07:11]  status=None
[2025-06-06 23:07:11]  status_code=0
[2025-06-06 23:07:11]  storage_token=
[2025-06-06 23:07:11]  surl=/scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6677471960/log.45006595._021317.job.log.tgz.1
[2025-06-06 23:07:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/34/log.45006595._021317.job.log.tgz.1
[2025-06-06 23:07:11]  workdir=None
[2025-06-06 23:07:11] ]
[2025-06-06 23:07:11] 2025-06-06 21:06:41,973 | INFO     | transferring file log.45006595._021317.job.log.tgz.1 from /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6677471960/log.45006595._021317.job.log.tgz.1 to /scratch/b
[2025-06-06 23:07:11] 2025-06-06 21:06:41,974 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6677471960/log.45006595._021317.job.log.tgz.1 /scratch/boinc/var/slot16/slots/1/lo
[2025-06-06 23:07:11] 2025-06-06 21:06:41,986 | INFO     | adding to output.list: log.45006595._021317.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/34/log.45006595._021317.job.log.tg
[2025-06-06 23:07:11] 2025-06-06 21:06:41,987 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 23:07:11] 2025-06-06 21:06:41,987 | INFO     | summary of transferred files:
[2025-06-06 23:07:11] 2025-06-06 21:06:41,987 | INFO     |  -- lfn=log.45006595._021317.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 23:07:11] 2025-06-06 21:06:41,987 | INFO     | stage-out finished correctly
[2025-06-06 23:07:11] 2025-06-06 21:06:44,516 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 23:07:11] 2025-06-06 21:06:46,283 | INFO     | job 6677471960 has state=finished
[2025-06-06 23:07:11] 2025-06-06 21:06:46,283 | INFO     | preparing for final server update for job 6677471960 in state='finished'
[2025-06-06 23:07:11] 2025-06-06 21:06:46,284 | INFO     | this job has now completed (state=finished)
[2025-06-06 23:07:11] 2025-06-06 21:06:46,284 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 23:07:11] 2025-06-06 21:06:46,284 | INFO     | log transfer has been attempted: DONE
[2025-06-06 23:07:11] 2025-06-06 21:06:46,284 | INFO     | job 6677471960 has finished - writing final server update
[2025-06-06 23:07:11] 2025-06-06 21:06:46,284 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1727303/.job.ad'
[2025-06-06 23:07:11] 2025-06-06 21:06:46,284 | INFO     | total number of processed events: 400 (read)
[2025-06-06 23:07:11] 2025-06-06 21:06:46,287 | INFO     | executing command: lscpu
[2025-06-06 23:07:11] 2025-06-06 21:06:46,324 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 23:07:11] 2025-06-06 21:06:46,639 | WARNING  | process 2138798 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 23:07:11] 2025-06-06 21:06:46,639 | INFO     | using path: /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6677471960/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 23:07:11] 2025-06-06 21:06:46,766 | INFO     | number of running child processes to parent process 2138798: 1
[2025-06-06 23:07:11] 2025-06-06 21:06:46,766 | INFO     | maximum number of monitored processes: 6
[2025-06-06 23:07:11] 2025-06-06 21:06:49,269 | INFO     | monitor loop #388: job 0:6677471960 is in state 'finished'
[2025-06-06 23:07:11] 2025-06-06 21:06:49,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 23:07:11] 2025-06-06 21:06:50,470 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 23:07:11] 2025-06-06 21:06:50,470 | INFO     | using path: /scratch/boinc/var/slot16/slots/1/PanDA_Pilot-6677471960/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 23:07:11] 2025-06-06 21:06:50,471 | INFO     | extracted standard info from prmon json
[2025-06-06 23:07:11] 2025-06-06 21:06:50,471 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 23:07:11] 2025-06-06 21:06:50,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 23:07:11] 2025-06-06 21:06:50,471 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 23:07:11] 2025-06-06 21:06:50,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 23:07:11] 2025-06-06 21:06:50,472 | INFO     | fitting pss+swap vs Time
[2025-06-06 23:07:11] 2025-06-06 21:06:50,472 | INFO     | sum of square deviations: 141539398.0
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | sum of deviations: -8372209313.000001
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | mean x: 1749241549.0
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | mean y: 2409109.2207792206
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | -- intersect: 103471948998.20877
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | intersect: 103471948998.20877
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | chi2: 0.04529848590341347
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | -- intersect: 103471948998.20877
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | current memory leak: -59.15 B/s (using 77 data points, chi2=0.05)
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | ..............................
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | . Timing measurements:
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | . get job = 0 s
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | . initial setup = 1 s
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | . payload setup = 4 s
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | . stage-in = 0 s
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | . payload execution = 5075 s
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | . stage-out = 0 s
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | . log creation = 0 s
[2025-06-06 23:07:11] 2025-06-06 21:06:50,473 | INFO     | ..............................
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | 
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | job summary report
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | --------------------------------------------------
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | PanDA job id: 6677471960
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | task id: 45006595
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | errors: (none)
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | pilot state: finished 
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | transexitcode: 0
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | exeerrorcode: 0
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | exeerrordiag: 
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | exitcode: 0
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | exitmsg: OK
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | cpuconsumptiontime: 19369 s
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | nevents: 400
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | neventsw: 0
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | pid: 2138798
[2025-06-06 23:07:11] 2025-06-06 21:06:51,012 | INFO     | pgrp: 2138798
[2025-06-06 23:07:11] 2025-06-06 21:06:51,013 | INFO     | corecount: 4
[2025-06-06 23:07:11] 2025-06-06 21:06:51,013 | INFO     | event service: False
[2025-06-06 23:07:11] 2025-06-06 21:06:51,013 | INFO     | sizes: {0: 2397351, 3: 2397557, 11: 2397585, 5083: 2423901, 5084: 2432864, 5087: 2432920, 5093: 2433218}
[2025-06-06 23:07:11] 2025-06-06 21:06:51,013 | INFO     | --------------------------------------------------
[2025-06-06 23:07:11] 2025-06-06 21:06:51,013 | INFO     | 
[2025-06-06 23:07:11] 2025-06-06 21:06:51,013 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,027 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 23:07:11] 2025-06-06 21:06:51,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 23:07:11] 2025-06-06 21:06:51,027 | INFO     | job 6677471960 has completed (purged errors)
[2025-06-06 23:07:11] 2025-06-06 21:06:51,027 | INFO     | overall cleanup function is called
[2025-06-06 23:07:11] 2025-06-06 21:06:52,033 | INFO     | --- collectZombieJob: --- 10, [2138798]
[2025-06-06 23:07:11] 2025-06-06 21:06:52,033 | INFO     | zombie collector waiting for pid 2138798
[2025-06-06 23:07:11] 2025-06-06 21:06:52,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 23:07:11] 2025-06-06 21:06:52,033 | INFO     | collected zombie processes
[2025-06-06 23:07:11] 2025-06-06 21:06:52,033 | INFO     | will attempt to kill all subprocesses of pid=2138798
[2025-06-06 23:07:11] 2025-06-06 21:06:52,153 | INFO     | process IDs to be killed: [2138798] (in reverse order)
[2025-06-06 23:07:11] 2025-06-06 21:06:52,202 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 23:07:11] 2025-06-06 21:06:52,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 23:07:11] 2025-06-06 21:06:52,207 | INFO     | did not find any defunct processes belonging to 2138798
[2025-06-06 23:07:11] 2025-06-06 21:06:52,211 | INFO     | did not find any defunct processes belonging to 2138798
[2025-06-06 23:07:11] 2025-06-06 21:06:52,211 | INFO     | ready for new job
[2025-06-06 23:07:11] 2025-06-06 21:06:52,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 23:07:11] 2025-06-06 21:06:52,212 | INFO     | **************************************
[2025-06-06 23:07:11] 2025-06-06 21:06:52,212 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 23:07:11] 2025-06-06 21:06:52,212 | INFO     | **************************************
[2025-06-06 23:07:11] 2025-06-06 21:06:52,213 | INFO     | 
[2025-06-06 23:07:11] 2025-06-06 21:06:52,215 | INFO     | architecture information:
[2025-06-06 23:07:11] 2025-06-06 21:06:52,215 | INFO     | executing command: cat /etc/os-release
[2025-06-06 23:07:11] 2025-06-06 21:06:52,224 | INFO     | cat /etc/os-release:
[2025-06-06 23:07:11] NAME="CentOS Linux"
[2025-06-06 23:07:11] VERSION="7 (Core)"
[2025-06-06 23:07:11] ID="centos"
[2025-06-06 23:07:11] ID_LIKE="rhel fedora"
[2025-06-06 23:07:11] VERSION_ID="7"
[2025-06-06 23:07:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 23:07:11] ANSI_COLOR="0;31"
[2025-06-06 23:07:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 23:07:11] HOME_URL="https://www.centos.org/"
[2025-06-06 23:07:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 23:07:11] 
[2025-06-06 23:07:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 23:07:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 23:07:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 23:07:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 23:07:11] 
[2025-06-06 23:07:11] 2025-06-06 21:06:52,225 | INFO     | **************************************
[2025-06-06 23:07:11] 2025-06-06 21:06:52,726 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2025-06-06 23:07:11] 2025-06-06 21:06:52,737 | INFO     | sufficient remaining disk space (714541629440 B)
[2025-06-06 23:07:11] 2025-06-06 21:06:52,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 23:07:11] 2025-06-06 21:06:52,738 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 23:07:11] 2025-06-06 21:06:52,738 | INFO     | update_server=False
[2025-06-06 23:07:11] 2025-06-06 21:06:52,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 23:07:11] 2025-06-06 21:06:52,738 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 23:07:11] 2025-06-06 21:06:52,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 23:07:11] 2025-06-06 21:06:52,738 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 23:07:11] 2025-06-06 21:06:52,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 23:07:11] 2025-06-06 21:06:52,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 23:07:11] 2025-06-06 21:06:52,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 23:07:11] 2025-06-06 21:06:52,778 | INFO     | aborting loop
[2025-06-06 23:07:11] 2025-06-06 21:06:52,841 | INFO     | all job control threads have been joined
[2025-06-06 23:07:11] 2025-06-06 21:06:53,482 | INFO     | all data control threads have been joined
[2025-06-06 23:07:11] 2025-06-06 21:06:53,743 | INFO     | [job] retrieve thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:53,752 | INFO     | [job] validate thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:53,783 | INFO     | [job] job monitor thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:53,847 | INFO     | [job] control thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:53,870 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:54,025 | INFO     | all payload control threads have been joined
[2025-06-06 23:07:11] 2025-06-06 21:06:54,271 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:54,488 | INFO     | [data] control thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:54,721 | INFO     | [payload] validate_post thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:54,744 | INFO     | [data] copytool_out thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:54,813 | INFO     | [payload] failed_post thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:54,925 | INFO     | [data] copytool_in thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:55,030 | INFO     | [payload] control thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:55,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 23:07:11] 2025-06-06 21:06:55,224 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:55,531 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 23:07:11] 2025-06-06 21:06:56,537 | INFO     | [job] queue monitor thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:06:59,074 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:07:03,330 | INFO     | job.realtimelogging is not enabled
[2025-06-06 23:07:11] 2025-06-06 21:07:04,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 23:07:11] 2025-06-06 21:07:06,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23168151729984)>', '<ExcThread(monitor, started 23167844189952)>']
[2025-06-06 23:07:11] 2025-06-06 21:07:06,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 23:07:11] 2025-06-06 21:07:06,809 | INFO     | [monitor] control thread has ended
[2025-06-06 23:07:11] 2025-06-06 21:07:11,287 | INFO     | all workflow threads have been joined
[2025-06-06 23:07:11] 2025-06-06 21:07:11,287 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 23:07:11] 2025-06-06 21:07:11,287 | INFO     | traces error code: 0
[2025-06-06 23:07:11] 2025-06-06 21:07:11,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 23:07:11] 2025-06-06 21:07:11,358 [wrapper] ==== pilot stdout END ====
[2025-06-06 23:07:11] 2025-06-06 21:07:11,360 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 23:07:11] 2025-06-06 21:07:11,362 [wrapper] pilotpid: 2131782
[2025-06-06 23:07:11] 2025-06-06 21:07:11,364 [wrapper] Pilot exit status: 0
[2025-06-06 23:07:11] 2025-06-06 21:07:11,371 [wrapper] pandaids: 6677471960
[2025-06-06 23:07:11] 2025-06-06 21:07:11,401 [wrapper] cleanup supervisor_pilot 2244636 2131783
[2025-06-06 23:07:11] 2025-06-06 21:07:11,403 [wrapper] Test setup, not cleaning
[2025-06-06 23:07:11] 2025-06-06 21:07:11,405 [wrapper] apfmon messages muted
[2025-06-06 23:07:11] 2025-06-06 21:07:11,407 [wrapper] ==== wrapper stdout END ====
[2025-06-06 23:07:11] 2025-06-06 21:07:11,409 [wrapper] ==== wrapper stderr END ====
[2025-06-06 23:07:11]  *** Error codes and diagnostics ***
[2025-06-06 23:07:11]     "exeErrorCode": 0,
[2025-06-06 23:07:11]     "exeErrorDiag": "",
[2025-06-06 23:07:11]     "pilotErrorCode": 0,
[2025-06-06 23:07:11]     "pilotErrorDiag": "",
[2025-06-06 23:07:11]  *** Listing of results directory ***
[2025-06-06 23:07:11] total 389176
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc    495897 Jun  3 07:38 pilot3.tar.gz
[2025-06-06 23:07:11] -rwx------ 1 boinc boinc     37140 Jun  3 07:44 runpilot2-wrapper.sh
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc      5111 Jun  3 07:44 queuedata.json
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc       100 Jun  6 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 23:07:11] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 21:41 run_atlas
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc       105 Jun  6 21:41 job.xml
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc      6634 Jun  6 21:41 init_data.xml
[2025-06-06 23:07:11] -rw-r--r-- 2 boinc boinc 214052909 Jun  6 21:41 EVNT.45006593._000853.pool.root.1
[2025-06-06 23:07:11] -rw-r--r-- 2 boinc boinc     15093 Jun  6 21:41 start_atlas.sh
[2025-06-06 23:07:11] drwxrwx--x 2 boinc boinc      4096 Jun  6 21:41 shared
[2025-06-06 23:07:11] -rw-r--r-- 2 boinc boinc    508874 Jun  6 21:41 input.tar.gz
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc         0 Jun  6 21:41 boinc_lockfile
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc      2524 Jun  6 21:41 pandaJob.out
[2025-06-06 23:07:11] -rw------- 1 boinc boinc    985748 Jun  6 21:41 agis_schedconf.cvmfs.json
[2025-06-06 23:07:11] -rw------- 1 boinc boinc   1598969 Jun  6 21:41 agis_ddmendpoints.agis.ALL.json
[2025-06-06 23:07:11] drwx------ 4 boinc boinc      4096 Jun  6 21:41 pilot3
[2025-06-06 23:07:11] -rw------- 1 boinc boinc 179106203 Jun  6 23:06 HITS.45006595._021317.pool.root.1
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc       529 Jun  6 23:06 boinc_task_state.xml
[2025-06-06 23:07:11] -rw------- 1 boinc boinc        95 Jun  6 23:06 pilot_heartbeat.json
[2025-06-06 23:07:11] -rw------- 1 boinc boinc      1027 Jun  6 23:06 memory_monitor_summary.json
[2025-06-06 23:07:11] -rw------- 1 boinc boinc    246814 Jun  6 23:06 log.45006595._021317.job.log.tgz.1
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc        27 Jun  6 23:06 wrapper_checkpoint.txt
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc      8192 Jun  6 23:06 boinc_mmap_file
[2025-06-06 23:07:11] -rw------- 1 boinc boinc      7729 Jun  6 23:06 heartbeat.json
[2025-06-06 23:07:11] -rw------- 1 boinc boinc      4558 Jun  6 23:07 pilotlog.txt
[2025-06-06 23:07:11] -rw------- 1 boinc boinc    512753 Jun  6 23:07 log.45006595._021317.job.log.1
[2025-06-06 23:07:11] -rw------- 1 boinc boinc       357 Jun  6 23:07 output.list
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc       620 Jun  6 23:07 runtime_log
[2025-06-06 23:07:11] -rw------- 1 boinc boinc    778240 Jun  6 23:07 result.tar.gz
[2025-06-06 23:07:11] -rw------- 1 boinc boinc       660 Jun  6 23:07 x7cKDmJdZg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGHiKDmrG6b1n.diag
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc      9025 Jun  6 23:07 runtime_log.err
[2025-06-06 23:07:11] -rw-r--r-- 1 boinc boinc     21281 Jun  6 23:07 stderr.txt
[2025-06-06 23:07:11] HITS file was successfully produced:
[2025-06-06 23:07:11] -rw------- 1 boinc boinc 179106203 Jun  6 23:06 shared/HITS.pool.root.1
[2025-06-06 23:07:11]  *** Contents of shared directory: ***
[2025-06-06 23:07:11] total 385236
[2025-06-06 23:07:11] -rw-r--r-- 2 boinc boinc 214052909 Jun  6 21:41 ATLAS.root_0
[2025-06-06 23:07:11] -rw-r--r-- 2 boinc boinc     15093 Jun  6 21:41 start_atlas.sh
[2025-06-06 23:07:11] -rw-r--r-- 2 boinc boinc    508874 Jun  6 21:41 input.tar.gz
[2025-06-06 23:07:11] -rw------- 1 boinc boinc 179106203 Jun  6 23:06 HITS.pool.root.1
[2025-06-06 23:07:11] -rw------- 1 boinc boinc    778240 Jun  6 23:07 result.tar.gz
23:07:12 (2128089): run_atlas exited; CPU time 19431.376000
23:07:12 (2128089): called boinc_finish(0)

</stderr_txt>
]]>

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