Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:27:35 (2749394): wrapper (7.7.26015): starting
05:27:35 (2749394): wrapper: running run_atlas (--nthreads 4)
[2025-06-07 05:27:35] Arguments: --nthreads 4
[2025-06-07 05:27:35] Threads: 4
[2025-06-07 05:27:35] Checking for CVMFS
[2025-06-07 05:27:35] No cvmfs_config command found, will try listing directly
[2025-06-07 05:27:35] CVMFS is ok
[2025-06-07 05:27:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-07 05:27:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-07 05:27:35] Further information can be found at the LHC@home message board.
[2025-06-07 05:27:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-07 05:27:35] Checking for apptainer binary...
[2025-06-07 05:27:35] which: no apptainer in ((null))
[2025-06-07 05:27:35] apptainer is not installed, using version from CVMFS
[2025-06-07 05:27:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-07 05:27:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-07 05:27:36] apptainer works
[2025-06-07 05:27:36] Set ATHENA_PROC_NUMBER=4
[2025-06-07 05:27:36] Set ATHENA_CORE_NUMBER=4
[2025-06-07 05:27:36] Starting ATLAS job with PandaID=6677471114
[2025-06-07 05:27:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 06:45:21]  *** The last 200 lines of the pilot log: ***
[2025-06-07 06:45:21]  is_tar=False
[2025-06-07 06:45:21]  lfn=log.45006595._020811.job.log.tgz.1
[2025-06-07 06:45:21]  mtime=0
[2025-06-07 06:45:21]  protocol_id=None
[2025-06-07 06:45:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-07 06:45:21]  replicas=None
[2025-06-07 06:45:21]  scope=mc23_13p6TeV
[2025-06-07 06:45:21]  status=None
[2025-06-07 06:45:21]  status_code=0
[2025-06-07 06:45:21]  storage_token=
[2025-06-07 06:45:21]  surl=/scratch/boinc/var/slot16/slots/0/PanDA_Pilot-6677471114/log.45006595._020811.job.log.tgz.1
[2025-06-07 06:45:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/9b/log.45006595._020811.job.log.tgz.1
[2025-06-07 06:45:21]  workdir=None
[2025-06-07 06:45:21] ]
[2025-06-07 06:45:21] 2025-06-07 04:44:56,272 | INFO     | transferring file log.45006595._020811.job.log.tgz.1 from /scratch/boinc/var/slot16/slots/0/PanDA_Pilot-6677471114/log.45006595._020811.job.log.tgz.1 to /scratch/b
[2025-06-07 06:45:21] 2025-06-07 04:44:56,272 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot16/slots/0/PanDA_Pilot-6677471114/log.45006595._020811.job.log.tgz.1 /scratch/boinc/var/slot16/slots/0/lo
[2025-06-07 06:45:21] 2025-06-07 04:44:56,284 | INFO     | adding to output.list: log.45006595._020811.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/9b/log.45006595._020811.job.log.tg
[2025-06-07 06:45:21] 2025-06-07 04:44:56,285 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-07 06:45:21] 2025-06-07 04:44:56,285 | INFO     | summary of transferred files:
[2025-06-07 06:45:21] 2025-06-07 04:44:56,285 | INFO     |  -- lfn=log.45006595._020811.job.log.tgz.1, status_code=0, status=transferred
[2025-06-07 06:45:21] 2025-06-07 04:44:56,285 | INFO     | stage-out finished correctly
[2025-06-07 06:45:21] 2025-06-07 04:44:57,811 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-07 06:45:21] 2025-06-07 04:44:58,377 | INFO     | monitor loop #355: job 0:6677471114 is in state 'finished'
[2025-06-07 06:45:21] 2025-06-07 04:44:58,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 06:45:21] 2025-06-07 04:44:58,766 | INFO     | job 6677471114 has state=finished
[2025-06-07 06:45:21] 2025-06-07 04:44:58,767 | INFO     | preparing for final server update for job 6677471114 in state='finished'
[2025-06-07 06:45:21] 2025-06-07 04:44:58,767 | INFO     | this job has now completed (state=finished)
[2025-06-07 06:45:21] 2025-06-07 04:44:58,767 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-07 06:45:21] 2025-06-07 04:44:58,767 | INFO     | log transfer has been attempted: DONE
[2025-06-07 06:45:21] 2025-06-07 04:44:58,767 | INFO     | job 6677471114 has finished - writing final server update
[2025-06-07 06:45:21] 2025-06-07 04:44:58,767 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1727303/.job.ad'
[2025-06-07 06:45:21] 2025-06-07 04:44:58,767 | INFO     | total number of processed events: 400 (read)
[2025-06-07 06:45:21] 2025-06-07 04:44:58,770 | INFO     | executing command: lscpu
[2025-06-07 06:45:21] 2025-06-07 04:44:58,806 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-07 06:45:21] 2025-06-07 04:45:00,880 | INFO     | monitor loop #356: job 0:6677471114 is in state 'finished'
[2025-06-07 06:45:21] 2025-06-07 04:45:00,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 06:45:21] 2025-06-07 04:45:01,146 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-07 06:45:21] 2025-06-07 04:45:01,146 | INFO     | using path: /scratch/boinc/var/slot16/slots/0/PanDA_Pilot-6677471114/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 06:45:21] 2025-06-07 04:45:01,147 | INFO     | extracted standard info from prmon json
[2025-06-07 06:45:21] 2025-06-07 04:45:01,147 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 06:45:21] 2025-06-07 04:45:01,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 06:45:21] 2025-06-07 04:45:01,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 06:45:21] 2025-06-07 04:45:01,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 06:45:21] 2025-06-07 04:45:01,148 | INFO     | fitting pss+swap vs Time
[2025-06-07 06:45:21] 2025-06-07 04:45:01,148 | INFO     | sum of square deviations: 101843770.0
[2025-06-07 06:45:21] 2025-06-07 04:45:01,148 | INFO     | sum of deviations: -2552492173.9999986
[2025-06-07 06:45:21] 2025-06-07 04:45:01,148 | INFO     | mean x: 1749269262.0
[2025-06-07 06:45:21] 2025-06-07 04:45:01,148 | INFO     | mean y: 2413236.492753623
[2025-06-07 06:45:21] 2025-06-07 04:45:01,148 | INFO     | -- intersect: 43844035571.11129
[2025-06-07 06:45:21] 2025-06-07 04:45:01,148 | INFO     | intersect: 43844035571.11129
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | chi2: 0.007218560829415615
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | -- intersect: 43844035571.11129
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | current memory leak: -25.06 B/s (using 69 data points, chi2=0.01)
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | ..............................
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | . Timing measurements:
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | . get job = 0 s
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | . initial setup = 1 s
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | . payload setup = 4 s
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | . stage-in = 0 s
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | . payload execution = 4611 s
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | . stage-out = 0 s
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | . log creation = 0 s
[2025-06-07 06:45:21] 2025-06-07 04:45:01,149 | INFO     | ..............................
[2025-06-07 06:45:21] 2025-06-07 04:45:01,193 | INFO     | 
[2025-06-07 06:45:21] 2025-06-07 04:45:01,193 | INFO     | job summary report
[2025-06-07 06:45:21] 2025-06-07 04:45:01,193 | INFO     | --------------------------------------------------
[2025-06-07 06:45:21] 2025-06-07 04:45:01,193 | INFO     | PanDA job id: 6677471114
[2025-06-07 06:45:21] 2025-06-07 04:45:01,193 | INFO     | task id: 45006595
[2025-06-07 06:45:21] 2025-06-07 04:45:01,193 | INFO     | errors: (none)
[2025-06-07 06:45:21] 2025-06-07 04:45:01,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 06:45:21] 2025-06-07 04:45:01,193 | INFO     | pilot state: finished 
[2025-06-07 06:45:21] 2025-06-07 04:45:01,193 | INFO     | transexitcode: 0
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | exeerrorcode: 0
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | exeerrordiag: 
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | exitcode: 0
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | exitmsg: OK
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | cpuconsumptiontime: 17508 s
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | nevents: 400
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | neventsw: 0
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | pid: 2760034
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | pgrp: 2760034
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | corecount: 4
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | event service: False
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | sizes: {0: 2397180, 1: 2397379, 3: 2397585, 11: 2397613, 4619: 2423789, 4620: 2432752, 4622: 2432936, 4625: 2433106}
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | --------------------------------------------------
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | 
[2025-06-07 06:45:21] 2025-06-07 04:45:01,194 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/0
[2025-06-07 06:45:21] 2025-06-07 04:45:01,206 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 06:45:21] 2025-06-07 04:45:01,207 | INFO     | job 6677471114 has completed (purged errors)
[2025-06-07 06:45:21] 2025-06-07 04:45:01,208 | INFO     | overall cleanup function is called
[2025-06-07 06:45:21] 2025-06-07 04:45:02,213 | INFO     | --- collectZombieJob: --- 10, [2760034]
[2025-06-07 06:45:21] 2025-06-07 04:45:02,213 | INFO     | zombie collector waiting for pid 2760034
[2025-06-07 06:45:21] 2025-06-07 04:45:02,213 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 06:45:21] 2025-06-07 04:45:02,213 | INFO     | collected zombie processes
[2025-06-07 06:45:21] 2025-06-07 04:45:02,214 | INFO     | will attempt to kill all subprocesses of pid=2760034
[2025-06-07 06:45:21] 2025-06-07 04:45:02,319 | INFO     | process IDs to be killed: [2760034] (in reverse order)
[2025-06-07 06:45:21] 2025-06-07 04:45:02,362 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 06:45:21] 2025-06-07 04:45:02,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 06:45:21] 2025-06-07 04:45:02,366 | INFO     | did not find any defunct processes belonging to 2760034
[2025-06-07 06:45:21] 2025-06-07 04:45:02,369 | INFO     | did not find any defunct processes belonging to 2760034
[2025-06-07 06:45:21] 2025-06-07 04:45:02,369 | INFO     | ready for new job
[2025-06-07 06:45:21] 2025-06-07 04:45:02,370 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 06:45:21] 2025-06-07 04:45:02,370 | INFO     | **************************************
[2025-06-07 06:45:21] 2025-06-07 04:45:02,371 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-07 06:45:21] 2025-06-07 04:45:02,371 | INFO     | **************************************
[2025-06-07 06:45:21] 2025-06-07 04:45:02,371 | INFO     | 
[2025-06-07 06:45:21] 2025-06-07 04:45:02,373 | INFO     | architecture information:
[2025-06-07 06:45:21] 2025-06-07 04:45:02,373 | INFO     | executing command: cat /etc/os-release
[2025-06-07 06:45:21] 2025-06-07 04:45:02,381 | INFO     | cat /etc/os-release:
[2025-06-07 06:45:21] NAME="CentOS Linux"
[2025-06-07 06:45:21] VERSION="7 (Core)"
[2025-06-07 06:45:21] ID="centos"
[2025-06-07 06:45:21] ID_LIKE="rhel fedora"
[2025-06-07 06:45:21] VERSION_ID="7"
[2025-06-07 06:45:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 06:45:21] ANSI_COLOR="0;31"
[2025-06-07 06:45:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 06:45:21] HOME_URL="https://www.centos.org/"
[2025-06-07 06:45:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 06:45:21] 
[2025-06-07 06:45:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 06:45:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 06:45:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 06:45:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 06:45:21] 
[2025-06-07 06:45:21] 2025-06-07 04:45:02,381 | INFO     | **************************************
[2025-06-07 06:45:21] 2025-06-07 04:45:02,883 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/0
[2025-06-07 06:45:21] 2025-06-07 04:45:02,893 | INFO     | sufficient remaining disk space (722321014784 B)
[2025-06-07 06:45:21] 2025-06-07 04:45:02,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 06:45:21] 2025-06-07 04:45:02,894 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 06:45:21] 2025-06-07 04:45:02,894 | INFO     | update_server=False
[2025-06-07 06:45:21] 2025-06-07 04:45:02,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 06:45:21] 2025-06-07 04:45:02,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 06:45:21] 2025-06-07 04:45:02,978 | INFO     | all data control threads have been joined
[2025-06-07 06:45:21] 2025-06-07 04:45:03,016 | INFO     | PID=2753089 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-07 06:45:21] 2025-06-07 04:45:03,016 | INFO     | .. there are 3 such processes running
[2025-06-07 06:45:21] 2025-06-07 04:45:03,016 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 06:45:21] 2025-06-07 04:45:03,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 06:45:21] 2025-06-07 04:45:03,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 06:45:21] 2025-06-07 04:45:03,383 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-07 06:45:21] 2025-06-07 04:45:03,383 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-07 06:45:21] 2025-06-07 04:45:03,383 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 06:45:21] 2025-06-07 04:45:03,383 | INFO     | will abort loop
[2025-06-07 06:45:21] 2025-06-07 04:45:03,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 06:45:21] 2025-06-07 04:45:03,898 | INFO     | [job] retrieve thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:03,899 | INFO     | [job] queue monitor thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:03,984 | INFO     | [data] control thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:04,096 | INFO     | [payload] failed_post thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:04,128 | INFO     | all job control threads have been joined
[2025-06-07 06:45:21] 2025-06-07 04:45:04,295 | INFO     | all payload control threads have been joined
[2025-06-07 06:45:21] 2025-06-07 04:45:04,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 06:45:21] 2025-06-07 04:45:04,389 | INFO     | [job] job monitor thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:04,413 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:05,057 | INFO     | [payload] validate_post thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:05,118 | INFO     | [job] validate thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:05,134 | INFO     | [job] control thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:05,140 | INFO     | [data] copytool_in thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:05,253 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:05,262 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:05,301 | INFO     | [payload] control thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:06,349 | INFO     | [data] copytool_out thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:07,863 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:13,878 | INFO     | job.realtimelogging is not enabled
[2025-06-07 06:45:21] 2025-06-07 04:45:14,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 06:45:21] 2025-06-07 04:45:16,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23332598150976)>', '<ExcThread(monitor, started 23332357367552)>']
[2025-06-07 06:45:21] 2025-06-07 04:45:17,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 06:45:21] 2025-06-07 04:45:17,088 | INFO     | [monitor] control thread has ended
[2025-06-07 06:45:21] 2025-06-07 04:45:21,212 | INFO     | all workflow threads have been joined
[2025-06-07 06:45:21] 2025-06-07 04:45:21,212 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 06:45:21] 2025-06-07 04:45:21,212 | INFO     | traces error code: 0
[2025-06-07 06:45:21] 2025-06-07 04:45:21,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 06:45:21] 2025-06-07 04:45:21,288 [wrapper] ==== pilot stdout END ====
[2025-06-07 06:45:21] 2025-06-07 04:45:21,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 06:45:21] 2025-06-07 04:45:21,293 [wrapper] pilotpid: 2753089
[2025-06-07 06:45:21] 2025-06-07 04:45:21,295 [wrapper] Pilot exit status: 0
[2025-06-07 06:45:21] 2025-06-07 04:45:21,301 [wrapper] pandaids: 6677471114
[2025-06-07 06:45:21] 2025-06-07 04:45:21,329 [wrapper] cleanup supervisor_pilot 2841420 2753090
[2025-06-07 06:45:21] 2025-06-07 04:45:21,331 [wrapper] Test setup, not cleaning
[2025-06-07 06:45:21] 2025-06-07 04:45:21,333 [wrapper] apfmon messages muted
[2025-06-07 06:45:21] 2025-06-07 04:45:21,334 [wrapper] ==== wrapper stdout END ====
[2025-06-07 06:45:21] 2025-06-07 04:45:21,336 [wrapper] ==== wrapper stderr END ====
[2025-06-07 06:45:21]  *** Error codes and diagnostics ***
[2025-06-07 06:45:21]     "exeErrorCode": 0,
[2025-06-07 06:45:21]     "exeErrorDiag": "",
[2025-06-07 06:45:21]     "pilotErrorCode": 0,
[2025-06-07 06:45:21]     "pilotErrorDiag": "",
[2025-06-07 06:45:21]  *** Listing of results directory ***
[2025-06-07 06:45:21] total 391432
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc    495897 Jun  3 07:14 pilot3.tar.gz
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc      5111 Jun  3 07:28 queuedata.json
[2025-06-07 06:45:21] -rwx------ 1 boinc boinc     37140 Jun  3 07:29 runpilot2-wrapper.sh
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc       100 Jun  7 05:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 06:45:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  7 05:27 run_atlas
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc       105 Jun  7 05:27 job.xml
[2025-06-07 06:45:21] -rw-r--r-- 2 boinc boinc 216808247 Jun  7 05:27 EVNT.45006593._000833.pool.root.1
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc      6634 Jun  7 05:27 init_data.xml
[2025-06-07 06:45:21] drwxrwx--x 2 boinc boinc      4096 Jun  7 05:27 shared
[2025-06-07 06:45:21] -rw-r--r-- 2 boinc boinc    508881 Jun  7 05:27 input.tar.gz
[2025-06-07 06:45:21] -rw-r--r-- 2 boinc boinc     15093 Jun  7 05:27 start_atlas.sh
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc         0 Jun  7 05:27 boinc_lockfile
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc      2524 Jun  7 05:27 pandaJob.out
[2025-06-07 06:45:21] -rw------- 1 boinc boinc    985748 Jun  7 05:27 agis_schedconf.cvmfs.json
[2025-06-07 06:45:21] -rw------- 1 boinc boinc   1598969 Jun  7 05:27 agis_ddmendpoints.agis.ALL.json
[2025-06-07 06:45:21] drwx------ 4 boinc boinc      4096 Jun  7 05:27 pilot3
[2025-06-07 06:45:21] -rw------- 1 boinc boinc        95 Jun  7 06:44 pilot_heartbeat.json
[2025-06-07 06:45:21] -rw------- 1 boinc boinc 178768299 Jun  7 06:44 HITS.45006595._020811.pool.root.1
[2025-06-07 06:45:21] -rw------- 1 boinc boinc      1023 Jun  7 06:44 memory_monitor_summary.json
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc      8192 Jun  7 06:44 boinc_mmap_file
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc        27 Jun  7 06:44 wrapper_checkpoint.txt
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc       529 Jun  7 06:44 boinc_task_state.xml
[2025-06-07 06:45:21] -rw------- 1 boinc boinc    236629 Jun  7 06:44 log.45006595._020811.job.log.tgz.1
[2025-06-07 06:45:21] -rw------- 1 boinc boinc      7711 Jun  7 06:45 heartbeat.json
[2025-06-07 06:45:21] -rw------- 1 boinc boinc      5015 Jun  7 06:45 pilotlog.txt
[2025-06-07 06:45:21] -rw------- 1 boinc boinc    473791 Jun  7 06:45 log.45006595._020811.job.log.1
[2025-06-07 06:45:21] -rw------- 1 boinc boinc       357 Jun  7 06:45 output.list
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc       620 Jun  7 06:45 runtime_log
[2025-06-07 06:45:21] -rw------- 1 boinc boinc    727040 Jun  7 06:45 result.tar.gz
[2025-06-07 06:45:21] -rw------- 1 boinc boinc       658 Jun  7 06:45 wP9MDmVOZg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyCiKDmYgpCSn.diag
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc      9025 Jun  7 06:45 runtime_log.err
[2025-06-07 06:45:21] -rw-r--r-- 1 boinc boinc     21381 Jun  7 06:45 stderr.txt
[2025-06-07 06:45:21] HITS file was successfully produced:
[2025-06-07 06:45:21] -rw------- 1 boinc boinc 178768299 Jun  7 06:44 shared/HITS.pool.root.1
[2025-06-07 06:45:21]  *** Contents of shared directory: ***
[2025-06-07 06:45:21] total 387544
[2025-06-07 06:45:21] -rw-r--r-- 2 boinc boinc 216808247 Jun  7 05:27 ATLAS.root_0
[2025-06-07 06:45:21] -rw-r--r-- 2 boinc boinc    508881 Jun  7 05:27 input.tar.gz
[2025-06-07 06:45:21] -rw-r--r-- 2 boinc boinc     15093 Jun  7 05:27 start_atlas.sh
[2025-06-07 06:45:21] -rw------- 1 boinc boinc 178768299 Jun  7 06:44 HITS.pool.root.1
[2025-06-07 06:45:21] -rw------- 1 boinc boinc    727040 Jun  7 06:45 result.tar.gz
06:45:22 (2749394): run_atlas exited; CPU time 17559.395580
06:45:22 (2749394): called boinc_finish(0)

</stderr_txt>
]]>

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