Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:15:25 (2489588): wrapper (7.7.26015): starting
03:15:25 (2489588): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 03:15:25] Arguments: --nthreads 4
[2025-06-05 03:15:25] Threads: 4
[2025-06-05 03:15:25] Checking for CVMFS
[2025-06-05 03:15:25] No cvmfs_config command found, will try listing directly
[2025-06-05 03:15:25] CVMFS is ok
[2025-06-05 03:15:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 03:15:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 03:15:25] Further information can be found at the LHC@home message board.
[2025-06-05 03:15:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:15:25] Checking for apptainer binary...
[2025-06-05 03:15:25] which: no apptainer in ((null))
[2025-06-05 03:15:25] apptainer is not installed, using version from CVMFS
[2025-06-05 03:15:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:15:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-05 03:15:25] apptainer works
[2025-06-05 03:15:25] Set ATHENA_PROC_NUMBER=4
[2025-06-05 03:15:25] Set ATHENA_CORE_NUMBER=4
[2025-06-05 03:15:25] Starting ATLAS job with PandaID=6677472046
[2025-06-05 03:15:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:52:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:52:07] 2025-06-05 03:50:31,161 | INFO     | total number of processed events: 400 (read)
[2025-06-05 05:52:07] 2025-06-05 03:50:31,165 | INFO     | executing command: lscpu
[2025-06-05 05:52:07] 2025-06-05 03:50:31,231 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 05:52:07] 2025-06-05 03:50:32,029 | INFO     | monitor loop #677: job 0:6677472046 is in state 'finished'
[2025-06-05 05:52:07] 2025-06-05 03:50:32,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:52:07] 2025-06-05 03:50:34,532 | INFO     | monitor loop #678: job 0:6677472046 is in state 'finished'
[2025-06-05 05:52:07] 2025-06-05 03:50:34,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:52:07] 2025-06-05 03:50:35,754 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 05:52:07] 2025-06-05 03:50:35,755 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6677472046/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:52:07] 2025-06-05 03:50:35,756 | INFO     | extracted standard info from prmon json
[2025-06-05 05:52:07] 2025-06-05 03:50:35,756 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:52:07] 2025-06-05 03:50:35,756 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:52:07] 2025-06-05 03:50:35,757 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:52:07] 2025-06-05 03:50:35,757 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:52:07] 2025-06-05 03:50:35,761 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:52:07] 2025-06-05 03:50:35,761 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,762 | INFO     | sum of deviations: -15517885587.000004
[2025-06-05 05:52:07] 2025-06-05 03:50:35,762 | INFO     | mean x: 1749090769.5
[2025-06-05 05:52:07] 2025-06-05 03:50:35,762 | INFO     | mean y: 2368721.4342105263
[2025-06-05 05:52:07] 2025-06-05 03:50:35,762 | INFO     | -- intersect: 24928478497.880493
[2025-06-05 05:52:07] 2025-06-05 03:50:35,763 | INFO     | intersect: 24928478497.880493
[2025-06-05 05:52:07] 2025-06-05 03:50:35,763 | INFO     | chi2: 1.694120479747274
[2025-06-05 05:52:07] 2025-06-05 03:50:35,763 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,764 | INFO     | sum of deviations: -14768489424.0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,764 | INFO     | mean x: 1749090617.0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,764 | INFO     | mean y: 2369822.4353741496
[2025-06-05 05:52:07] 2025-06-05 03:50:35,764 | INFO     | -- intersect: 26228732124.726234
[2025-06-05 05:52:07] 2025-06-05 03:50:35,764 | INFO     | intersect: 26228732124.726234
[2025-06-05 05:52:07] 2025-06-05 03:50:35,765 | INFO     | chi2: 1.690148189479875
[2025-06-05 05:52:07] 2025-06-05 03:50:35,765 | INFO     | current chi2=1.690148189479875 (change=0.23447507511339746 %)
[2025-06-05 05:52:07] 2025-06-05 03:50:35,765 | INFO     | right removable region: 146
[2025-06-05 05:52:07] 2025-06-05 03:50:35,765 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,766 | INFO     | sum of deviations: -35980096405.99999
[2025-06-05 05:52:07] 2025-06-05 03:50:35,766 | INFO     | mean x: 1749090922.0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,766 | INFO     | mean y: 2398199.31292517
[2025-06-05 05:52:07] 2025-06-05 03:50:35,766 | INFO     | -- intersect: 63897030986.0526
[2025-06-05 05:52:07] 2025-06-05 03:50:35,766 | INFO     | intersect: 63897030986.0526
[2025-06-05 05:52:07] 2025-06-05 03:50:35,767 | INFO     | chi2: 0.17675096275660046
[2025-06-05 05:52:07] 2025-06-05 03:50:35,767 | INFO     | current chi2=0.17675096275660046 (change=89.56680089346611 %)
[2025-06-05 05:52:07] 2025-06-05 03:50:35,767 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 05:52:07] 2025-06-05 03:50:35,768 | INFO     | sum of deviations: -29981734606.0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,768 | INFO     | mean x: 1749091074.5
[2025-06-05 05:52:07] 2025-06-05 03:50:35,768 | INFO     | mean y: 2388745.3943661973
[2025-06-05 05:52:07] 2025-06-05 03:50:35,768 | INFO     | -- intersect: 59069707950.32918
[2025-06-05 05:52:07] 2025-06-05 03:50:35,768 | INFO     | intersect: 59069707950.32918
[2025-06-05 05:52:07] 2025-06-05 03:50:35,769 | INFO     | chi2: 0.16269740384804462
[2025-06-05 05:52:07] 2025-06-05 03:50:35,769 | INFO     | current chi2=0.16269740384804462 (change=7.951050839767508 %)
[2025-06-05 05:52:07] 2025-06-05 03:50:35,769 | INFO     | left removable region: 20
[2025-06-05 05:52:07] 2025-06-05 03:50:35,770 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 05:52:07] 2025-06-05 03:50:35,770 | INFO     | sum of deviations: -19797036746.0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,770 | INFO     | mean x: 1749091196.5
[2025-06-05 05:52:07] 2025-06-05 03:50:35,770 | INFO     | mean y: 2374237.9365079366
[2025-06-05 05:52:07] 2025-06-05 03:50:35,771 | INFO     | -- intersect: 55830100457.806335
[2025-06-05 05:52:07] 2025-06-05 03:50:35,771 | INFO     | intersect: 55830100457.806335
[2025-06-05 05:52:07] 2025-06-05 03:50:35,771 | INFO     | chi2: 0.12771553627314333
[2025-06-05 05:52:07] 2025-06-05 03:50:35,771 | INFO     | -- intersect: 55830100457.806335
[2025-06-05 05:52:07] 2025-06-05 03:50:35,771 | INFO     | current memory leak: -31.92 B/s (using 126 data points, chi2=0.13)
[2025-06-05 05:52:07] 2025-06-05 03:50:35,772 | INFO     | ..............................
[2025-06-05 05:52:07] 2025-06-05 03:50:35,772 | INFO     | . Timing measurements:
[2025-06-05 05:52:07] 2025-06-05 03:50:35,772 | INFO     | . get job = 0 s
[2025-06-05 05:52:07] 2025-06-05 03:50:35,772 | INFO     | . initial setup = 1 s
[2025-06-05 05:52:07] 2025-06-05 03:50:35,772 | INFO     | . payload setup = 7 s
[2025-06-05 05:52:07] 2025-06-05 03:50:35,772 | INFO     | . stage-in = 0 s
[2025-06-05 05:52:07] 2025-06-05 03:50:35,773 | INFO     | . payload execution = 9266 s
[2025-06-05 05:52:07] 2025-06-05 03:50:35,773 | INFO     | . stage-out = 0 s
[2025-06-05 05:52:07] 2025-06-05 03:50:35,773 | INFO     | . log creation = 0 s
[2025-06-05 05:52:07] 2025-06-05 03:50:35,773 | INFO     | ..............................
[2025-06-05 05:52:07] 2025-06-05 03:50:35,883 | INFO     | 
[2025-06-05 05:52:07] 2025-06-05 03:50:35,883 | INFO     | job summary report
[2025-06-05 05:52:07] 2025-06-05 03:50:35,883 | INFO     | --------------------------------------------------
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | PanDA job id: 6677472046
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | task id: 45006595
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | errors: (none)
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | pilot state: finished 
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | transexitcode: 0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | exeerrorcode: 0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | exeerrordiag: 
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | exitcode: 0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | exitmsg: OK
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | cpuconsumptiontime: 35438 s
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | nevents: 400
[2025-06-05 05:52:07] 2025-06-05 03:50:35,884 | INFO     | neventsw: 0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,885 | INFO     | pid: 2500307
[2025-06-05 05:52:07] 2025-06-05 03:50:35,885 | INFO     | pgrp: 2500307
[2025-06-05 05:52:07] 2025-06-05 03:50:35,885 | INFO     | corecount: 4
[2025-06-05 05:52:07] 2025-06-05 03:50:35,885 | INFO     | event service: False
[2025-06-05 05:52:07] 2025-06-05 03:50:35,885 | INFO     | sizes: {0: 2397180, 1: 2397379, 5: 2397585, 11: 2397641, 9277: 2425705, 9279: 2434852, 9284: 2434966}
[2025-06-05 05:52:07] 2025-06-05 03:50:35,885 | INFO     | --------------------------------------------------
[2025-06-05 05:52:07] 2025-06-05 03:50:35,885 | INFO     | 
[2025-06-05 05:52:07] 2025-06-05 03:50:35,885 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-06-05 05:52:07] 2025-06-05 03:50:35,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,907 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,909 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:52:07] 2025-06-05 03:50:35,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,909 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:52:07] 2025-06-05 03:50:35,909 | INFO     | job 6677472046 has completed (purged errors)
[2025-06-05 05:52:07] 2025-06-05 03:50:35,910 | INFO     | overall cleanup function is called
[2025-06-05 05:52:07] 2025-06-05 03:50:36,918 | INFO     | --- collectZombieJob: --- 10, [2500307]
[2025-06-05 05:52:07] 2025-06-05 03:50:36,918 | INFO     | zombie collector waiting for pid 2500307
[2025-06-05 05:52:07] 2025-06-05 03:50:36,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:52:07] 2025-06-05 03:50:36,919 | INFO     | collected zombie processes
[2025-06-05 05:52:07] 2025-06-05 03:50:36,919 | INFO     | will attempt to kill all subprocesses of pid=2500307
[2025-06-05 05:52:07] 2025-06-05 03:50:37,292 | INFO     | process IDs to be killed: [2500307] (in reverse order)
[2025-06-05 05:52:07] 2025-06-05 03:50:37,409 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:52:07] 2025-06-05 03:50:37,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:52:07] 2025-06-05 03:50:37,422 | INFO     | did not find any defunct processes belonging to 2500307
[2025-06-05 05:52:07] 2025-06-05 03:50:37,435 | INFO     | did not find any defunct processes belonging to 2500307
[2025-06-05 05:52:07] 2025-06-05 03:50:37,436 | INFO     | ready for new job
[2025-06-05 05:52:07] 2025-06-05 03:50:37,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:52:07] 2025-06-05 03:50:37,438 | INFO     | **************************************
[2025-06-05 05:52:07] 2025-06-05 03:50:37,438 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:52:07] 2025-06-05 03:50:37,438 | INFO     | **************************************
[2025-06-05 05:52:07] 2025-06-05 03:50:37,438 | INFO     | 
[2025-06-05 05:52:07] 2025-06-05 03:50:37,442 | INFO     | architecture information:
[2025-06-05 05:52:07] 2025-06-05 03:50:37,442 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:52:07] 2025-06-05 03:50:37,459 | INFO     | cat /etc/os-release:
[2025-06-05 05:52:07] NAME="CentOS Linux"
[2025-06-05 05:52:07] VERSION="7 (Core)"
[2025-06-05 05:52:07] ID="centos"
[2025-06-05 05:52:07] ID_LIKE="rhel fedora"
[2025-06-05 05:52:07] VERSION_ID="7"
[2025-06-05 05:52:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:52:07] ANSI_COLOR="0;31"
[2025-06-05 05:52:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:52:07] HOME_URL="https://www.centos.org/"
[2025-06-05 05:52:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:52:07] 
[2025-06-05 05:52:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:52:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:52:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:52:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:52:07] 
[2025-06-05 05:52:07] 2025-06-05 03:50:37,459 | INFO     | **************************************
[2025-06-05 05:52:07] 2025-06-05 03:50:37,962 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-06-05 05:52:07] 2025-06-05 03:50:37,982 | INFO     | sufficient remaining disk space (656595222528 B)
[2025-06-05 05:52:07] 2025-06-05 03:50:37,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:52:07] 2025-06-05 03:50:37,982 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:52:07] 2025-06-05 03:50:37,982 | INFO     | update_server=False
[2025-06-05 05:52:07] 2025-06-05 03:50:37,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:52:07] 2025-06-05 03:50:37,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:52:07] 2025-06-05 03:50:38,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:52:07] 2025-06-05 03:50:38,041 | INFO     | aborting loop
[2025-06-05 05:52:07] 2025-06-05 03:50:38,544 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:52:07] 2025-06-05 03:50:38,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:52:07] 2025-06-05 03:50:38,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:52:07] 2025-06-05 03:50:38,651 | INFO     | all data control threads have been joined
[2025-06-05 05:52:07] 2025-06-05 03:50:38,988 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:39,046 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:39,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:52:07] 2025-06-05 03:50:39,089 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:39,285 | INFO     | all payload control threads have been joined
[2025-06-05 05:52:07] 2025-06-05 03:50:39,295 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:39,410 | INFO     | [job] validate thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:39,450 | INFO     | all job control threads have been joined
[2025-06-05 05:52:07] 2025-06-05 03:50:39,558 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:39,657 | INFO     | [data] control thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:39,921 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:40,099 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:40,291 | INFO     | [payload] control thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:40,419 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:40,456 | INFO     | [job] control thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:40,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:52:07] 2025-06-05 03:50:41,060 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:41,898 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:41,988 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:48,216 | INFO     | job.realtimelogging is not enabled
[2025-06-05 05:52:07] 2025-06-05 03:50:49,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:52:07] 2025-06-05 03:50:49,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22406407669568)>', '<ExcThread(monitor, started 22405827241728)>']
[2025-06-05 05:52:07] 2025-06-05 03:50:50,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:52:07] 2025-06-05 03:50:50,604 | INFO     | [monitor] control thread has ended
[2025-06-05 05:52:07] 2025-06-05 03:50:54,858 | INFO     | all workflow threads have been joined
[2025-06-05 05:52:07] 2025-06-05 03:50:54,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:52:07] 2025-06-05 03:50:54,859 | INFO     | traces error code: 0
[2025-06-05 05:52:07] 2025-06-05 03:50:54,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:52:07] 2025-06-05 03:50:55,028 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:52:07] 2025-06-05 03:50:55,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:52:07] 2025-06-05 03:50:55,035 [wrapper] pilotpid: 2493271
[2025-06-05 05:52:07] 2025-06-05 03:50:55,038 [wrapper] Pilot exit status: 0
[2025-06-05 05:52:07] 2025-06-05 03:50:55,050 [wrapper] pandaids: 6677472046
[2025-06-05 05:52:07] 2025-06-05 03:50:55,122 [wrapper] cleanup supervisor_pilot 2785070 2493272
[2025-06-05 05:52:07] 2025-06-05 03:50:55,126 [wrapper] Test setup, not cleaning
[2025-06-05 05:52:07] 2025-06-05 03:50:55,129 [wrapper] apfmon messages muted
[2025-06-05 05:52:07] 2025-06-05 03:50:55,132 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:52:07] 2025-06-05 03:50:55,135 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:52:07]  *** Error codes and diagnostics ***
[2025-06-05 05:52:07]     "exeErrorCode": 0,
[2025-06-05 05:52:07]     "exeErrorDiag": "",
[2025-06-05 05:52:07]     "pilotErrorCode": 0,
[2025-06-05 05:52:07]     "pilotErrorDiag": "",
[2025-06-05 05:52:07]  *** Listing of results directory ***
[2025-06-05 05:52:07] total 384904
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc    495897 Jun  3 07:38 pilot3.tar.gz
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc      5111 Jun  3 07:44 queuedata.json
[2025-06-05 05:52:07] -rwx------ 1 boinc boinc     37140 Jun  3 07:46 runpilot2-wrapper.sh
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc       100 Jun  5 03:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:52:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 03:15 run_atlas
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc       105 Jun  5 03:15 job.xml
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc      6636 Jun  5 03:15 init_data.xml
[2025-06-05 05:52:07] -rw-r--r-- 2 boinc boinc 214852517 Jun  5 03:15 EVNT.45006593._000856.pool.root.1
[2025-06-05 05:52:07] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:15 start_atlas.sh
[2025-06-05 05:52:07] drwxrwx--x 2 boinc boinc      4096 Jun  5 03:15 shared
[2025-06-05 05:52:07] -rw-r--r-- 2 boinc boinc    508882 Jun  5 03:15 input.tar.gz
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc         0 Jun  5 03:15 boinc_lockfile
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc      2524 Jun  5 03:15 pandaJob.out
[2025-06-05 05:52:07] -rw------- 1 boinc boinc    987109 Jun  5 03:15 agis_schedconf.cvmfs.json
[2025-06-05 05:52:07] -rw------- 1 boinc boinc   1598969 Jun  5 03:15 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:52:07] drwx------ 4 boinc boinc      4096 Jun  5 03:15 pilot3
[2025-06-05 05:52:07] -rw------- 1 boinc boinc 173078451 Jun  5 05:49 HITS.45006595._021403.pool.root.1
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc       528 Jun  5 05:49 boinc_task_state.xml
[2025-06-05 05:52:07] -rw------- 1 boinc boinc        95 Jun  5 05:50 pilot_heartbeat.json
[2025-06-05 05:52:07] -rw------- 1 boinc boinc      1034 Jun  5 05:50 memory_monitor_summary.json
[2025-06-05 05:52:07] -rw------- 1 boinc boinc    305253 Jun  5 05:50 log.45006595._021403.job.log.tgz.1
[2025-06-05 05:52:07] -rw------- 1 boinc boinc      7724 Jun  5 05:50 heartbeat.json
[2025-06-05 05:52:07] -rw------- 1 boinc boinc      4435 Jun  5 05:50 pilotlog.txt
[2025-06-05 05:52:07] -rw------- 1 boinc boinc    881458 Jun  5 05:50 log.45006595._021403.job.log.1
[2025-06-05 05:52:07] -rw------- 1 boinc boinc       357 Jun  5 05:50 output.list
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc       620 Jun  5 05:50 runtime_log
[2025-06-05 05:52:07] -rw------- 1 boinc boinc   1208320 Jun  5 05:50 result.tar.gz
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc      9025 Jun  5 05:50 runtime_log.err
[2025-06-05 05:52:07] -rw------- 1 boinc boinc       662 Jun  5 05:50 RZkLDmGfZg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzHiKDmIIYXom.diag
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc      8192 Jun  5 05:52 boinc_mmap_file
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc        26 Jun  5 05:52 wrapper_checkpoint.txt
[2025-06-05 05:52:07] -rw-r--r-- 1 boinc boinc     20855 Jun  5 05:52 stderr.txt
[2025-06-05 05:52:07] HITS file was successfully produced:
[2025-06-05 05:52:07] -rw------- 1 boinc boinc 173078451 Jun  5 05:49 shared/HITS.pool.root.1
[2025-06-05 05:52:07]  *** Contents of shared directory: ***
[2025-06-05 05:52:07] total 380548
[2025-06-05 05:52:07] -rw-r--r-- 2 boinc boinc 214852517 Jun  5 03:15 ATLAS.root_0
[2025-06-05 05:52:07] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:15 start_atlas.sh
[2025-06-05 05:52:07] -rw-r--r-- 2 boinc boinc    508882 Jun  5 03:15 input.tar.gz
[2025-06-05 05:52:07] -rw------- 1 boinc boinc 173078451 Jun  5 05:49 HITS.pool.root.1
[2025-06-05 05:52:07] -rw------- 1 boinc boinc   1208320 Jun  5 05:50 result.tar.gz
05:52:09 (2489588): run_atlas exited; CPU time 35793.489618
05:52:09 (2489588): called boinc_finish(0)

</stderr_txt>
]]>

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