Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:59:57 (30221): wrapper (7.7.26015): starting
17:59:57 (30221): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:59:57] Arguments: --nthreads 8
[2025-06-03 17:59:57] Threads: 8
[2025-06-03 17:59:57] Checking for CVMFS
[2025-06-03 17:59:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:59:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:59:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:59:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:59:59] 2.11.2.0 14683 31968 92396 146746 1 241 15780058 25165824 4111 130560 0 16566614 99.789 18859041 2094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:59:59] CVMFS is ok
[2025-06-03 17:59:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:59:59] Checking for apptainer binary...
[2025-06-03 17:59:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:59:59] Running /usr/bin/apptainer --version
[2025-06-03 17:59:59] apptainer version 1.3.2-1.el7
[2025-06-03 17:59:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:00:05] cg-vwn437.simple-grid.lan
[2025-06-03 18:00:05] apptainer works
[2025-06-03 18:00:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:00:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:00:05] Starting ATLAS job with PandaID=6677471706
[2025-06-03 18:00:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:05:58]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:05:58] 2025-06-03 19:56:41,501 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6677471706/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:05:58] 2025-06-03 19:56:41,501 | INFO     | extracted standard info from prmon json
[2025-06-03 22:05:58] 2025-06-03 19:56:41,502 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:05:58] 2025-06-03 19:56:41,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:05:58] 2025-06-03 19:56:41,502 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:05:58] 2025-06-03 19:56:41,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:05:58] 2025-06-03 19:56:41,507 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:05:58] 2025-06-03 19:56:41,518 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,520 | INFO     | sum of deviations: 66084716121.99998
[2025-06-03 22:05:58] 2025-06-03 19:56:41,520 | INFO     | mean x: 1748973790.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,520 | INFO     | mean y: 2434160.787330317
[2025-06-03 22:05:58] 2025-06-03 19:56:41,521 | INFO     | -- intersect: -34530857534.25252
[2025-06-03 22:05:58] 2025-06-03 19:56:41,521 | INFO     | intersect: -34530857534.25252
[2025-06-03 22:05:58] 2025-06-03 19:56:41,521 | INFO     | chi2: 5.717510657192262
[2025-06-03 22:05:58] 2025-06-03 19:56:41,521 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,523 | INFO     | sum of deviations: 78820680970.99998
[2025-06-03 22:05:58] 2025-06-03 19:56:41,524 | INFO     | mean x: 1748973637.5
[2025-06-03 22:05:58] 2025-06-03 19:56:41,524 | INFO     | mean y: 2442725.4166666665
[2025-06-03 22:05:58] 2025-06-03 19:56:41,524 | INFO     | -- intersect: -44113247357.083
[2025-06-03 22:05:58] 2025-06-03 19:56:41,524 | INFO     | intersect: -44113247357.083
[2025-06-03 22:05:58] 2025-06-03 19:56:41,524 | INFO     | chi2: 4.995979198376851
[2025-06-03 22:05:58] 2025-06-03 19:56:41,524 | INFO     | current chi2=4.995979198376851 (change=12.619678424346631 %)
[2025-06-03 22:05:58] 2025-06-03 19:56:41,525 | INFO     | right removable region: 215
[2025-06-03 22:05:58] 2025-06-03 19:56:41,525 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,527 | INFO     | sum of deviations: -7263890491.999998
[2025-06-03 22:05:58] 2025-06-03 19:56:41,527 | INFO     | mean x: 1748973942.5
[2025-06-03 22:05:58] 2025-06-03 19:56:41,527 | INFO     | mean y: 2484456.7592592593
[2025-06-03 22:05:58] 2025-06-03 19:56:41,527 | INFO     | -- intersect: 4068062090.3639536
[2025-06-03 22:05:58] 2025-06-03 19:56:41,528 | INFO     | intersect: 4068062090.3639536
[2025-06-03 22:05:58] 2025-06-03 19:56:41,528 | INFO     | chi2: 1.3199278622843498
[2025-06-03 22:05:58] 2025-06-03 19:56:41,528 | INFO     | current chi2=1.3199278622843498 (change=76.91429117628378 %)
[2025-06-03 22:05:58] 2025-06-03 19:56:41,529 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,530 | INFO     | sum of deviations: -24841858258.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,530 | INFO     | mean x: 1748974095.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,530 | INFO     | mean y: 2496972.317535545
[2025-06-03 22:05:58] 2025-06-03 19:56:41,531 | INFO     | -- intersect: 14918464234.375595
[2025-06-03 22:05:58] 2025-06-03 19:56:41,531 | INFO     | intersect: 14918464234.375595
[2025-06-03 22:05:58] 2025-06-03 19:56:41,531 | INFO     | chi2: 0.8963956434460661
[2025-06-03 22:05:58] 2025-06-03 19:56:41,531 | INFO     | current chi2=0.8963956434460661 (change=32.08752773089374 %)
[2025-06-03 22:05:58] 2025-06-03 19:56:41,532 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 22:05:58] 2025-06-03 19:56:41,540 | INFO     | sum of deviations: -19882095512.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,541 | INFO     | mean x: 1748974247.5
[2025-06-03 22:05:58] 2025-06-03 19:56:41,541 | INFO     | mean y: 2493200.980582524
[2025-06-03 22:05:58] 2025-06-03 19:56:41,541 | INFO     | -- intersect: 12830988510.977953
[2025-06-03 22:05:58] 2025-06-03 19:56:41,541 | INFO     | intersect: 12830988510.977953
[2025-06-03 22:05:58] 2025-06-03 19:56:41,542 | INFO     | chi2: 0.8742452251238323
[2025-06-03 22:05:58] 2025-06-03 19:56:41,542 | INFO     | current chi2=0.8742452251238323 (change=2.4710537678518505 %)
[2025-06-03 22:05:58] 2025-06-03 19:56:41,542 | INFO     | left removable region: 30
[2025-06-03 22:05:58] 2025-06-03 19:56:41,542 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,544 | INFO     | sum of deviations: 4905111443.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,544 | INFO     | mean x: 1748974522.0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,544 | INFO     | mean y: 2494528.8324324326
[2025-06-03 22:05:58] 2025-06-03 19:56:41,544 | INFO     | -- intersect: -4367203666.1132
[2025-06-03 22:05:58] 2025-06-03 19:56:41,544 | INFO     | intersect: -4367203666.1132
[2025-06-03 22:05:58] 2025-06-03 19:56:41,545 | INFO     | chi2: 0.00138623182990996
[2025-06-03 22:05:58] 2025-06-03 19:56:41,545 | INFO     | -- intersect: -4367203666.1132
[2025-06-03 22:05:58] 2025-06-03 19:56:41,545 | INFO     | current memory leak: 2.50 B/s (using 185 data points, chi2=0.00)
[2025-06-03 22:05:58] 2025-06-03 19:56:41,546 | INFO     | ..............................
[2025-06-03 22:05:58] 2025-06-03 19:56:41,546 | INFO     | . Timing measurements:
[2025-06-03 22:05:58] 2025-06-03 19:56:41,546 | INFO     | . get job = 0 s
[2025-06-03 22:05:58] 2025-06-03 19:56:41,546 | INFO     | . initial setup = 11 s
[2025-06-03 22:05:58] 2025-06-03 19:56:41,546 | INFO     | . payload setup = 166 s
[2025-06-03 22:05:58] 2025-06-03 19:56:41,546 | INFO     | . stage-in = 0 s
[2025-06-03 22:05:58] 2025-06-03 19:56:41,546 | INFO     | . payload execution = 13581 s
[2025-06-03 22:05:58] 2025-06-03 19:56:41,546 | INFO     | . stage-out = 3 s
[2025-06-03 22:05:58] 2025-06-03 19:56:41,547 | INFO     | . log creation = 1 s
[2025-06-03 22:05:58] 2025-06-03 19:56:41,547 | INFO     | ..............................
[2025-06-03 22:05:58] 2025-06-03 19:56:41,730 | INFO     | 
[2025-06-03 22:05:58] 2025-06-03 19:56:41,731 | INFO     | job summary report
[2025-06-03 22:05:58] 2025-06-03 19:56:41,731 | INFO     | --------------------------------------------------
[2025-06-03 22:05:58] 2025-06-03 19:56:41,731 | INFO     | PanDA job id: 6677471706
[2025-06-03 22:05:58] 2025-06-03 19:56:41,731 | INFO     | task id: 45006595
[2025-06-03 22:05:58] 2025-06-03 19:56:41,731 | INFO     | errors: (none)
[2025-06-03 22:05:58] 2025-06-03 19:56:41,731 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:05:58] 2025-06-03 19:56:41,731 | INFO     | pilot state: finished 
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | transexitcode: 0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | exeerrorcode: 0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | exeerrordiag: 
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | exitcode: 0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | exitmsg: OK
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | cpuconsumptiontime: 50714 s
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | nevents: 400
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | neventsw: 0
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | pid: 16868
[2025-06-03 22:05:58] 2025-06-03 19:56:41,732 | INFO     | pgrp: 16868
[2025-06-03 22:05:58] 2025-06-03 19:56:41,733 | INFO     | corecount: 8
[2025-06-03 22:05:58] 2025-06-03 19:56:41,733 | INFO     | event service: False
[2025-06-03 22:05:58] 2025-06-03 19:56:41,733 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405238, 12: 2405238, 23: 2405266, 34: 2405294, 45: 2405450, 55: 2405478, 66: 2405506, 77: 2405534, 85: 2405796, 88: 2406104, 13
[2025-06-03 22:05:58] 2025-06-03 19:56:41,733 | INFO     | --------------------------------------------------
[2025-06-03 22:05:58] 2025-06-03 19:56:41,733 | INFO     | 
[2025-06-03 22:05:58] 2025-06-03 19:56:41,733 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-03 22:05:58] 2025-06-03 19:56:42,326 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,326 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,326 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,326 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,328 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:05:58] 2025-06-03 19:56:42,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,328 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:05:58] 2025-06-03 19:56:42,329 | INFO     | job 6677471706 has completed (purged errors)
[2025-06-03 22:05:58] 2025-06-03 19:56:42,329 | INFO     | overall cleanup function is called
[2025-06-03 22:05:58] 2025-06-03 19:56:43,337 | INFO     | --- collectZombieJob: --- 10, [16868]
[2025-06-03 22:05:58] 2025-06-03 19:56:43,338 | INFO     | zombie collector waiting for pid 16868
[2025-06-03 22:05:58] 2025-06-03 19:56:43,338 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:05:58] 2025-06-03 19:56:43,338 | INFO     | collected zombie processes
[2025-06-03 22:05:58] 2025-06-03 19:56:43,338 | INFO     | will attempt to kill all subprocesses of pid=16868
[2025-06-03 22:05:58] 2025-06-03 19:56:43,499 | INFO     | process IDs to be killed: [16868] (in reverse order)
[2025-06-03 22:05:58] 2025-06-03 19:56:44,442 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:05:58] 2025-06-03 19:56:44,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:05:58] 2025-06-03 19:56:44,452 | INFO     | did not find any defunct processes belonging to 16868
[2025-06-03 22:05:58] 2025-06-03 19:56:44,456 | INFO     | did not find any defunct processes belonging to 16868
[2025-06-03 22:05:58] 2025-06-03 19:56:44,456 | INFO     | ready for new job
[2025-06-03 22:05:58] 2025-06-03 19:56:44,456 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:05:58] 2025-06-03 19:56:44,458 | INFO     | **************************************
[2025-06-03 22:05:58] 2025-06-03 19:56:44,458 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:05:58] 2025-06-03 19:56:44,458 | INFO     | **************************************
[2025-06-03 22:05:58] 2025-06-03 19:56:44,459 | INFO     | 
[2025-06-03 22:05:58] 2025-06-03 19:56:44,459 | INFO     | pilot is running in a VM
[2025-06-03 22:05:58] 2025-06-03 19:56:44,459 | INFO     | architecture information:
[2025-06-03 22:05:58] 2025-06-03 19:56:44,476 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:05:58] 2025-06-03 19:56:44,726 | INFO     | cat /etc/os-release:
[2025-06-03 22:05:58] NAME="CentOS Linux"
[2025-06-03 22:05:58] VERSION="7 (Core)"
[2025-06-03 22:05:58] ID="centos"
[2025-06-03 22:05:58] ID_LIKE="rhel fedora"
[2025-06-03 22:05:58] VERSION_ID="7"
[2025-06-03 22:05:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:05:58] ANSI_COLOR="0;31"
[2025-06-03 22:05:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:05:58] HOME_URL="https://www.centos.org/"
[2025-06-03 22:05:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:05:58] 
[2025-06-03 22:05:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:05:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:05:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:05:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:05:58] 
[2025-06-03 22:05:58] 2025-06-03 19:56:44,726 | INFO     | **************************************
[2025-06-03 22:05:58] 2025-06-03 19:56:45,230 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-03 22:05:58] 2025-06-03 19:56:45,509 | INFO     | sufficient remaining disk space (496672702464 B)
[2025-06-03 22:05:58] 2025-06-03 19:56:45,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:05:58] 2025-06-03 19:56:45,510 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:05:58] 2025-06-03 19:56:45,510 | INFO     | update_server=False
[2025-06-03 22:05:58] 2025-06-03 19:56:45,510 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:05:58] 2025-06-03 19:56:45,510 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:05:58] 2025-06-03 19:56:45,511 | INFO     | aborting loop
[2025-06-03 22:05:58] 2025-06-03 19:56:45,577 | INFO     | all data control threads have been joined
[2025-06-03 22:05:58] 2025-06-03 19:56:46,087 | INFO     | all job control threads have been joined
[2025-06-03 22:05:58] 2025-06-03 19:56:46,154 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:05:58] 2025-06-03 19:56:46,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:05:58] 2025-06-03 19:56:46,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:05:58] 2025-06-03 19:56:46,169 | INFO     | all payload control threads have been joined
[2025-06-03 22:05:58] 2025-06-03 19:56:46,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:05:58] 2025-06-03 19:56:46,516 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:46,519 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:46,584 | INFO     | [data] control thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:46,674 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:46,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:05:58] 2025-06-03 19:56:46,870 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:46,954 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:47,094 | INFO     | [job] control thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:47,175 | INFO     | [payload] control thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:47,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:47,594 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:47,750 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:47,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:05:58] 2025-06-03 19:56:47,949 | INFO     | [job] validate thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:48,087 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:48,094 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:48,287 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:51,874 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:05:58] 2025-06-03 19:56:52,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268375222080)>', '<ExcThread(monitor, started 140267709519616)>']
[2025-06-03 22:05:58] 2025-06-03 19:56:53,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:05:58] 2025-06-03 19:56:53,195 | INFO     | [monitor] control thread has ended
[2025-06-03 22:05:58] 2025-06-03 19:56:57,519 | INFO     | all workflow threads have been joined
[2025-06-03 22:05:58] 2025-06-03 19:56:57,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:05:58] 2025-06-03 19:56:57,520 | INFO     | traces error code: 0
[2025-06-03 22:05:58] 2025-06-03 19:56:57,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:05:58] 2025-06-03 19:56:57,881 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:05:58] 2025-06-03 19:56:57,976 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:05:58] 2025-06-03 19:56:58,072 [wrapper] pilotpid: 6237
[2025-06-03 22:05:58] 2025-06-03 19:56:58,163 [wrapper] Pilot exit status: 0
[2025-06-03 22:05:58] 2025-06-03 19:56:58,533 [wrapper] pandaids: 6677471706
[2025-06-03 22:05:58] 2025-06-03 19:56:59,229 [wrapper] cleanup supervisor_pilot 26194 6238
[2025-06-03 22:05:58] 2025-06-03 19:56:59,321 [wrapper] Test setup, not cleaning
[2025-06-03 22:05:58] 2025-06-03 19:56:59,382 [wrapper] apfmon messages muted
[2025-06-03 22:05:58] 2025-06-03 19:56:59,450 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:05:58] 2025-06-03 19:56:59,516 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:05:58]  *** Error codes and diagnostics ***
[2025-06-03 22:05:58]     "exeErrorCode": 0,
[2025-06-03 22:05:58]     "exeErrorDiag": "",
[2025-06-03 22:05:58]     "pilotErrorCode": 0,
[2025-06-03 22:05:58]     "pilotErrorDiag": "",
[2025-06-03 22:05:58]  *** Listing of results directory ***
[2025-06-03 22:05:58] total 390704
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:38 pilot3.tar.gz
[2025-06-03 22:05:58] -rwx------. 1 boinc boinc     37140 Jun  3 07:42 runpilot2-wrapper.sh
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc      5111 Jun  3 07:42 queuedata.json
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:05:58] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:59 run_atlas
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:59 job.xml
[2025-06-03 22:05:58] -rw-r--r--. 2 boinc boinc 213361980 Jun  3 17:59 EVNT.45006593._000847.pool.root.1
[2025-06-03 22:05:58] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:59 shared
[2025-06-03 22:05:58] -rw-r--r--. 2 boinc boinc    508880 Jun  3 17:59 input.tar.gz
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc      6392 Jun  3 17:59 init_data.xml
[2025-06-03 22:05:58] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:59 start_atlas.sh
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:59 boinc_lockfile
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc      2524 Jun  3 18:00 pandaJob.out
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc    982716 Jun  3 18:02 agis_schedconf.cvmfs.json
[2025-06-03 22:05:58] drwx------. 4 boinc boinc      4096 Jun  3 18:03 pilot3
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc 179783606 Jun  3 21:53 HITS.45006595._021161.pool.root.1
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:54 boinc_task_state.xml
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc      1016 Jun  3 21:55 memory_monitor_summary.json
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc   1603667 Jun  3 21:55 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc    374762 Jun  3 21:55 log.45006595._021161.job.log.tgz.1
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc        95 Jun  3 21:56 pilot_heartbeat.json
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc      7688 Jun  3 21:56 heartbeat.json
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc      4416 Jun  3 21:56 pilotlog.txt
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc   1186985 Jun  3 21:56 log.45006595._021161.job.log.1
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc       357 Jun  3 21:57 output.list
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:57 runtime_log
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc   1576960 Jun  3 21:57 result.tar.gz
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc      8659 Jun  3 21:57 runtime_log.err
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc       656 Jun  3 21:57 40hNDmLbZg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLVXKDm2Vhq8n.diag
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc      8192 Jun  3 22:05 boinc_mmap_file
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc        28 Jun  3 22:05 wrapper_checkpoint.txt
[2025-06-03 22:05:58] -rw-r--r--. 1 boinc boinc     20515 Jun  3 22:05 stderr.txt
[2025-06-03 22:05:58] HITS file was successfully produced:
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc 179783606 Jun  3 21:53 shared/HITS.pool.root.1
[2025-06-03 22:05:58]  *** Contents of shared directory: ***
[2025-06-03 22:05:58] total 385992
[2025-06-03 22:05:58] -rw-r--r--. 2 boinc boinc 213361980 Jun  3 17:59 ATLAS.root_0
[2025-06-03 22:05:58] -rw-r--r--. 2 boinc boinc    508880 Jun  3 17:59 input.tar.gz
[2025-06-03 22:05:58] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:59 start_atlas.sh
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc 179783606 Jun  3 21:53 HITS.pool.root.1
[2025-06-03 22:05:58] -rw-------. 1 boinc boinc   1576960 Jun  3 21:57 result.tar.gz
22:06:00 (30221): run_atlas exited; CPU time 50903.005549
22:06:00 (30221): called boinc_finish(0)

</stderr_txt>
]]>

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