Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:13:47 (6507): wrapper (7.7.26015): starting
04:13:47 (6507): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:13:47] Arguments: --nthreads 8
[2025-06-03 04:13:47] Threads: 8
[2025-06-03 04:13:47] Checking for CVMFS
[2025-06-03 04:13:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:13:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:13:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:13:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:13:48] 2.11.2.0 3220 107305 456644 146734 0 417 12805234 18432001 3453 130560 0 481127648 99.116 927300912 34557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 04:13:48] CVMFS is ok
[2025-06-03 04:13:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 04:13:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 04:13:48] Further information can be found at the LHC@home message board.
[2025-06-03 04:13:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:13:48] Checking for apptainer binary...
[2025-06-03 04:13:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:13:48] Running /usr/bin/apptainer --version
[2025-06-03 04:13:48] apptainer version 1.3.2-1.el7
[2025-06-03 04:13:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:13:49] c-211-11.aglt2.org
[2025-06-03 04:13:49] apptainer works
[2025-06-03 04:13:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:13:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:13:49] Starting ATLAS job with PandaID=6677471806
[2025-06-03 04:13:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:51:52]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:51:52]  is_altstaged=None
[2025-06-03 05:51:52]  is_tar=False
[2025-06-03 05:51:52]  lfn=log.45006595._021261.job.log.tgz.1
[2025-06-03 05:51:52]  mtime=0
[2025-06-03 05:51:52]  protocol_id=None
[2025-06-03 05:51:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 05:51:52]  replicas=None
[2025-06-03 05:51:52]  scope=mc23_13p6TeV
[2025-06-03 05:51:52]  status=None
[2025-06-03 05:51:52]  status_code=0
[2025-06-03 05:51:52]  storage_token=
[2025-06-03 05:51:52]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677471806/log.45006595._021261.job.log.tgz.1
[2025-06-03 05:51:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/7e/log.45006595._021261.job.log.tgz.1
[2025-06-03 05:51:52]  workdir=None
[2025-06-03 05:51:52] ]
[2025-06-03 05:51:52] 2025-06-03 09:51:29,563 | INFO     | transferring file log.45006595._021261.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677471806/log.45006595._021261.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 05:51:52] 2025-06-03 09:51:29,563 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677471806/log.45006595._021261.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._021261.job
[2025-06-03 05:51:52] 2025-06-03 09:51:29,576 | INFO     | adding to output.list: log.45006595._021261.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/7e/log.45006595._021261.job.log.tg
[2025-06-03 05:51:52] 2025-06-03 09:51:29,577 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 05:51:52] 2025-06-03 09:51:29,577 | INFO     | summary of transferred files:
[2025-06-03 05:51:52] 2025-06-03 09:51:29,577 | INFO     |  -- lfn=log.45006595._021261.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 05:51:52] 2025-06-03 09:51:29,577 | INFO     | stage-out finished correctly
[2025-06-03 05:51:52] 2025-06-03 09:51:30,938 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 05:51:52] 2025-06-03 09:51:31,167 | WARNING  | process 16764 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 05:51:52] 2025-06-03 09:51:31,168 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677471806/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:51:52] 2025-06-03 09:51:31,278 | INFO     | number of running child processes to parent process 16764: 1
[2025-06-03 05:51:52] 2025-06-03 09:51:31,278 | INFO     | maximum number of monitored processes: 6
[2025-06-03 05:51:52] 2025-06-03 09:51:33,738 | INFO     | job 6677471806 has state=finished
[2025-06-03 05:51:52] 2025-06-03 09:51:33,738 | INFO     | preparing for final server update for job 6677471806 in state='finished'
[2025-06-03 05:51:52] 2025-06-03 09:51:33,738 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:51:52] 2025-06-03 09:51:33,738 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:51:52] 2025-06-03 09:51:33,738 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:51:52] 2025-06-03 09:51:33,738 | INFO     | job 6677471806 has finished - writing final server update
[2025-06-03 05:51:52] 2025-06-03 09:51:33,739 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:51:52] 2025-06-03 09:51:33,741 | INFO     | executing command: lscpu
[2025-06-03 05:51:52] 2025-06-03 09:51:33,781 | INFO     | monitor loop #440: job 0:6677471806 is in state 'finished'
[2025-06-03 05:51:52] 2025-06-03 09:51:33,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:51:52] 2025-06-03 09:51:33,786 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:51:52] 2025-06-03 09:51:36,285 | INFO     | monitor loop #441: job 0:6677471806 is in state 'finished'
[2025-06-03 05:51:52] 2025-06-03 09:51:36,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:51:52] 2025-06-03 09:51:36,933 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 05:51:52] 2025-06-03 09:51:36,934 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677471806/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:51:52] 2025-06-03 09:51:36,935 | INFO     | extracted standard info from prmon json
[2025-06-03 05:51:52] 2025-06-03 09:51:36,935 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:51:52] 2025-06-03 09:51:36,935 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:51:52] 2025-06-03 09:51:36,935 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:51:52] 2025-06-03 09:51:36,935 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:51:52] 2025-06-03 09:51:36,938 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:51:52] 2025-06-03 09:51:36,938 | INFO     | sum of square deviations: 218571540.0
[2025-06-03 05:51:52] 2025-06-03 09:51:36,939 | INFO     | sum of deviations: 1585699331.0000007
[2025-06-03 05:51:52] 2025-06-03 09:51:36,939 | INFO     | mean x: 1748941454.0
[2025-06-03 05:51:52] 2025-06-03 09:51:36,939 | INFO     | mean y: 2475003.786516854
[2025-06-03 05:51:52] 2025-06-03 09:51:36,939 | INFO     | -- intersect: -12685797648.57238
[2025-06-03 05:51:52] 2025-06-03 09:51:36,940 | INFO     | intersect: -12685797648.57238
[2025-06-03 05:51:52] 2025-06-03 09:51:36,940 | INFO     | chi2: 0.0013177480704268496
[2025-06-03 05:51:52] 2025-06-03 09:51:36,940 | INFO     | -- intersect: -12685797648.57238
[2025-06-03 05:51:52] 2025-06-03 09:51:36,940 | INFO     | current memory leak: 7.25 B/s (using 89 data points, chi2=0.00)
[2025-06-03 05:51:52] 2025-06-03 09:51:36,941 | INFO     | ..............................
[2025-06-03 05:51:52] 2025-06-03 09:51:36,941 | INFO     | . Timing measurements:
[2025-06-03 05:51:52] 2025-06-03 09:51:36,941 | INFO     | . get job = 0 s
[2025-06-03 05:51:52] 2025-06-03 09:51:36,941 | INFO     | . initial setup = 2 s
[2025-06-03 05:51:52] 2025-06-03 09:51:36,941 | INFO     | . payload setup = 6 s
[2025-06-03 05:51:52] 2025-06-03 09:51:36,941 | INFO     | . stage-in = 0 s
[2025-06-03 05:51:52] 2025-06-03 09:51:36,942 | INFO     | . payload execution = 5823 s
[2025-06-03 05:51:52] 2025-06-03 09:51:36,942 | INFO     | . stage-out = 0 s
[2025-06-03 05:51:52] 2025-06-03 09:51:36,942 | INFO     | . log creation = 0 s
[2025-06-03 05:51:52] 2025-06-03 09:51:36,942 | INFO     | ..............................
[2025-06-03 05:51:52] 2025-06-03 09:51:37,463 | INFO     | 
[2025-06-03 05:51:52] 2025-06-03 09:51:37,463 | INFO     | job summary report
[2025-06-03 05:51:52] 2025-06-03 09:51:37,463 | INFO     | --------------------------------------------------
[2025-06-03 05:51:52] 2025-06-03 09:51:37,463 | INFO     | PanDA job id: 6677471806
[2025-06-03 05:51:52] 2025-06-03 09:51:37,463 | INFO     | task id: 45006595
[2025-06-03 05:51:52] 2025-06-03 09:51:37,463 | INFO     | errors: (none)
[2025-06-03 05:51:52] 2025-06-03 09:51:37,463 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:51:52] 2025-06-03 09:51:37,464 | INFO     | pilot state: finished 
[2025-06-03 05:51:52] 2025-06-03 09:51:37,464 | INFO     | transexitcode: 0
[2025-06-03 05:51:52] 2025-06-03 09:51:37,464 | INFO     | exeerrorcode: 0
[2025-06-03 05:51:52] 2025-06-03 09:51:37,464 | INFO     | exeerrordiag: 
[2025-06-03 05:51:52] 2025-06-03 09:51:37,464 | INFO     | exitcode: 0
[2025-06-03 05:51:52] 2025-06-03 09:51:37,464 | INFO     | exitmsg: OK
[2025-06-03 05:51:52] 2025-06-03 09:51:37,464 | INFO     | cpuconsumptiontime: 44244 s
[2025-06-03 05:51:52] 2025-06-03 09:51:37,464 | INFO     | nevents: 400
[2025-06-03 05:51:52] 2025-06-03 09:51:37,464 | INFO     | neventsw: 0
[2025-06-03 05:51:52] 2025-06-03 09:51:37,465 | INFO     | pid: 16764
[2025-06-03 05:51:52] 2025-06-03 09:51:37,465 | INFO     | pgrp: 16764
[2025-06-03 05:51:52] 2025-06-03 09:51:37,465 | INFO     | corecount: 8
[2025-06-03 05:51:52] 2025-06-03 09:51:37,465 | INFO     | event service: False
[2025-06-03 05:51:52] 2025-06-03 09:51:37,465 | INFO     | sizes: {0: 2405011, 1: 2405210, 4: 2405416, 11: 2405444, 5833: 2432101, 5834: 2432100, 5835: 2441225, 5836: 2441281, 5842: 2441451}
[2025-06-03 05:51:52] 2025-06-03 09:51:37,465 | INFO     | --------------------------------------------------
[2025-06-03 05:51:52] 2025-06-03 09:51:37,465 | INFO     | 
[2025-06-03 05:51:52] 2025-06-03 09:51:37,465 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 05:51:52] 2025-06-03 09:51:37,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:51:52] 2025-06-03 09:51:37,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:51:52] 2025-06-03 09:51:37,483 | INFO     | job 6677471806 has completed (purged errors)
[2025-06-03 05:51:52] 2025-06-03 09:51:37,484 | INFO     | overall cleanup function is called
[2025-06-03 05:51:52] 2025-06-03 09:51:38,492 | INFO     | --- collectZombieJob: --- 10, [16764]
[2025-06-03 05:51:52] 2025-06-03 09:51:38,492 | INFO     | zombie collector waiting for pid 16764
[2025-06-03 05:51:52] 2025-06-03 09:51:38,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:51:52] 2025-06-03 09:51:38,492 | INFO     | collected zombie processes
[2025-06-03 05:51:52] 2025-06-03 09:51:38,492 | INFO     | will attempt to kill all subprocesses of pid=16764
[2025-06-03 05:51:52] 2025-06-03 09:51:38,679 | INFO     | process IDs to be killed: [16764] (in reverse order)
[2025-06-03 05:51:52] 2025-06-03 09:51:38,729 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:51:52] 2025-06-03 09:51:38,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:51:52] 2025-06-03 09:51:38,734 | INFO     | did not find any defunct processes belonging to 16764
[2025-06-03 05:51:52] 2025-06-03 09:51:38,738 | INFO     | did not find any defunct processes belonging to 16764
[2025-06-03 05:51:52] 2025-06-03 09:51:38,739 | INFO     | ready for new job
[2025-06-03 05:51:52] 2025-06-03 09:51:38,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:51:52] 2025-06-03 09:51:38,740 | INFO     | **************************************
[2025-06-03 05:51:52] 2025-06-03 09:51:38,741 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:51:52] 2025-06-03 09:51:38,741 | INFO     | **************************************
[2025-06-03 05:51:52] 2025-06-03 09:51:38,741 | INFO     | 
[2025-06-03 05:51:52] 2025-06-03 09:51:38,743 | INFO     | architecture information:
[2025-06-03 05:51:52] 2025-06-03 09:51:38,744 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:51:52] 2025-06-03 09:51:38,755 | INFO     | cat /etc/os-release:
[2025-06-03 05:51:52] NAME="CentOS Linux"
[2025-06-03 05:51:52] VERSION="7 (Core)"
[2025-06-03 05:51:52] ID="centos"
[2025-06-03 05:51:52] ID_LIKE="rhel fedora"
[2025-06-03 05:51:52] VERSION_ID="7"
[2025-06-03 05:51:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:51:52] ANSI_COLOR="0;31"
[2025-06-03 05:51:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:51:52] HOME_URL="https://www.centos.org/"
[2025-06-03 05:51:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:51:52] 
[2025-06-03 05:51:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:51:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:51:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:51:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:51:52] 
[2025-06-03 05:51:52] 2025-06-03 09:51:38,756 | INFO     | **************************************
[2025-06-03 05:51:52] 2025-06-03 09:51:39,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 05:51:52] 2025-06-03 09:51:39,271 | INFO     | sufficient remaining disk space (56282316800 B)
[2025-06-03 05:51:52] 2025-06-03 09:51:39,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:51:52] 2025-06-03 09:51:39,272 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:51:52] 2025-06-03 09:51:39,272 | INFO     | update_server=False
[2025-06-03 05:51:52] 2025-06-03 09:51:39,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:51:52] 2025-06-03 09:51:39,272 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 05:51:52] 2025-06-03 09:51:39,273 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:51:52] 2025-06-03 09:51:39,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:51:52] 2025-06-03 09:51:39,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:51:52] 2025-06-03 09:51:39,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:51:52] 2025-06-03 09:51:39,794 | INFO     | aborting loop
[2025-06-03 05:51:52] 2025-06-03 09:51:40,133 | INFO     | all data control threads have been joined
[2025-06-03 05:51:52] 2025-06-03 09:51:40,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:51:52] 2025-06-03 09:51:40,153 | INFO     | all payload control threads have been joined
[2025-06-03 05:51:52] 2025-06-03 09:51:40,235 | INFO     | all job control threads have been joined
[2025-06-03 05:51:52] 2025-06-03 09:51:40,277 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:40,283 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:40,396 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:40,627 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:40,712 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:40,800 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:41,086 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:41,134 | INFO     | [data] control thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:41,158 | INFO     | [payload] control thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:41,204 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:41,240 | INFO     | [job] control thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:41,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:51:52] 2025-06-03 09:51:41,541 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:41,621 | INFO     | [job] validate thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:42,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:51:52] 2025-06-03 09:51:42,149 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:43,038 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:45,538 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:51:52] 2025-06-03 09:51:47,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431303436096)>', '<ExcThread(monitor, started 140430725342976)>']
[2025-06-03 05:51:52] 2025-06-03 09:51:47,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:51:52] 2025-06-03 09:51:47,313 | INFO     | [monitor] control thread has ended
[2025-06-03 05:51:52] 2025-06-03 09:51:52,159 | INFO     | all workflow threads have been joined
[2025-06-03 05:51:52] 2025-06-03 09:51:52,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:51:52] 2025-06-03 09:51:52,177 | INFO     | traces error code: 0
[2025-06-03 05:51:52] 2025-06-03 09:51:52,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:51:52] 2025-06-03 09:51:52,270 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:51:52] 2025-06-03 09:51:52,272 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:51:52] 2025-06-03 09:51:52,274 [wrapper] pilotpid: 10129
[2025-06-03 05:51:52] 2025-06-03 09:51:52,276 [wrapper] Pilot exit status: 0
[2025-06-03 05:51:52] 2025-06-03 09:51:52,284 [wrapper] pandaids: 6677471806
[2025-06-03 05:51:52] 2025-06-03 09:51:52,317 [wrapper] cleanup supervisor_pilot 25464 10130
[2025-06-03 05:51:52] 2025-06-03 09:51:52,320 [wrapper] Test setup, not cleaning
[2025-06-03 05:51:52] 2025-06-03 09:51:52,322 [wrapper] apfmon messages muted
[2025-06-03 05:51:52] 2025-06-03 09:51:52,324 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:51:52] 2025-06-03 09:51:52,326 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:51:52]  *** Error codes and diagnostics ***
[2025-06-03 05:51:52]     "exeErrorCode": 0,
[2025-06-03 05:51:52]     "exeErrorDiag": "",
[2025-06-03 05:51:52]     "pilotErrorCode": 0,
[2025-06-03 05:51:52]     "pilotErrorDiag": "",
[2025-06-03 05:51:52]  *** Listing of results directory ***
[2025-06-03 05:51:52] total 393080
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 01:38 pilot3.tar.gz
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 01:42 queuedata.json
[2025-06-03 05:51:52] -rwx------ 1 boincer umatlas     37140 Jun  3 01:43 runpilot2-wrapper.sh
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas       100 Jun  3 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:51:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 04:13 run_atlas
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas       105 Jun  3 04:13 job.xml
[2025-06-03 05:51:52] -rw-r--r-- 2 boincer umatlas 216696550 Jun  3 04:13 EVNT.45006593._000851.pool.root.1
[2025-06-03 05:51:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 04:13 start_atlas.sh
[2025-06-03 05:51:52] drwxrwx--x 2 boincer umatlas      4096 Jun  3 04:13 shared
[2025-06-03 05:51:52] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 04:13 input.tar.gz
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas         0 Jun  3 04:13 boinc_lockfile
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 04:13 pandaJob.out
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas    985499 Jun  3 04:13 agis_schedconf.cvmfs.json
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas   1603667 Jun  3 04:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:51:52] drwx------ 4 boincer umatlas      4096 Jun  3 04:13 pilot3
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas      6131 Jun  3 05:46 init_data.xml
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas 180228237 Jun  3 05:50 HITS.45006595._021261.pool.root.1
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas        95 Jun  3 05:51 pilot_heartbeat.json
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas       529 Jun  3 05:51 boinc_task_state.xml
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas      1045 Jun  3 05:51 memory_monitor_summary.json
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas        27 Jun  3 05:51 wrapper_checkpoint.txt
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 05:51 boinc_mmap_file
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas    309707 Jun  3 05:51 log.45006595._021261.job.log.tgz.1
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas      7730 Jun  3 05:51 heartbeat.json
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas      4476 Jun  3 05:51 pilotlog.txt
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas    565450 Jun  3 05:51 log.45006595._021261.job.log.1
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas       357 Jun  3 05:51 output.list
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas       620 Jun  3 05:51 runtime_log
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas    890880 Jun  3 05:51 result.tar.gz
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 05:51 runtime_log.err
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas       656 Jun  3 05:51 JQMMDmQcZg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzGiKDmOMrYBo.diag
[2025-06-03 05:51:52] -rw-r--r-- 1 boincer umatlas     21453 Jun  3 05:51 stderr.txt
[2025-06-03 05:51:52] HITS file was successfully produced:
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas 180228237 Jun  3 05:50 shared/HITS.pool.root.1
[2025-06-03 05:51:52]  *** Contents of shared directory: ***
[2025-06-03 05:51:52] total 389024
[2025-06-03 05:51:52] -rw-r--r-- 2 boincer umatlas 216696550 Jun  3 04:13 ATLAS.root_0
[2025-06-03 05:51:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 04:13 start_atlas.sh
[2025-06-03 05:51:52] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 04:13 input.tar.gz
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas 180228237 Jun  3 05:50 HITS.pool.root.1
[2025-06-03 05:51:52] -rw------- 1 boincer umatlas    890880 Jun  3 05:51 result.tar.gz
05:51:54 (6507): run_atlas exited; CPU time 44334.989128
05:51:54 (6507): called boinc_finish(0)

</stderr_txt>
]]>

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