Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:58:31 (29312): wrapper (7.7.26015): starting
17:58:31 (29312): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:58:31] Arguments: --nthreads 8
[2025-06-03 17:58:31] Threads: 8
[2025-06-03 17:58:31] Checking for CVMFS
[2025-06-03 17:58:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:58:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:58:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:58:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:58:33] 2.11.2.0 12147 31978 99972 146746 2 155 20059658 25165825 4097 130560 0 16912148 99.726 19331118 2063 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:58:33] CVMFS is ok
[2025-06-03 17:58:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:58:33] Checking for apptainer binary...
[2025-06-03 17:58:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:58:33] Running /usr/bin/apptainer --version
[2025-06-03 17:58:33] apptainer version 1.3.2-1.el7
[2025-06-03 17:58:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:58:34] cg-vwn304.simple-grid.lan
[2025-06-03 17:58:34] apptainer works
[2025-06-03 17:58:34] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:58:34] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:58:34] Starting ATLAS job with PandaID=6677471819
[2025-06-03 17:58:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:54:59]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:54:59] 2025-06-03 19:43:30,811 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6677471819/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:54:59] 2025-06-03 19:43:30,812 | INFO     | extracted standard info from prmon json
[2025-06-03 23:54:59] 2025-06-03 19:43:30,812 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:54:59] 2025-06-03 19:43:30,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:54:59] 2025-06-03 19:43:30,812 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:54:59] 2025-06-03 19:43:30,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:54:59] 2025-06-03 19:43:30,817 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:54:59] 2025-06-03 19:43:30,818 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 23:54:59] 2025-06-03 19:43:30,820 | INFO     | sum of deviations: -8643080606.000004
[2025-06-03 23:54:59] 2025-06-03 19:43:30,820 | INFO     | mean x: 1748973038.5
[2025-06-03 23:54:59] 2025-06-03 19:43:30,820 | INFO     | mean y: 2488040.7339449544
[2025-06-03 23:54:59] 2025-06-03 19:43:30,820 | INFO     | -- intersect: 4708065335.555763
[2025-06-03 23:54:59] 2025-06-03 19:43:30,820 | INFO     | intersect: 4708065335.555763
[2025-06-03 23:54:59] 2025-06-03 19:43:30,820 | INFO     | chi2: 2.781009153063999
[2025-06-03 23:54:59] 2025-06-03 19:43:30,821 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,822 | INFO     | sum of deviations: 6422148869.000005
[2025-06-03 23:54:59] 2025-06-03 19:43:30,823 | INFO     | mean x: 1748972886.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,823 | INFO     | mean y: 2498480.8497652584
[2025-06-03 23:54:59] 2025-06-03 19:43:30,823 | INFO     | -- intersect: -3745986573.3924775
[2025-06-03 23:54:59] 2025-06-03 19:43:30,823 | INFO     | intersect: -3745986573.3924775
[2025-06-03 23:54:59] 2025-06-03 19:43:30,823 | INFO     | chi2: 1.9599152237823951
[2025-06-03 23:54:59] 2025-06-03 19:43:30,823 | INFO     | current chi2=1.9599152237823951 (change=29.525035125359334 %)
[2025-06-03 23:54:59] 2025-06-03 19:43:30,824 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,825 | INFO     | sum of deviations: 6324424825.500004
[2025-06-03 23:54:59] 2025-06-03 19:43:30,833 | INFO     | mean x: 1748972733.5
[2025-06-03 23:54:59] 2025-06-03 19:43:30,833 | INFO     | mean y: 2498408.543269231
[2025-06-03 23:54:59] 2025-06-03 19:43:30,833 | INFO     | -- intersect: -3961611462.9163117
[2025-06-03 23:54:59] 2025-06-03 19:43:30,833 | INFO     | intersect: -3961611462.9163117
[2025-06-03 23:54:59] 2025-06-03 19:43:30,834 | INFO     | chi2: 1.9605932680924745
[2025-06-03 23:54:59] 2025-06-03 19:43:30,834 | INFO     | current chi2=1.9605932680924745 (change=-0.03459559382220614 %)
[2025-06-03 23:54:59] 2025-06-03 19:43:30,834 | INFO     | right removable region: 207
[2025-06-03 23:54:59] 2025-06-03 19:43:30,834 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,836 | INFO     | sum of deviations: -48498310348.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,836 | INFO     | mean x: 1748973191.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,836 | INFO     | mean y: 2515945.455399061
[2025-06-03 23:54:59] 2025-06-03 19:43:30,836 | INFO     | -- intersect: 28310053952.85436
[2025-06-03 23:54:59] 2025-06-03 19:43:30,837 | INFO     | intersect: 28310053952.85436
[2025-06-03 23:54:59] 2025-06-03 19:43:30,837 | INFO     | chi2: 1.0348693583896673
[2025-06-03 23:54:59] 2025-06-03 19:43:30,837 | INFO     | current chi2=1.0348693583896673 (change=62.787991645065546 %)
[2025-06-03 23:54:59] 2025-06-03 19:43:30,837 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,845 | INFO     | sum of deviations: -46285564323.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,846 | INFO     | mean x: 1748973343.5
[2025-06-03 23:54:59] 2025-06-03 19:43:30,846 | INFO     | mean y: 2514268.451923077
[2025-06-03 23:54:59] 2025-06-03 19:43:30,846 | INFO     | -- intersect: 29014026223.327103
[2025-06-03 23:54:59] 2025-06-03 19:43:30,846 | INFO     | intersect: 29014026223.327103
[2025-06-03 23:54:59] 2025-06-03 19:43:30,846 | INFO     | chi2: 1.0207219357027928
[2025-06-03 23:54:59] 2025-06-03 19:43:30,846 | INFO     | current chi2=1.0207219357027928 (change=1.3670732998500361 %)
[2025-06-03 23:54:59] 2025-06-03 19:43:30,847 | INFO     | left removable region: 20
[2025-06-03 23:54:59] 2025-06-03 19:43:30,847 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,848 | INFO     | sum of deviations: -17171953595.999992
[2025-06-03 23:54:59] 2025-06-03 19:43:30,848 | INFO     | mean x: 1748973313.0
[2025-06-03 23:54:59] 2025-06-03 19:43:30,849 | INFO     | mean y: 2515046.9893048126
[2025-06-03 23:54:59] 2025-06-03 19:43:30,849 | INFO     | -- intersect: 14814459168.497835
[2025-06-03 23:54:59] 2025-06-03 19:43:30,849 | INFO     | intersect: 14814459168.497835
[2025-06-03 23:54:59] 2025-06-03 19:43:30,849 | INFO     | chi2: 0.13046614121598407
[2025-06-03 23:54:59] 2025-06-03 19:43:30,849 | INFO     | -- intersect: 14814459168.497835
[2025-06-03 23:54:59] 2025-06-03 19:43:30,849 | INFO     | current memory leak: -8.47 B/s (using 187 data points, chi2=0.13)
[2025-06-03 23:54:59] 2025-06-03 19:43:30,850 | INFO     | ..............................
[2025-06-03 23:54:59] 2025-06-03 19:43:30,850 | INFO     | . Timing measurements:
[2025-06-03 23:54:59] 2025-06-03 19:43:30,850 | INFO     | . get job = 0 s
[2025-06-03 23:54:59] 2025-06-03 19:43:30,851 | INFO     | . initial setup = 2 s
[2025-06-03 23:54:59] 2025-06-03 19:43:30,851 | INFO     | . payload setup = 16 s
[2025-06-03 23:54:59] 2025-06-03 19:43:30,851 | INFO     | . stage-in = 0 s
[2025-06-03 23:54:59] 2025-06-03 19:43:30,851 | INFO     | . payload execution = 13316 s
[2025-06-03 23:54:59] 2025-06-03 19:43:30,851 | INFO     | . stage-out = 4 s
[2025-06-03 23:54:59] 2025-06-03 19:43:30,851 | INFO     | . log creation = 1 s
[2025-06-03 23:54:59] 2025-06-03 19:43:30,851 | INFO     | ..............................
[2025-06-03 23:54:59] 2025-06-03 19:43:31,010 | INFO     | 
[2025-06-03 23:54:59] 2025-06-03 19:43:31,011 | INFO     | job summary report
[2025-06-03 23:54:59] 2025-06-03 19:43:31,011 | INFO     | --------------------------------------------------
[2025-06-03 23:54:59] 2025-06-03 19:43:31,011 | INFO     | PanDA job id: 6677471819
[2025-06-03 23:54:59] 2025-06-03 19:43:31,011 | INFO     | task id: 45006595
[2025-06-03 23:54:59] 2025-06-03 19:43:31,011 | INFO     | errors: (none)
[2025-06-03 23:54:59] 2025-06-03 19:43:31,011 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:54:59] 2025-06-03 19:43:31,011 | INFO     | pilot state: finished 
[2025-06-03 23:54:59] 2025-06-03 19:43:31,011 | INFO     | transexitcode: 0
[2025-06-03 23:54:59] 2025-06-03 19:43:31,011 | INFO     | exeerrorcode: 0
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | exeerrordiag: 
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | exitcode: 0
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | exitmsg: OK
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | cpuconsumptiontime: 50459 s
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | nevents: 400
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | neventsw: 0
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | pid: 9526
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | pgrp: 9526
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | corecount: 8
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | event service: False
[2025-06-03 23:54:59] 2025-06-03 19:43:31,012 | INFO     | sizes: {0: 2405068, 1: 2405210, 12: 2405210, 15: 2405444, 23: 2405472, 13336: 2435161, 13340: 2444102, 13342: 2444158, 13435: 2444328}
[2025-06-03 23:54:59] 2025-06-03 19:43:31,013 | INFO     | --------------------------------------------------
[2025-06-03 23:54:59] 2025-06-03 19:43:31,013 | INFO     | 
[2025-06-03 23:54:59] 2025-06-03 19:43:31,013 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-03 23:54:59] 2025-06-03 19:43:31,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:54:59] 2025-06-03 19:43:31,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,545 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:54:59] 2025-06-03 19:43:31,545 | INFO     | job 6677471819 has completed (purged errors)
[2025-06-03 23:54:59] 2025-06-03 19:43:31,545 | INFO     | overall cleanup function is called
[2025-06-03 23:54:59] 2025-06-03 19:43:32,555 | INFO     | --- collectZombieJob: --- 10, [9526]
[2025-06-03 23:54:59] 2025-06-03 19:43:32,555 | INFO     | zombie collector waiting for pid 9526
[2025-06-03 23:54:59] 2025-06-03 19:43:32,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:54:59] 2025-06-03 19:43:32,555 | INFO     | collected zombie processes
[2025-06-03 23:54:59] 2025-06-03 19:43:32,555 | INFO     | will attempt to kill all subprocesses of pid=9526
[2025-06-03 23:54:59] 2025-06-03 19:43:32,698 | INFO     | process IDs to be killed: [9526] (in reverse order)
[2025-06-03 23:54:59] 2025-06-03 19:43:33,267 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:54:59] 2025-06-03 19:43:33,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:54:59] 2025-06-03 19:43:33,271 | INFO     | did not find any defunct processes belonging to 9526
[2025-06-03 23:54:59] 2025-06-03 19:43:33,274 | INFO     | did not find any defunct processes belonging to 9526
[2025-06-03 23:54:59] 2025-06-03 19:43:33,274 | INFO     | ready for new job
[2025-06-03 23:54:59] 2025-06-03 19:43:33,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:54:59] 2025-06-03 19:43:33,276 | INFO     | **************************************
[2025-06-03 23:54:59] 2025-06-03 19:43:33,276 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:54:59] 2025-06-03 19:43:33,276 | INFO     | **************************************
[2025-06-03 23:54:59] 2025-06-03 19:43:33,276 | INFO     | 
[2025-06-03 23:54:59] 2025-06-03 19:43:33,277 | INFO     | pilot is running in a VM
[2025-06-03 23:54:59] 2025-06-03 19:43:33,277 | INFO     | architecture information:
[2025-06-03 23:54:59] 2025-06-03 19:43:33,288 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:54:59] 2025-06-03 19:43:33,557 | INFO     | cat /etc/os-release:
[2025-06-03 23:54:59] NAME="CentOS Linux"
[2025-06-03 23:54:59] VERSION="7 (Core)"
[2025-06-03 23:54:59] ID="centos"
[2025-06-03 23:54:59] ID_LIKE="rhel fedora"
[2025-06-03 23:54:59] VERSION_ID="7"
[2025-06-03 23:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:54:59] ANSI_COLOR="0;31"
[2025-06-03 23:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:54:59] HOME_URL="https://www.centos.org/"
[2025-06-03 23:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:54:59] 
[2025-06-03 23:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:54:59] 
[2025-06-03 23:54:59] 2025-06-03 19:43:33,558 | INFO     | **************************************
[2025-06-03 23:54:59] 2025-06-03 19:43:34,061 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-03 23:54:59] 2025-06-03 19:43:34,311 | INFO     | sufficient remaining disk space (497098424320 B)
[2025-06-03 23:54:59] 2025-06-03 19:43:34,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:54:59] 2025-06-03 19:43:34,312 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:54:59] 2025-06-03 19:43:34,312 | INFO     | update_server=False
[2025-06-03 23:54:59] 2025-06-03 19:43:34,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:54:59] 2025-06-03 19:43:34,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:54:59] 2025-06-03 19:43:34,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:54:59] 2025-06-03 19:43:34,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:54:59] 2025-06-03 19:43:34,634 | INFO     | aborting loop
[2025-06-03 23:54:59] 2025-06-03 19:43:34,820 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:54:59] 2025-06-03 19:43:34,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:54:59] 2025-06-03 19:43:34,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:54:59] 2025-06-03 19:43:35,259 | INFO     | all data control threads have been joined
[2025-06-03 23:54:59] 2025-06-03 19:43:35,318 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:35,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:35,420 | INFO     | all payload control threads have been joined
[2025-06-03 23:54:59] 2025-06-03 19:43:35,425 | INFO     | [job] validate thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:35,640 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:35,668 | INFO     | all job control threads have been joined
[2025-06-03 23:54:59] 2025-06-03 19:43:35,827 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:35,858 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:35,870 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:36,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:54:59] 2025-06-03 19:43:36,265 | INFO     | [data] control thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:36,426 | INFO     | [payload] control thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:36,527 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:36,545 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:36,590 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:36,674 | INFO     | [job] control thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:36,738 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:37,031 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:38,580 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:54:59] 2025-06-03 19:43:39,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139848140994368)>', '<ExcThread(monitor, started 139847482205952)>']
[2025-06-03 23:54:59] 2025-06-03 19:43:39,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:54:59] 2025-06-03 19:43:39,851 | INFO     | [monitor] control thread has ended
[2025-06-03 23:54:59] 2025-06-03 19:43:44,672 | INFO     | all workflow threads have been joined
[2025-06-03 23:54:59] 2025-06-03 19:43:44,672 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:54:59] 2025-06-03 19:43:44,672 | INFO     | traces error code: 0
[2025-06-03 23:54:59] 2025-06-03 19:43:44,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:54:59] 2025-06-03 19:43:45,039 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:54:59] 2025-06-03 19:43:45,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:54:59] 2025-06-03 19:43:45,118 [wrapper] pilotpid: 898
[2025-06-03 23:54:59] 2025-06-03 19:43:45,198 [wrapper] Pilot exit status: 0
[2025-06-03 23:54:59] 2025-06-03 19:43:45,534 [wrapper] pandaids: 6677471819
[2025-06-03 23:54:59] 2025-06-03 19:43:45,904 [wrapper] cleanup supervisor_pilot  5895 899
[2025-06-03 23:54:59] 2025-06-03 19:43:46,019 [wrapper] Test setup, not cleaning
[2025-06-03 23:54:59] 2025-06-03 19:43:46,101 [wrapper] apfmon messages muted
[2025-06-03 23:54:59] 2025-06-03 19:43:46,227 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:54:59] 2025-06-03 19:43:46,279 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:54:59]  *** Error codes and diagnostics ***
[2025-06-03 23:54:59]     "exeErrorCode": 0,
[2025-06-03 23:54:59]     "exeErrorDiag": "",
[2025-06-03 23:54:59]     "pilotErrorCode": 0,
[2025-06-03 23:54:59]     "pilotErrorDiag": "",
[2025-06-03 23:54:59]  *** Listing of results directory ***
[2025-06-03 23:54:59] total 397724
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:38 pilot3.tar.gz
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc      5111 Jun  3 07:40 queuedata.json
[2025-06-03 23:54:59] -rwx------. 1 boinc boinc     37140 Jun  3 07:41 runpilot2-wrapper.sh
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:54:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:58 run_atlas
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:58 job.xml
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc      6391 Jun  3 17:58 init_data.xml
[2025-06-03 23:54:59] -rw-r--r--. 2 boinc boinc 216696550 Jun  3 17:58 EVNT.45006593._000851.pool.root.1
[2025-06-03 23:54:59] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:58 start_atlas.sh
[2025-06-03 23:54:59] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:58 shared
[2025-06-03 23:54:59] -rw-r--r--. 2 boinc boinc    508876 Jun  3 17:58 input.tar.gz
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:58 boinc_lockfile
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:58 pandaJob.out
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc    982716 Jun  3 17:58 agis_schedconf.cvmfs.json
[2025-06-03 23:54:59] drwx------. 4 boinc boinc      4096 Jun  3 17:59 pilot3
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc 183645428 Jun  3 21:40 HITS.45006595._021274.pool.root.1
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:40 boinc_task_state.xml
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc      1018 Jun  3 21:41 memory_monitor_summary.json
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc   1603667 Jun  3 21:41 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc    388991 Jun  3 21:41 log.45006595._021274.job.log.tgz.1
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc        95 Jun  3 21:43 pilot_heartbeat.json
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc      7685 Jun  3 21:43 heartbeat.json
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc      4416 Jun  3 21:43 pilotlog.txt
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc   1166712 Jun  3 21:43 log.45006595._021274.job.log.1
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc       357 Jun  3 21:43 output.list
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:43 runtime_log
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc   1576960 Jun  3 21:43 result.tar.gz
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc      8659 Jun  3 21:43 runtime_log.err
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc       656 Jun  3 21:43 hMwLDmPaZg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7UXKDm2RIsBn.diag
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:54 boinc_mmap_file
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc        28 Jun  3 23:54 wrapper_checkpoint.txt
[2025-06-03 23:54:59] -rw-r--r--. 1 boinc boinc     20498 Jun  3 23:54 stderr.txt
[2025-06-03 23:54:59] HITS file was successfully produced:
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc 183645428 Jun  3 21:40 shared/HITS.pool.root.1
[2025-06-03 23:54:59]  *** Contents of shared directory: ***
[2025-06-03 23:54:59] total 393020
[2025-06-03 23:54:59] -rw-r--r--. 2 boinc boinc 216696550 Jun  3 17:58 ATLAS.root_0
[2025-06-03 23:54:59] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:58 start_atlas.sh
[2025-06-03 23:54:59] -rw-r--r--. 2 boinc boinc    508876 Jun  3 17:58 input.tar.gz
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc 183645428 Jun  3 21:40 HITS.pool.root.1
[2025-06-03 23:54:59] -rw-------. 1 boinc boinc   1576960 Jun  3 21:43 result.tar.gz
23:55:01 (29312): run_atlas exited; CPU time 50625.327913
23:55:01 (29312): called boinc_finish(0)

</stderr_txt>
]]>

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