Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:25:46 (21254): wrapper (7.7.26015): starting
17:25:46 (21254): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:25:46] Arguments: --nthreads 8
[2025-06-03 17:25:46] Threads: 8
[2025-06-03 17:25:46] Checking for CVMFS
[2025-06-03 17:25:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:25:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:25:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:25:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:25:48] 2.11.2.0 4192 32127 91792 146746 3 160 14268113 25165824 4639 130560 0 15878669 99.818 17356056 1969 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:25:48] CVMFS is ok
[2025-06-03 17:25:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:25:48] Checking for apptainer binary...
[2025-06-03 17:25:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:25:48] Running /usr/bin/apptainer --version
[2025-06-03 17:25:48] apptainer version 1.3.2-1.el7
[2025-06-03 17:25:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:25:52] cg-vwn295.simple-grid.lan
[2025-06-03 17:25:52] apptainer works
[2025-06-03 17:25:52] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:25:52] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:25:52] Starting ATLAS job with PandaID=6677471302
[2025-06-03 17:25:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:30:18]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:30:18] 2025-06-03 19:27:13,649 | INFO     | extracted standard info from prmon json
[2025-06-03 21:30:18] 2025-06-03 19:27:13,649 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:30:18] 2025-06-03 19:27:13,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:30:18] 2025-06-03 19:27:13,650 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:30:18] 2025-06-03 19:27:13,650 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:30:18] 2025-06-03 19:27:13,655 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:30:18] 2025-06-03 19:27:13,655 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,657 | INFO     | sum of deviations: 70305531517.00002
[2025-06-03 21:30:18] 2025-06-03 19:27:13,657 | INFO     | mean x: 1748971864.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,657 | INFO     | mean y: 2441572.822222222
[2025-06-03 21:30:18] 2025-06-03 19:27:13,657 | INFO     | -- intersect: -34811638133.8976
[2025-06-03 21:30:18] 2025-06-03 19:27:13,658 | INFO     | intersect: -34811638133.8976
[2025-06-03 21:30:18] 2025-06-03 19:27:13,658 | INFO     | chi2: 8.45089763725484
[2025-06-03 21:30:18] 2025-06-03 19:27:13,659 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,660 | INFO     | sum of deviations: 83776606939.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,660 | INFO     | mean x: 1748971711.5
[2025-06-03 21:30:18] 2025-06-03 19:27:13,660 | INFO     | mean y: 2450316.7363636363
[2025-06-03 21:30:18] 2025-06-03 19:27:13,661 | INFO     | -- intersect: -44375583694.93208
[2025-06-03 21:30:18] 2025-06-03 19:27:13,661 | INFO     | intersect: -44375583694.93208
[2025-06-03 21:30:18] 2025-06-03 19:27:13,661 | INFO     | chi2: 7.766255379267013
[2025-06-03 21:30:18] 2025-06-03 19:27:13,661 | INFO     | current chi2=7.766255379267013 (change=8.101414635170336 %)
[2025-06-03 21:30:18] 2025-06-03 19:27:13,661 | INFO     | right removable region: 219
[2025-06-03 21:30:18] 2025-06-03 19:27:13,662 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,663 | INFO     | sum of deviations: -9177145732.000011
[2025-06-03 21:30:18] 2025-06-03 19:27:13,664 | INFO     | mean x: 1748972016.5
[2025-06-03 21:30:18] 2025-06-03 19:27:13,664 | INFO     | mean y: 2494179.518181818
[2025-06-03 21:30:18] 2025-06-03 19:27:13,664 | INFO     | -- intersect: 4863800591.023347
[2025-06-03 21:30:18] 2025-06-03 19:27:13,664 | INFO     | intersect: 4863800591.023347
[2025-06-03 21:30:18] 2025-06-03 19:27:13,664 | INFO     | chi2: 3.2301363248926753
[2025-06-03 21:30:18] 2025-06-03 19:27:13,665 | INFO     | current chi2=3.2301363248926753 (change=61.777594954493594 %)
[2025-06-03 21:30:18] 2025-06-03 19:27:13,665 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,667 | INFO     | sum of deviations: -59056523774.000015
[2025-06-03 21:30:18] 2025-06-03 19:27:13,667 | INFO     | mean x: 1748972169.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,667 | INFO     | mean y: 2528603.9488372095
[2025-06-03 21:30:18] 2025-06-03 19:27:13,667 | INFO     | -- intersect: 33519623574.37507
[2025-06-03 21:30:18] 2025-06-03 19:27:13,667 | INFO     | intersect: 33519623574.37507
[2025-06-03 21:30:18] 2025-06-03 19:27:13,667 | INFO     | chi2: 1.0740963475067076
[2025-06-03 21:30:18] 2025-06-03 19:27:13,668 | INFO     | current chi2=1.0740963475067076 (change=66.74764655506 %)
[2025-06-03 21:30:18] 2025-06-03 19:27:13,668 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 21:30:18] 2025-06-03 19:27:13,670 | INFO     | sum of deviations: -65223037503.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,670 | INFO     | mean x: 1748972321.5
[2025-06-03 21:30:18] 2025-06-03 19:27:13,670 | INFO     | mean y: 2533051.523809524
[2025-06-03 21:30:18] 2025-06-03 19:27:13,670 | INFO     | -- intersect: 39726946828.021706
[2025-06-03 21:30:18] 2025-06-03 19:27:13,670 | INFO     | intersect: 39726946828.021706
[2025-06-03 21:30:18] 2025-06-03 19:27:13,670 | INFO     | chi2: 0.998554233789694
[2025-06-03 21:30:18] 2025-06-03 19:27:13,671 | INFO     | current chi2=0.998554233789694 (change=7.033085429660845 %)
[2025-06-03 21:30:18] 2025-06-03 19:27:13,671 | INFO     | left removable region: 30
[2025-06-03 21:30:18] 2025-06-03 19:27:13,671 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,672 | INFO     | sum of deviations: -31255931581.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,673 | INFO     | mean x: 1748972596.0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,673 | INFO     | mean y: 2529351.185185185
[2025-06-03 21:30:18] 2025-06-03 19:27:13,673 | INFO     | -- intersect: 26115950557.66713
[2025-06-03 21:30:18] 2025-06-03 19:27:13,673 | INFO     | intersect: 26115950557.66713
[2025-06-03 21:30:18] 2025-06-03 19:27:13,673 | INFO     | chi2: 0.18181080080937762
[2025-06-03 21:30:18] 2025-06-03 19:27:13,673 | INFO     | -- intersect: 26115950557.66713
[2025-06-03 21:30:18] 2025-06-03 19:27:13,674 | INFO     | current memory leak: -14.93 B/s (using 189 data points, chi2=0.18)
[2025-06-03 21:30:18] 2025-06-03 19:27:13,674 | INFO     | ..............................
[2025-06-03 21:30:18] 2025-06-03 19:27:13,674 | INFO     | . Timing measurements:
[2025-06-03 21:30:18] 2025-06-03 19:27:13,675 | INFO     | . get job = 0 s
[2025-06-03 21:30:18] 2025-06-03 19:27:13,675 | INFO     | . initial setup = 11 s
[2025-06-03 21:30:18] 2025-06-03 19:27:13,675 | INFO     | . payload setup = 145 s
[2025-06-03 21:30:18] 2025-06-03 19:27:13,675 | INFO     | . stage-in = 0 s
[2025-06-03 21:30:18] 2025-06-03 19:27:13,675 | INFO     | . payload execution = 13853 s
[2025-06-03 21:30:18] 2025-06-03 19:27:13,675 | INFO     | . stage-out = 3 s
[2025-06-03 21:30:18] 2025-06-03 19:27:13,675 | INFO     | . log creation = 1 s
[2025-06-03 21:30:18] 2025-06-03 19:27:13,675 | INFO     | ..............................
[2025-06-03 21:30:18] 2025-06-03 19:27:13,834 | INFO     | 
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | job summary report
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | --------------------------------------------------
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | PanDA job id: 6677471302
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | task id: 45006595
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | errors: (none)
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | pilot state: finished 
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | transexitcode: 0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | exeerrorcode: 0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | exeerrordiag: 
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | exitcode: 0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,835 | INFO     | exitmsg: OK
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | cpuconsumptiontime: 49449 s
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | nevents: 400
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | neventsw: 0
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | pid: 3878
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | pgrp: 3878
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | corecount: 8
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | event service: False
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | sizes: {0: 2404956, 1: 2405211, 12: 2405211, 23: 2405239, 33: 2405267, 44: 2405323, 55: 2405479, 66: 2405507, 76: 2405535, 87: 2405591, 91: 2405825, 98: 2406133, 1
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | --------------------------------------------------
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | 
[2025-06-03 21:30:18] 2025-06-03 19:27:13,836 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 21:30:18] 2025-06-03 19:27:14,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:30:18] 2025-06-03 19:27:14,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:30:18] 2025-06-03 19:27:14,284 | INFO     | job 6677471302 has completed (purged errors)
[2025-06-03 21:30:18] 2025-06-03 19:27:14,284 | INFO     | overall cleanup function is called
[2025-06-03 21:30:18] 2025-06-03 19:27:15,294 | INFO     | --- collectZombieJob: --- 10, [3878]
[2025-06-03 21:30:18] 2025-06-03 19:27:15,294 | INFO     | zombie collector waiting for pid 3878
[2025-06-03 21:30:18] 2025-06-03 19:27:15,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:30:18] 2025-06-03 19:27:15,295 | INFO     | collected zombie processes
[2025-06-03 21:30:18] 2025-06-03 19:27:15,295 | INFO     | will attempt to kill all subprocesses of pid=3878
[2025-06-03 21:30:18] 2025-06-03 19:27:15,418 | INFO     | process IDs to be killed: [3878] (in reverse order)
[2025-06-03 21:30:18] 2025-06-03 19:27:16,325 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:30:18] 2025-06-03 19:27:16,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:30:18] 2025-06-03 19:27:16,328 | INFO     | did not find any defunct processes belonging to 3878
[2025-06-03 21:30:18] 2025-06-03 19:27:16,332 | INFO     | did not find any defunct processes belonging to 3878
[2025-06-03 21:30:18] 2025-06-03 19:27:16,332 | INFO     | ready for new job
[2025-06-03 21:30:18] 2025-06-03 19:27:16,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:30:18] 2025-06-03 19:27:16,340 | INFO     | **************************************
[2025-06-03 21:30:18] 2025-06-03 19:27:16,340 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:30:18] 2025-06-03 19:27:16,340 | INFO     | **************************************
[2025-06-03 21:30:18] 2025-06-03 19:27:16,340 | INFO     | 
[2025-06-03 21:30:18] 2025-06-03 19:27:16,341 | INFO     | pilot is running in a VM
[2025-06-03 21:30:18] 2025-06-03 19:27:16,341 | INFO     | architecture information:
[2025-06-03 21:30:18] 2025-06-03 19:27:16,354 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:30:18] 2025-06-03 19:27:16,668 | INFO     | cat /etc/os-release:
[2025-06-03 21:30:18] NAME="CentOS Linux"
[2025-06-03 21:30:18] VERSION="7 (Core)"
[2025-06-03 21:30:18] ID="centos"
[2025-06-03 21:30:18] ID_LIKE="rhel fedora"
[2025-06-03 21:30:18] VERSION_ID="7"
[2025-06-03 21:30:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:30:18] ANSI_COLOR="0;31"
[2025-06-03 21:30:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:30:18] HOME_URL="https://www.centos.org/"
[2025-06-03 21:30:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:30:18] 
[2025-06-03 21:30:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:30:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:30:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:30:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:30:18] 
[2025-06-03 21:30:18] 2025-06-03 19:27:16,669 | INFO     | **************************************
[2025-06-03 21:30:18] 2025-06-03 19:27:17,172 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 21:30:18] 2025-06-03 19:27:17,468 | INFO     | sufficient remaining disk space (496967352320 B)
[2025-06-03 21:30:18] 2025-06-03 19:27:17,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:30:18] 2025-06-03 19:27:17,468 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:30:18] 2025-06-03 19:27:17,468 | INFO     | update_server=False
[2025-06-03 21:30:18] 2025-06-03 19:27:17,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:30:18] 2025-06-03 19:27:17,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:30:18] 2025-06-03 19:27:17,469 | INFO     | aborting loop
[2025-06-03 21:30:18] 2025-06-03 19:27:17,474 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:30:18] 2025-06-03 19:27:17,475 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:30:18] 2025-06-03 19:27:17,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:30:18] 2025-06-03 19:27:17,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:30:18] 2025-06-03 19:27:17,645 | INFO     | all data control threads have been joined
[2025-06-03 21:30:18] 2025-06-03 19:27:17,810 | INFO     | all payload control threads have been joined
[2025-06-03 21:30:18] 2025-06-03 19:27:18,474 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:18,475 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:18,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:30:18] 2025-06-03 19:27:18,611 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:18,650 | INFO     | [data] control thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:18,652 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:18,816 | INFO     | [payload] control thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:18,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:30:18] 2025-06-03 19:27:18,869 | INFO     | [job] validate thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:19,001 | INFO     | all job control threads have been joined
[2025-06-03 21:30:18] 2025-06-03 19:27:19,038 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:19,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:30:18] 2025-06-03 19:27:19,238 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:19,384 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:19,397 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:19,428 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:19,854 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:20,007 | INFO     | [job] control thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:20,578 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:23,068 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:30:18] 2025-06-03 19:27:24,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046637369152)>', '<ExcThread(monitor, started 140045906331392)>']
[2025-06-03 21:30:18] 2025-06-03 19:27:25,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:30:18] 2025-06-03 19:27:25,523 | INFO     | [monitor] control thread has ended
[2025-06-03 21:30:18] 2025-06-03 19:27:29,751 | INFO     | all workflow threads have been joined
[2025-06-03 21:30:18] 2025-06-03 19:27:29,751 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:30:18] 2025-06-03 19:27:29,752 | INFO     | traces error code: 0
[2025-06-03 21:30:18] 2025-06-03 19:27:29,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:30:18] 2025-06-03 19:27:30,197 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:30:18] 2025-06-03 19:27:30,307 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:30:18] 2025-06-03 19:27:30,436 [wrapper] pilotpid: 27704
[2025-06-03 21:30:18] 2025-06-03 19:27:30,540 [wrapper] Pilot exit status: 0
[2025-06-03 21:30:18] 2025-06-03 19:27:31,047 [wrapper] pandaids: 6677471302
[2025-06-03 21:30:18] 2025-06-03 19:27:31,901 [wrapper] cleanup supervisor_pilot  1239 27705
[2025-06-03 21:30:18] 2025-06-03 19:27:31,929 [wrapper] Test setup, not cleaning
[2025-06-03 21:30:18] 2025-06-03 19:27:31,937 [wrapper] apfmon messages muted
[2025-06-03 21:30:18] 2025-06-03 19:27:32,020 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:30:18] 2025-06-03 19:27:32,116 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:30:18]  *** Error codes and diagnostics ***
[2025-06-03 21:30:18]     "exeErrorCode": 0,
[2025-06-03 21:30:18]     "exeErrorDiag": "",
[2025-06-03 21:30:18]     "pilotErrorCode": 0,
[2025-06-03 21:30:18]     "pilotErrorDiag": "",
[2025-06-03 21:30:18]  *** Listing of results directory ***
[2025-06-03 21:30:18] total 392484
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:14 pilot3.tar.gz
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc      5111 Jun  3 07:33 queuedata.json
[2025-06-03 21:30:18] -rwx------. 1 boinc boinc     37140 Jun  3 07:34 runpilot2-wrapper.sh
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:30:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:25 run_atlas
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:25 job.xml
[2025-06-03 21:30:18] -rw-r--r--. 2 boinc boinc 215863345 Jun  3 17:25 EVNT.45006593._000840.pool.root.1
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc      6392 Jun  3 17:25 init_data.xml
[2025-06-03 21:30:18] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:25 start_atlas.sh
[2025-06-03 21:30:18] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:25 shared
[2025-06-03 21:30:18] -rw-r--r--. 2 boinc boinc    508884 Jun  3 17:25 input.tar.gz
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:25 boinc_lockfile
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:25 pandaJob.out
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc    982716 Jun  3 17:29 agis_schedconf.cvmfs.json
[2025-06-03 21:30:18] drwx------. 4 boinc boinc      4096 Jun  3 17:29 pilot3
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc 178978897 Jun  3 21:24 HITS.45006595._020999.pool.root.1
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:24 boinc_task_state.xml
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc      1020 Jun  3 21:25 memory_monitor_summary.json
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc   1603667 Jun  3 21:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc    395026 Jun  3 21:25 log.45006595._020999.job.log.tgz.1
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc        95 Jun  3 21:26 pilot_heartbeat.json
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc      7696 Jun  3 21:27 heartbeat.json
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc      4540 Jun  3 21:27 pilotlog.txt
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc   1225528 Jun  3 21:27 log.45006595._020999.job.log.1
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc       357 Jun  3 21:27 output.list
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:27 runtime_log
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc   1638400 Jun  3 21:27 result.tar.gz
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc      8673 Jun  3 21:27 runtime_log.err
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc       656 Jun  3 21:27 9YiMDmOTZg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWEiKDmGvtY8n.diag
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:30 boinc_mmap_file
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:30 wrapper_checkpoint.txt
[2025-06-03 21:30:18] -rw-r--r--. 1 boinc boinc     20492 Jun  3 21:30 stderr.txt
[2025-06-03 21:30:18] HITS file was successfully produced:
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc 178978897 Jun  3 21:24 shared/HITS.pool.root.1
[2025-06-03 21:30:18]  *** Contents of shared directory: ***
[2025-06-03 21:30:18] total 387712
[2025-06-03 21:30:18] -rw-r--r--. 2 boinc boinc 215863345 Jun  3 17:25 ATLAS.root_0
[2025-06-03 21:30:18] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:25 start_atlas.sh
[2025-06-03 21:30:18] -rw-r--r--. 2 boinc boinc    508884 Jun  3 17:25 input.tar.gz
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc 178978897 Jun  3 21:24 HITS.pool.root.1
[2025-06-03 21:30:18] -rw-------. 1 boinc boinc   1638400 Jun  3 21:27 result.tar.gz
21:30:20 (21254): run_atlas exited; CPU time 49640.024272
21:30:20 (21254): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN