Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:11:34 (2418135): wrapper (7.7.26015): starting
04:11:34 (2418135): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:11:34] Arguments: --nthreads 8
[2025-06-03 04:11:34] Threads: 8
[2025-06-03 04:11:34] Checking for CVMFS
[2025-06-03 04:11:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:11:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:11:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:11:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:11:34] 2.12.6.0 1144154 22046 405800 146734 0 187 27977057 32935936 9840 16776704 0 109969250 99.645 104374020 27775 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 04:11:34] CVMFS is ok
[2025-06-03 04:11:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 04:11:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 04:11:34] Further information can be found at the LHC@home message board.
[2025-06-03 04:11:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:11:34] Checking for apptainer binary...
[2025-06-03 04:11:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:11:34] Running /usr/bin/apptainer --version
[2025-06-03 04:11:34] apptainer version 1.4.1-1.el9
[2025-06-03 04:11:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:11:35] c6-8-25-4.aglt2.org
[2025-06-03 04:11:35] apptainer works
[2025-06-03 04:11:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:11:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:11:35] Starting ATLAS job with PandaID=6677471197
[2025-06-03 04:11:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:36:23]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:36:23]  protocol_id=None
[2025-06-03 05:36:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 05:36:23]  replicas=None
[2025-06-03 05:36:23]  scope=mc23_13p6TeV
[2025-06-03 05:36:23]  status=None
[2025-06-03 05:36:23]  status_code=0
[2025-06-03 05:36:23]  storage_token=
[2025-06-03 05:36:23]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-6677471197/log.45006595._020894.job.log.tgz.1
[2025-06-03 05:36:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/75/log.45006595._020894.job.log.tgz.1
[2025-06-03 05:36:23]  workdir=None
[2025-06-03 05:36:23] ]
[2025-06-03 05:36:23] 2025-06-03 09:35:54,258 | INFO     | transferring file log.45006595._020894.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-6677471197/log.45006595._020894.job.log.tgz.1 to /tmp/boinchome/slots
[2025-06-03 05:36:23] 2025-06-03 09:35:54,259 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-6677471197/log.45006595._020894.job.log.tgz.1 /tmp/boinchome/slots/10/log.45006595._020894.j
[2025-06-03 05:36:23] 2025-06-03 09:35:54,276 | INFO     | adding to output.list: log.45006595._020894.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/75/log.45006595._020894.job.log.tg
[2025-06-03 05:36:23] 2025-06-03 09:35:54,277 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 05:36:23] 2025-06-03 09:35:54,277 | INFO     | summary of transferred files:
[2025-06-03 05:36:23] 2025-06-03 09:35:54,277 | INFO     |  -- lfn=log.45006595._020894.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 05:36:23] 2025-06-03 09:35:54,277 | INFO     | stage-out finished correctly
[2025-06-03 05:36:23] 2025-06-03 09:35:55,768 | INFO     | monitor loop #366: job 0:6677471197 is in state 'finished'
[2025-06-03 05:36:23] 2025-06-03 09:35:55,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:36:23] 2025-06-03 09:35:57,083 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 05:36:23] 2025-06-03 09:35:58,271 | INFO     | monitor loop #367: job 0:6677471197 is in state 'finished'
[2025-06-03 05:36:23] 2025-06-03 09:35:58,272 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:36:23] 2025-06-03 09:35:59,641 | INFO     | job 6677471197 has state=finished
[2025-06-03 05:36:23] 2025-06-03 09:35:59,641 | INFO     | preparing for final server update for job 6677471197 in state='finished'
[2025-06-03 05:36:23] 2025-06-03 09:35:59,642 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:36:23] 2025-06-03 09:35:59,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:36:23] 2025-06-03 09:35:59,642 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:36:23] 2025-06-03 09:35:59,642 | INFO     | job 6677471197 has finished - writing final server update
[2025-06-03 05:36:23] 2025-06-03 09:35:59,642 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:36:23] 2025-06-03 09:35:59,659 | INFO     | executing command: lscpu
[2025-06-03 05:36:23] 2025-06-03 09:35:59,733 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:36:23] 2025-06-03 09:36:00,774 | INFO     | monitor loop #368: job 0:6677471197 is in state 'finished'
[2025-06-03 05:36:23] 2025-06-03 09:36:00,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:36:23] 2025-06-03 09:36:02,277 | INFO     | 5061s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 05:36:23] 2025-06-03 09:36:03,277 | INFO     | monitor loop #369: job 0:6677471197 is in state 'finished'
[2025-06-03 05:36:23] 2025-06-03 09:36:03,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:36:23] 2025-06-03 09:36:03,361 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 05:36:23] 2025-06-03 09:36:03,361 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6677471197/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:36:23] 2025-06-03 09:36:03,362 | INFO     | extracted standard info from prmon json
[2025-06-03 05:36:23] 2025-06-03 09:36:03,363 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:36:23] 2025-06-03 09:36:03,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:36:23] 2025-06-03 09:36:03,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:36:23] 2025-06-03 09:36:03,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:36:23] 2025-06-03 09:36:03,365 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:36:23] 2025-06-03 09:36:03,365 | INFO     | sum of square deviations: 136095575.0
[2025-06-03 05:36:23] 2025-06-03 09:36:03,366 | INFO     | sum of deviations: 10298403049.5
[2025-06-03 05:36:23] 2025-06-03 09:36:03,366 | INFO     | mean x: 1748940920.5
[2025-06-03 05:36:23] 2025-06-03 09:36:03,366 | INFO     | mean y: 2112048.697368421
[2025-06-03 05:36:23] 2025-06-03 09:36:03,366 | INFO     | -- intersect: -132340901374.57181
[2025-06-03 05:36:23] 2025-06-03 09:36:03,366 | INFO     | intersect: -132340901374.57181
[2025-06-03 05:36:23] 2025-06-03 09:36:03,366 | INFO     | chi2: 1.014774887498004
[2025-06-03 05:36:23] 2025-06-03 09:36:03,366 | INFO     | -- intersect: -132340901374.57181
[2025-06-03 05:36:23] 2025-06-03 09:36:03,367 | INFO     | current memory leak: 75.67 B/s (using 76 data points, chi2=1.01)
[2025-06-03 05:36:23] 2025-06-03 09:36:03,367 | INFO     | ..............................
[2025-06-03 05:36:23] 2025-06-03 09:36:03,367 | INFO     | . Timing measurements:
[2025-06-03 05:36:23] 2025-06-03 09:36:03,367 | INFO     | . get job = 0 s
[2025-06-03 05:36:23] 2025-06-03 09:36:03,367 | INFO     | . initial setup = 2 s
[2025-06-03 05:36:23] 2025-06-03 09:36:03,368 | INFO     | . payload setup = 5 s
[2025-06-03 05:36:23] 2025-06-03 09:36:03,368 | INFO     | . stage-in = 0 s
[2025-06-03 05:36:23] 2025-06-03 09:36:03,368 | INFO     | . payload execution = 5024 s
[2025-06-03 05:36:23] 2025-06-03 09:36:03,368 | INFO     | . stage-out = 0 s
[2025-06-03 05:36:23] 2025-06-03 09:36:03,368 | INFO     | . log creation = 0 s
[2025-06-03 05:36:23] 2025-06-03 09:36:03,368 | INFO     | ..............................
[2025-06-03 05:36:23] 2025-06-03 09:36:03,461 | INFO     | 
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | job summary report
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | --------------------------------------------------
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | PanDA job id: 6677471197
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | task id: 45006595
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | errors: (none)
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | pilot state: finished 
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | transexitcode: 0
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | exeerrorcode: 0
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | exeerrordiag: 
[2025-06-03 05:36:23] 2025-06-03 09:36:03,462 | INFO     | exitcode: 0
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | exitmsg: OK
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | cpuconsumptiontime: 34534 s
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | nevents: 400
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | neventsw: 0
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | pid: 2428849
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | pgrp: 2428849
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | corecount: 8
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | event service: False
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | sizes: {0: 2405012, 1: 2405211, 4: 2405417, 11: 2405445, 5033: 2431701, 5036: 2440644, 5038: 2440828, 5045: 2440998}
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | --------------------------------------------------
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | 
[2025-06-03 05:36:23] 2025-06-03 09:36:03,463 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:36:23] 2025-06-03 09:36:03,482 | INFO     | job 6677471197 has completed (purged errors)
[2025-06-03 05:36:23] 2025-06-03 09:36:03,483 | INFO     | overall cleanup function is called
[2025-06-03 05:36:23] 2025-06-03 09:36:04,490 | INFO     | --- collectZombieJob: --- 10, [2428849]
[2025-06-03 05:36:23] 2025-06-03 09:36:04,491 | INFO     | zombie collector waiting for pid 2428849
[2025-06-03 05:36:23] 2025-06-03 09:36:04,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:36:23] 2025-06-03 09:36:04,491 | INFO     | collected zombie processes
[2025-06-03 05:36:23] 2025-06-03 09:36:04,492 | INFO     | will attempt to kill all subprocesses of pid=2428849
[2025-06-03 05:36:23] 2025-06-03 09:36:04,818 | INFO     | process IDs to be killed: [2428849] (in reverse order)
[2025-06-03 05:36:23] 2025-06-03 09:36:04,907 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:36:23] 2025-06-03 09:36:04,907 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:36:23] 2025-06-03 09:36:04,921 | INFO     | did not find any defunct processes belonging to 2428849
[2025-06-03 05:36:23] 2025-06-03 09:36:04,932 | INFO     | did not find any defunct processes belonging to 2428849
[2025-06-03 05:36:23] 2025-06-03 09:36:04,932 | INFO     | ready for new job
[2025-06-03 05:36:23] 2025-06-03 09:36:04,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:36:23] 2025-06-03 09:36:04,934 | INFO     | **************************************
[2025-06-03 05:36:23] 2025-06-03 09:36:04,934 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:36:23] 2025-06-03 09:36:04,935 | INFO     | **************************************
[2025-06-03 05:36:23] 2025-06-03 09:36:04,935 | INFO     | 
[2025-06-03 05:36:23] 2025-06-03 09:36:04,952 | INFO     | architecture information:
[2025-06-03 05:36:23] 2025-06-03 09:36:04,952 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:36:23] 2025-06-03 09:36:04,967 | INFO     | cat /etc/os-release:
[2025-06-03 05:36:23] NAME="CentOS Linux"
[2025-06-03 05:36:23] VERSION="7 (Core)"
[2025-06-03 05:36:23] ID="centos"
[2025-06-03 05:36:23] ID_LIKE="rhel fedora"
[2025-06-03 05:36:23] VERSION_ID="7"
[2025-06-03 05:36:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:36:23] ANSI_COLOR="0;31"
[2025-06-03 05:36:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:36:23] HOME_URL="https://www.centos.org/"
[2025-06-03 05:36:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:36:23] 
[2025-06-03 05:36:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:36:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:36:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:36:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:36:23] 
[2025-06-03 05:36:23] 2025-06-03 09:36:04,967 | INFO     | **************************************
[2025-06-03 05:36:23] 2025-06-03 09:36:05,470 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-06-03 05:36:23] 2025-06-03 09:36:05,484 | INFO     | sufficient remaining disk space (70233620480 B)
[2025-06-03 05:36:23] 2025-06-03 09:36:05,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:36:23] 2025-06-03 09:36:05,485 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:36:23] 2025-06-03 09:36:05,485 | INFO     | update_server=False
[2025-06-03 05:36:23] 2025-06-03 09:36:05,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:36:23] 2025-06-03 09:36:05,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:36:23] 2025-06-03 09:36:05,486 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 05:36:23] 2025-06-03 09:36:05,486 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:36:23] 2025-06-03 09:36:05,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:36:23] 2025-06-03 09:36:05,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:36:23] 2025-06-03 09:36:05,781 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 05:36:23] 2025-06-03 09:36:05,781 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 05:36:23] 2025-06-03 09:36:05,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:36:23] 2025-06-03 09:36:05,782 | INFO     | will abort loop
[2025-06-03 05:36:23] 2025-06-03 09:36:05,846 | INFO     | all payload control threads have been joined
[2025-06-03 05:36:23] 2025-06-03 09:36:05,928 | INFO     | all job control threads have been joined
[2025-06-03 05:36:23] 2025-06-03 09:36:05,944 | INFO     | all data control threads have been joined
[2025-06-03 05:36:23] 2025-06-03 09:36:06,490 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:06,787 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:06,852 | INFO     | [payload] control thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:06,934 | INFO     | [job] control thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:06,946 | INFO     | [data] control thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:07,105 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:07,491 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:07,578 | INFO     | [job] validate thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:07,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:36:23] 2025-06-03 09:36:07,714 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:07,745 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:07,858 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:07,883 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:07,894 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:08,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:36:23] 2025-06-03 09:36:09,475 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:11,686 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:16,329 | INFO     | job.realtimelogging is not enabled
[2025-06-03 05:36:23] 2025-06-03 09:36:17,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:36:23] 2025-06-03 09:36:18,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620051371840)>', '<ExcThread(monitor, started 140619552900864)>']
[2025-06-03 05:36:23] 2025-06-03 09:36:19,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:36:23] 2025-06-03 09:36:19,552 | INFO     | [monitor] control thread has ended
[2025-06-03 05:36:23] 2025-06-03 09:36:23,623 | INFO     | all workflow threads have been joined
[2025-06-03 05:36:23] 2025-06-03 09:36:23,624 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:36:23] 2025-06-03 09:36:23,624 | INFO     | traces error code: 0
[2025-06-03 05:36:23] 2025-06-03 09:36:23,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:36:23] 2025-06-03 09:36:23,769 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:36:23] 2025-06-03 09:36:23,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:36:23] 2025-06-03 09:36:23,775 [wrapper] pilotpid: 2421844
[2025-06-03 05:36:23] 2025-06-03 09:36:23,777 [wrapper] Pilot exit status: 0
[2025-06-03 05:36:23] 2025-06-03 09:36:23,786 [wrapper] pandaids: 6677471197
[2025-06-03 05:36:23] 2025-06-03 09:36:23,848 [wrapper] cleanup supervisor_pilot 2758720 2421845
[2025-06-03 05:36:23] 2025-06-03 09:36:23,851 [wrapper] Test setup, not cleaning
[2025-06-03 05:36:23] 2025-06-03 09:36:23,854 [wrapper] apfmon messages muted
[2025-06-03 05:36:23] 2025-06-03 09:36:23,856 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:36:23] 2025-06-03 09:36:23,858 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:36:23]  *** Error codes and diagnostics ***
[2025-06-03 05:36:23]     "exeErrorCode": 0,
[2025-06-03 05:36:23]     "exeErrorDiag": "",
[2025-06-03 05:36:23]     "pilotErrorCode": 0,
[2025-06-03 05:36:23]     "pilotErrorDiag": "",
[2025-06-03 05:36:23]  *** Listing of results directory ***
[2025-06-03 05:36:23] total 388136
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 01:14 pilot3.tar.gz
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 01:33 queuedata.json
[2025-06-03 05:36:23] -rwx------. 1 boincer umatlas     37140 Jun  3 01:35 runpilot2-wrapper.sh
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas       100 Jun  3 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:36:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 04:11 run_atlas
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas       105 Jun  3 04:11 job.xml
[2025-06-03 05:36:23] -rw-r--r--. 2 boincer umatlas 212936757 Jun  3 04:11 EVNT.45006593._000836.pool.root.1
[2025-06-03 05:36:23] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 04:11 shared
[2025-06-03 05:36:23] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 04:11 input.tar.gz
[2025-06-03 05:36:23] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 04:11 start_atlas.sh
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas         0 Jun  3 04:11 boinc_lockfile
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 04:11 pandaJob.out
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas    985499 Jun  3 04:11 agis_schedconf.cvmfs.json
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas   1603667 Jun  3 04:11 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:36:23] drwx------. 4 boincer umatlas      4096 Jun  3 04:11 pilot3
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas      6859 Jun  3 05:30 init_data.xml
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas 179079808 Jun  3 05:35 HITS.45006595._020894.pool.root.1
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas       529 Jun  3 05:35 boinc_task_state.xml
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas        95 Jun  3 05:35 pilot_heartbeat.json
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas      1061 Jun  3 05:35 memory_monitor_summary.json
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas    309938 Jun  3 05:35 log.45006595._020894.job.log.tgz.1
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas      7714 Jun  3 05:36 heartbeat.json
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas        27 Jun  3 05:36 wrapper_checkpoint.txt
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 05:36 boinc_mmap_file
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas      4735 Jun  3 05:36 pilotlog.txt
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas    489208 Jun  3 05:36 log.45006595._020894.job.log.1
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas       357 Jun  3 05:36 output.list
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas       620 Jun  3 05:36 runtime_log
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas    819200 Jun  3 05:36 result.tar.gz
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas      8678 Jun  3 05:36 runtime_log.err
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas       652 Jun  3 05:36 aviLDmNUZg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnEiKDmvXV1gm.diag
[2025-06-03 05:36:23] -rw-r--r--. 1 boincer umatlas     21760 Jun  3 05:36 stderr.txt
[2025-06-03 05:36:23] HITS file was successfully produced:
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas 179079808 Jun  3 05:35 shared/HITS.pool.root.1
[2025-06-03 05:36:23]  *** Contents of shared directory: ***
[2025-06-03 05:36:23] total 384156
[2025-06-03 05:36:23] -rw-r--r--. 2 boincer umatlas 212936757 Jun  3 04:11 ATLAS.root_0
[2025-06-03 05:36:23] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 04:11 input.tar.gz
[2025-06-03 05:36:23] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 04:11 start_atlas.sh
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas 179079808 Jun  3 05:35 HITS.pool.root.1
[2025-06-03 05:36:23] -rw-------. 1 boincer umatlas    819200 Jun  3 05:36 result.tar.gz
05:36:24 (2418135): run_atlas exited; CPU time 34727.485552
05:36:24 (2418135): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN