Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:54:22 (20202): wrapper (7.7.26015): starting
15:54:22 (20202): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:54:22] Arguments: --nthreads 8
[2025-06-03 15:54:22] Threads: 8
[2025-06-03 15:54:22] Checking for CVMFS
[2025-06-03 15:54:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:54:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:54:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:54:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:54:23] 2.11.2.0 9777 31876 90528 146743 3 207 15667478 25165825 4365 130560 0 16999567 99.878 17252290 1945 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:54:23] CVMFS is ok
[2025-06-03 15:54:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:54:23] Checking for apptainer binary...
[2025-06-03 15:54:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:54:23] Running /usr/bin/apptainer --version
[2025-06-03 15:54:23] apptainer version 1.3.2-1.el7
[2025-06-03 15:54:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:54:25] cg-vwn477.simple-grid.lan
[2025-06-03 15:54:25] apptainer works
[2025-06-03 15:54:25] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:54:25] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:54:25] Starting ATLAS job with PandaID=6677469403
[2025-06-03 15:54:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:48:53]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:48:53] 2025-06-03 17:23:33,861 | INFO     | monitor loop #879: job 0:6677469403 is in state 'finished'
[2025-06-03 19:48:53] 2025-06-03 17:23:33,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:48:53] 2025-06-03 17:23:36,365 | INFO     | monitor loop #880: job 0:6677469403 is in state 'finished'
[2025-06-03 19:48:53] 2025-06-03 17:23:36,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:48:53] 2025-06-03 17:23:38,871 | INFO     | monitor loop #881: job 0:6677469403 is in state 'finished'
[2025-06-03 19:48:53] 2025-06-03 17:23:38,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 19:48:53] 2025-06-03 17:23:39,462 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 19:48:53] 2025-06-03 17:23:39,462 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6677469403/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:48:53] 2025-06-03 17:23:39,463 | INFO     | extracted standard info from prmon json
[2025-06-03 19:48:53] 2025-06-03 17:23:39,463 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:48:53] 2025-06-03 17:23:39,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:48:53] 2025-06-03 17:23:39,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:48:53] 2025-06-03 17:23:39,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:48:53] 2025-06-03 17:23:39,467 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:48:53] 2025-06-03 17:23:39,468 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,469 | INFO     | sum of deviations: -34974590401.00001
[2025-06-03 19:48:53] 2025-06-03 17:23:39,469 | INFO     | mean x: 1748965100.0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,470 | INFO     | mean y: 2570549.60591133
[2025-06-03 19:48:53] 2025-06-03 17:23:39,470 | INFO     | -- intersect: 23584415611.96876
[2025-06-03 19:48:53] 2025-06-03 17:23:39,470 | INFO     | intersect: 23584415611.96876
[2025-06-03 19:48:53] 2025-06-03 17:23:39,470 | INFO     | chi2: 1.8658705884996774
[2025-06-03 19:48:53] 2025-06-03 17:23:39,470 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 19:48:53] 2025-06-03 17:23:39,472 | INFO     | sum of deviations: -33055049903.999992
[2025-06-03 19:48:53] 2025-06-03 17:23:39,472 | INFO     | mean x: 1748964947.5
[2025-06-03 19:48:53] 2025-06-03 17:23:39,472 | INFO     | mean y: 2572119.282828283
[2025-06-03 19:48:53] 2025-06-03 17:23:39,472 | INFO     | -- intersect: 24021632054.27851
[2025-06-03 19:48:53] 2025-06-03 17:23:39,472 | INFO     | intersect: 24021632054.27851
[2025-06-03 19:48:53] 2025-06-03 17:23:39,472 | INFO     | chi2: 1.8640306687804413
[2025-06-03 19:48:53] 2025-06-03 17:23:39,472 | INFO     | current chi2=1.8640306687804413 (change=0.098609181717982 %)
[2025-06-03 19:48:53] 2025-06-03 17:23:39,473 | INFO     | right removable region: 197
[2025-06-03 19:48:53] 2025-06-03 17:23:39,473 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 19:48:53] 2025-06-03 17:23:39,474 | INFO     | sum of deviations: -69827462957.5
[2025-06-03 19:48:53] 2025-06-03 17:23:39,474 | INFO     | mean x: 1748965252.5
[2025-06-03 19:48:53] 2025-06-03 17:23:39,474 | INFO     | mean y: 2598696.227272727
[2025-06-03 19:48:53] 2025-06-03 17:23:39,474 | INFO     | -- intersect: 50741905254.19978
[2025-06-03 19:48:53] 2025-06-03 17:23:39,475 | INFO     | intersect: 50741905254.19978
[2025-06-03 19:48:53] 2025-06-03 17:23:39,475 | INFO     | chi2: 0.22288950939162983
[2025-06-03 19:48:53] 2025-06-03 17:23:39,475 | INFO     | current chi2=0.22288950939162983 (change=88.05439612128446 %)
[2025-06-03 19:48:53] 2025-06-03 17:23:39,475 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,477 | INFO     | sum of deviations: -71698753461.0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,477 | INFO     | mean x: 1748965405.0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,477 | INFO     | mean y: 2600256.9067357513
[2025-06-03 19:48:53] 2025-06-03 17:23:39,477 | INFO     | -- intersect: 56256694013.520035
[2025-06-03 19:48:53] 2025-06-03 17:23:39,477 | INFO     | intersect: 56256694013.520035
[2025-06-03 19:48:53] 2025-06-03 17:23:39,477 | INFO     | chi2: 0.17265298350948505
[2025-06-03 19:48:53] 2025-06-03 17:23:39,477 | INFO     | current chi2=0.17265298350948505 (change=22.53875744052013 %)
[2025-06-03 19:48:53] 2025-06-03 17:23:39,478 | INFO     | left removable region: 20
[2025-06-03 19:48:53] 2025-06-03 17:23:39,478 | INFO     | sum of square deviations: 1719429448.0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,479 | INFO     | sum of deviations: -60636667469.0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,479 | INFO     | mean x: 1748965527.0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,479 | INFO     | mean y: 2595514.627118644
[2025-06-03 19:48:53] 2025-06-03 17:23:39,479 | INFO     | -- intersect: 61680869781.01234
[2025-06-03 19:48:53] 2025-06-03 17:23:39,479 | INFO     | intersect: 61680869781.01234
[2025-06-03 19:48:53] 2025-06-03 17:23:39,480 | INFO     | chi2: 0.16033050688446907
[2025-06-03 19:48:53] 2025-06-03 17:23:39,480 | INFO     | -- intersect: 61680869781.01234
[2025-06-03 19:48:53] 2025-06-03 17:23:39,480 | INFO     | current memory leak: -35.27 B/s (using 177 data points, chi2=0.16)
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | ..............................
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | . Timing measurements:
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | . get job = 0 s
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | . initial setup = 2 s
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | . payload setup = 15 s
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | . stage-in = 0 s
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | . payload execution = 12402 s
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | . stage-out = 3 s
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | . log creation = 1 s
[2025-06-03 19:48:53] 2025-06-03 17:23:39,481 | INFO     | ..............................
[2025-06-03 19:48:53] 2025-06-03 17:23:39,592 | INFO     | 
[2025-06-03 19:48:53] 2025-06-03 17:23:39,592 | INFO     | job summary report
[2025-06-03 19:48:53] 2025-06-03 17:23:39,592 | INFO     | --------------------------------------------------
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | PanDA job id: 6677469403
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | task id: 45006595
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | errors: (none)
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | pilot state: finished 
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | transexitcode: 0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | exeerrorcode: 0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | exeerrordiag: 
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | exitcode: 0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | exitmsg: OK
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | cpuconsumptiontime: 46449 s
[2025-06-03 19:48:53] 2025-06-03 17:23:39,593 | INFO     | nevents: 400
[2025-06-03 19:48:53] 2025-06-03 17:23:39,594 | INFO     | neventsw: 0
[2025-06-03 19:48:53] 2025-06-03 17:23:39,594 | INFO     | pid: 32429
[2025-06-03 19:48:53] 2025-06-03 17:23:39,594 | INFO     | pgrp: 32429
[2025-06-03 19:48:53] 2025-06-03 17:23:39,594 | INFO     | corecount: 8
[2025-06-03 19:48:53] 2025-06-03 17:23:39,594 | INFO     | event service: False
[2025-06-03 19:48:53] 2025-06-03 17:23:39,594 | INFO     | sizes: {0: 2405011, 1: 2405210, 7: 2405416, 12: 2405444, 12421: 2434515, 12422: 2434514, 12426: 2443639, 12429: 2443695, 12516: 2443865}
[2025-06-03 19:48:53] 2025-06-03 17:23:39,594 | INFO     | --------------------------------------------------
[2025-06-03 19:48:53] 2025-06-03 17:23:39,594 | INFO     | 
[2025-06-03 19:48:53] 2025-06-03 17:23:39,594 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 19:48:53] 2025-06-03 17:23:39,983 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | job 6677469403 has completed (purged errors)
[2025-06-03 19:48:53] 2025-06-03 17:23:39,985 | INFO     | overall cleanup function is called
[2025-06-03 19:48:53] 2025-06-03 17:23:40,995 | INFO     | --- collectZombieJob: --- 10, [32429]
[2025-06-03 19:48:53] 2025-06-03 17:23:40,995 | INFO     | zombie collector waiting for pid 32429
[2025-06-03 19:48:53] 2025-06-03 17:23:40,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:48:53] 2025-06-03 17:23:40,996 | INFO     | collected zombie processes
[2025-06-03 19:48:53] 2025-06-03 17:23:40,996 | INFO     | will attempt to kill all subprocesses of pid=32429
[2025-06-03 19:48:53] 2025-06-03 17:23:41,098 | INFO     | process IDs to be killed: [32429] (in reverse order)
[2025-06-03 19:48:53] 2025-06-03 17:23:42,094 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:48:53] 2025-06-03 17:23:42,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:48:53] 2025-06-03 17:23:42,098 | INFO     | did not find any defunct processes belonging to 32429
[2025-06-03 19:48:53] 2025-06-03 17:23:42,101 | INFO     | did not find any defunct processes belonging to 32429
[2025-06-03 19:48:53] 2025-06-03 17:23:42,101 | INFO     | ready for new job
[2025-06-03 19:48:53] 2025-06-03 17:23:42,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:48:53] 2025-06-03 17:23:42,103 | INFO     | **************************************
[2025-06-03 19:48:53] 2025-06-03 17:23:42,104 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:48:53] 2025-06-03 17:23:42,104 | INFO     | **************************************
[2025-06-03 19:48:53] 2025-06-03 17:23:42,104 | INFO     | 
[2025-06-03 19:48:53] 2025-06-03 17:23:42,104 | INFO     | pilot is running in a VM
[2025-06-03 19:48:53] 2025-06-03 17:23:42,104 | INFO     | architecture information:
[2025-06-03 19:48:53] 2025-06-03 17:23:42,115 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:48:53] 2025-06-03 17:23:42,401 | INFO     | cat /etc/os-release:
[2025-06-03 19:48:53] NAME="CentOS Linux"
[2025-06-03 19:48:53] VERSION="7 (Core)"
[2025-06-03 19:48:53] ID="centos"
[2025-06-03 19:48:53] ID_LIKE="rhel fedora"
[2025-06-03 19:48:53] VERSION_ID="7"
[2025-06-03 19:48:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:48:53] ANSI_COLOR="0;31"
[2025-06-03 19:48:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:48:53] HOME_URL="https://www.centos.org/"
[2025-06-03 19:48:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:48:53] 
[2025-06-03 19:48:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:48:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:48:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:48:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:48:53] 
[2025-06-03 19:48:53] 2025-06-03 17:23:42,401 | INFO     | **************************************
[2025-06-03 19:48:53] 2025-06-03 17:23:42,904 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 19:48:53] 2025-06-03 17:23:43,078 | INFO     | sufficient remaining disk space (496869834752 B)
[2025-06-03 19:48:53] 2025-06-03 17:23:43,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:48:53] 2025-06-03 17:23:43,078 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:48:53] 2025-06-03 17:23:43,078 | INFO     | update_server=False
[2025-06-03 19:48:53] 2025-06-03 17:23:43,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:48:53] 2025-06-03 17:23:43,079 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:48:53] 2025-06-03 17:23:43,080 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:48:53] 2025-06-03 17:23:43,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:48:53] 2025-06-03 17:23:43,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:48:53] 2025-06-03 17:23:43,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:48:53] 2025-06-03 17:23:43,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:48:53] 2025-06-03 17:23:43,085 | INFO     | aborting loop
[2025-06-03 19:48:53] 2025-06-03 17:23:43,178 | INFO     | all job control threads have been joined
[2025-06-03 19:48:53] 2025-06-03 17:23:43,190 | INFO     | all payload control threads have been joined
[2025-06-03 19:48:53] 2025-06-03 17:23:43,846 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:48:53] 2025-06-03 17:23:44,078 | INFO     | all data control threads have been joined
[2025-06-03 19:48:53] 2025-06-03 17:23:44,084 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:44,090 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:44,156 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:44,184 | INFO     | [job] control thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:44,196 | INFO     | [payload] control thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:44,197 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:44,313 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:44,496 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:44,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:48:53] 2025-06-03 17:23:45,083 | INFO     | [data] control thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:45,091 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:45,144 | INFO     | [job] validate thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:45,150 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:45,179 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:45,542 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:45,616 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:47,854 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:48:53] 2025-06-03 17:23:49,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369747351360)>', '<ExcThread(monitor, started 140369152943872)>']
[2025-06-03 19:48:53] 2025-06-03 17:23:50,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:48:53] 2025-06-03 17:23:50,122 | INFO     | [monitor] control thread has ended
[2025-06-03 19:48:53] 2025-06-03 17:23:54,694 | INFO     | all workflow threads have been joined
[2025-06-03 19:48:53] 2025-06-03 17:23:54,694 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:48:53] 2025-06-03 17:23:54,695 | INFO     | traces error code: 0
[2025-06-03 19:48:53] 2025-06-03 17:23:54,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:48:53] 2025-06-03 17:23:54,947 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:48:53] 2025-06-03 17:23:54,993 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:48:53] 2025-06-03 17:23:54,996 [wrapper] pilotpid: 23885
[2025-06-03 19:48:53] 2025-06-03 17:23:55,001 [wrapper] Pilot exit status: 0
[2025-06-03 19:48:53] 2025-06-03 17:23:55,374 [wrapper] pandaids: 6677469403
[2025-06-03 19:48:53] 2025-06-03 17:23:55,957 [wrapper] cleanup supervisor_pilot 25568 23886
[2025-06-03 19:48:53] 2025-06-03 17:23:55,971 [wrapper] Test setup, not cleaning
[2025-06-03 19:48:53] 2025-06-03 17:23:56,032 [wrapper] apfmon messages muted
[2025-06-03 19:48:53] 2025-06-03 17:23:56,099 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:48:53] 2025-06-03 17:23:56,183 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:48:53]  *** Error codes and diagnostics ***
[2025-06-03 19:48:53]     "exeErrorCode": 0,
[2025-06-03 19:48:53]     "exeErrorDiag": "",
[2025-06-03 19:48:53]     "pilotErrorCode": 0,
[2025-06-03 19:48:53]     "pilotErrorDiag": "",
[2025-06-03 19:48:53]  *** Listing of results directory ***
[2025-06-03 19:48:53] total 394060
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc    495897 Jun  3 06:53 pilot3.tar.gz
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc      5111 Jun  3 07:02 queuedata.json
[2025-06-03 19:48:53] -rwx------. 1 boinc boinc     37140 Jun  3 07:02 runpilot2-wrapper.sh
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:48:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:54 run_atlas
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:54 job.xml
[2025-06-03 19:48:53] -rw-r--r--. 2 boinc boinc 213741006 Jun  3 15:54 EVNT.45006593._000804.pool.root.1
[2025-06-03 19:48:53] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:54 start_atlas.sh
[2025-06-03 19:48:53] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:54 shared
[2025-06-03 19:48:53] -rw-r--r--. 2 boinc boinc    508880 Jun  3 15:54 input.tar.gz
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc      6392 Jun  3 15:54 init_data.xml
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:54 boinc_lockfile
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc      2524 Jun  3 15:54 pandaJob.out
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc    982724 Jun  3 15:54 agis_schedconf.cvmfs.json
[2025-06-03 19:48:53] drwx------. 4 boinc boinc      4096 Jun  3 15:54 pilot3
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc 183028052 Jun  3 19:20 HITS.45006595._020104.pool.root.1
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc       530 Jun  3 19:21 boinc_task_state.xml
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc      1018 Jun  3 19:22 memory_monitor_summary.json
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc   1603667 Jun  3 19:22 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc    387728 Jun  3 19:22 log.45006595._020104.job.log.tgz.1
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc        95 Jun  3 19:22 pilot_heartbeat.json
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc      7707 Jun  3 19:23 heartbeat.json
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc      4539 Jun  3 19:23 pilotlog.txt
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc   1090264 Jun  3 19:23 log.45006595._020104.job.log.1
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc       357 Jun  3 19:23 output.list
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:23 runtime_log
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc   1495040 Jun  3 19:23 result.tar.gz
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc      8659 Jun  3 19:23 runtime_log.err
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc       656 Jun  3 19:23 l3rKDmHyYg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgQXKDm693Icm.diag
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc      8192 Jun  3 19:48 boinc_mmap_file
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc      1837 Jun  3 19:48 stderr.txt
[2025-06-03 19:48:53] -rw-r--r--. 1 boinc boinc        28 Jun  3 19:48 wrapper_checkpoint.txt
[2025-06-03 19:48:53] HITS file was successfully produced:
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc 183028052 Jun  3 19:20 shared/HITS.pool.root.1
[2025-06-03 19:48:53]  *** Contents of shared directory: ***
[2025-06-03 19:48:53] total 389448
[2025-06-03 19:48:53] -rw-r--r--. 2 boinc boinc 213741006 Jun  3 15:54 ATLAS.root_0
[2025-06-03 19:48:53] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:54 start_atlas.sh
[2025-06-03 19:48:53] -rw-r--r--. 2 boinc boinc    508880 Jun  3 15:54 input.tar.gz
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc 183028052 Jun  3 19:20 HITS.pool.root.1
[2025-06-03 19:48:53] -rw-------. 1 boinc boinc   1495040 Jun  3 19:23 result.tar.gz
19:48:55 (20202): run_atlas exited; CPU time 46591.648994
19:48:55 (20202): called boinc_finish(0)

</stderr_txt>
]]>

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