Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 10:40:50 (24604): Detected: vboxwrapper 26206
2025-06-04 10:40:50 (24604): Detected: BOINC client v8.0.2
2025-06-04 10:40:52 (24604): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-06-04 10:40:53 (24604): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 10:40:54 (24604): Create VM. (boinc_50e636d3adf53431, slot#0)
2025-06-04 10:40:54 (24604): Setting Memory Size for VM. (4800MB)
2025-06-04 10:40:54 (24604): Setting CPU Count for VM. (8)
2025-06-04 10:40:55 (24604): Setting Chipset Options for VM.
2025-06-04 10:40:55 (24604): Setting Graphics Controller Options for VM.
2025-06-04 10:40:55 (24604): Setting Boot Options for VM.
2025-06-04 10:40:55 (24604): Setting Network Configuration for NAT.
2025-06-04 10:40:56 (24604): Enabling VM Network Access.
2025-06-04 10:40:56 (24604): Disabling USB Support for VM.
2025-06-04 10:40:56 (24604): Disabling COM Port Support for VM.
2025-06-04 10:40:56 (24604): Disabling LPT Port Support for VM.
2025-06-04 10:40:57 (24604): Disabling Audio Support for VM.
2025-06-04 10:40:57 (24604): Disabling Clipboard Support for VM.
2025-06-04 10:40:57 (24604): Disabling Drag and Drop Support for VM.
2025-06-04 10:40:58 (24604): Adding storage controller(s) to VM.
2025-06-04 10:40:58 (24604): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 10:41:01 (24604): Adding VirtualBox Guest Additions to VM.
2025-06-04 10:41:01 (24604): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 10:41:01 (24604): forwarding host port 9662 to guest port 80
2025-06-04 10:41:02 (24604): Enabling remote desktop for VM.
2025-06-04 10:41:02 (24604): Required extension pack not installed, remote desktop not enabled.
2025-06-04 10:41:02 (24604): Enabling shared directory for VM.
2025-06-04 10:41:02 (24604): Starting VM using VBoxManage interface. (boinc_50e636d3adf53431, slot#0)
2025-06-04 10:41:13 (24604): Successfully started VM. (PID = '15876')
2025-06-04 10:41:13 (24604): Reporting VM Process ID to BOINC.
2025-06-04 10:41:13 (24604): Guest Log: BIOS: VirtualBox 7.0.22
2025-06-04 10:41:13 (24604): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 10:41:13 (24604): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 10:41:13 (24604): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 10:41:13 (24604): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 10:41:13 (24604): Detected: Web Application Enabled (http://localhost:9662)
2025-06-04 10:41:13 (24604): Preference change detected
2025-06-04 10:41:13 (24604): Setting CPU throttle for VM. (25%)
2025-06-04 10:41:14 (24604): Setting checkpoint interval to 10000 seconds. (Higher value of (Preference: 10000 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 10:41:15 (24604): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 10:41:15 (24604): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 10:41:24 (24604): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 10:41:24 (24604): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 10:41:24 (24604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 10:41:42 (24604): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 10:41:42 (24604): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 10:42:07 (24604): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 10:42:07 (24604): Guest Log: 00:00:00.000274 main     Log opened 2025-06-04T10:42:06.008404000Z
2025-06-04 10:42:07 (24604): Guest Log: 00:00:00.000755 main     OS Product: Linux
2025-06-04 10:42:07 (24604): Guest Log: 00:00:00.000886 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 10:42:07 (24604): Guest Log: 00:00:00.000996 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 10:42:07 (24604): Guest Log: 00:00:00.001106 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 10:42:07 (24604): Guest Log: 00:00:00.001109 main     Process ID: 1388
2025-06-04 10:42:07 (24604): Guest Log: 00:00:00.001111 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 10:42:07 (24604): Guest Log: 00:00:00.003940 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 10:42:07 (24604): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 10:42:07 (24604): Guest Log: [INFO] Mounting shared directory
2025-06-04 10:42:07 (24604): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 10:42:17 (24604): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 10:42:17 (24604): Guest Log: [INFO] Detected branch: prod
2025-06-04 10:42:17 (24604): Guest Log: 00:00:10.007987 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 240 252 000ns (GuestNow=1 749 055 337 255 659 000 ns GuestLast=1 749 033 726 015 407 000 ns fSetTimeLastLoop=true )
2025-06-04 10:42:17 (24604): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 10:42:17 (24604): Guest Log: Copying input files
2025-06-04 10:42:22 (24604): Guest Log: Copied input files into RunAtlas.
2025-06-04 10:42:22 (24604): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 10:42:22 (24604): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 10:42:22 (24604): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 10:42:22 (24604): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 10:42:35 (24604): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 10:42:35 (24604): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 10:42:35 (24604): Guest Log: 2.6.3.0 1675 0 32040 146788 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 10:42:37 (24604): Guest Log: copied the webapp to /var/www
2025-06-04 10:42:37 (24604): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 10:42:37 (24604): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 10:42:37 (24604): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 10:42:37 (24604): Guest Log:  *** Starting ATLAS job. (PandaID=6677471149 taskID=45006595) ***
2025-06-04 12:21:17 (24604): Status Report: Elapsed Time: '6000.000000'
2025-06-04 12:21:17 (24604): Status Report: CPU Time: '8589.921875'
2025-06-04 14:01:22 (24604): Status Report: Elapsed Time: '12000.000000'
2025-06-04 14:01:22 (24604): Status Report: CPU Time: '22507.796875'
2025-06-04 15:41:33 (24604): Status Report: Elapsed Time: '18000.000000'
2025-06-04 15:41:33 (24604): Status Report: CPU Time: '36655.187500'
2025-06-04 17:10:10 (24604): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 17:10:30 (24604): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 17:22:12 (24604): Status Report: Elapsed Time: '24000.000000'
2025-06-04 17:22:12 (24604): Status Report: CPU Time: '50730.937500'
2025-06-04 19:02:17 (24604): Status Report: Elapsed Time: '30000.000000'
2025-06-04 19:02:17 (24604): Status Report: CPU Time: '64750.265625'
2025-06-04 19:56:26 (24604): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 19:56:46 (24604): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 20:40:51 (24604): Guest Log:  *** Job finished ***
2025-06-04 20:40:51 (24604): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:07,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:08,949 | INFO     | [job] queue monitor thread has finished
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:09,192 | INFO     | [data] queue_monitor thread has finished
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:10,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096265959232)>', '<ExcThread(monitor, started 140095826933504)>']
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:10,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:10,726 | INFO     | [monitor] control thread has ended
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,006 | INFO     | all workflow threads have been joined
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,006 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,006 | INFO     | traces error code: 0
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,451 [wrapper] ==== pilot stdout END ====
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,461 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,470 [wrapper] pilotpid: 6020
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,478 [wrapper] Pilot exit status: 0
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,583 [wrapper] pandaids: 6677471149
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,731 [wrapper] cleanup supervisor_pilot  2175 6021
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,740 [wrapper] Test setup, not cleaning
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,750 [wrapper] apfmon messages muted
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,760 [wrapper] ==== wrapper stdout END ====
2025-06-04 20:40:51 (24604): Guest Log: 2025-06-05 02:40:15,769 [wrapper] ==== wrapper stderr END ====
2025-06-04 20:40:51 (24604): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 20:40:51 (24604): Guest Log:     "exeErrorCode": 0,
2025-06-04 20:40:51 (24604): Guest Log:     "exeErrorDiag": "",
2025-06-04 20:40:51 (24604): Guest Log:     "pilotErrorCode": 0,
2025-06-04 20:40:51 (24604): Guest Log:     "pilotErrorDiag": "",
2025-06-04 20:40:51 (24604): Guest Log:  *** Listing of results directory ***
2025-06-04 20:40:51 (24604): Guest Log: total 187492
2025-06-04 20:40:51 (24604): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 05:14 pilot3.tar.gz
2025-06-04 20:40:51 (24604): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 05:33 runpilot2-wrapper.sh
2025-06-04 20:40:51 (24604): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 05:33 queuedata.json
2025-06-04 20:40:51 (24604): Guest Log: -rwxr-xr-x. 1 atlas atlas      9041 Jun  4 16:42 init_data.xml
2025-06-04 20:40:51 (24604): Guest Log: -rwxr-xr-x. 1 atlas atlas    508873 Jun  4 16:42 input.tar.gz
2025-06-04 20:40:51 (24604): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 16:42 start_atlas.sh
2025-06-04 20:40:51 (24604): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 16:42 EVNT.45006593._000834.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 20:40:51 (24604): Guest Log: -rw-r--r--. 1 atlas atlas      2524 Jun  4 16:42 pandaJob.out
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas    990984 Jun  4 16:44 agis_schedconf.cvmfs.json
2025-06-04 20:40:51 (24604): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 16:44 pilot3
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas 183320611 Jun  5 02:36 HITS.45006595._020846.pool.root.1
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas      1029 Jun  5 02:39 memory_monitor_summary.json
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas        95 Jun  5 02:39 pilot_heartbeat.json
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  5 02:39 agis_ddmendpoints.agis.ALL.json
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas    506258 Jun  5 02:39 log.45006595._020846.job.log.tgz.1
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas      7730 Jun  5 02:40 heartbeat.json
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas      4599 Jun  5 02:40 pilotlog.txt
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas   1945841 Jun  5 02:40 log.45006595._020846.job.log.1
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 02:40 output.list
2025-06-04 20:40:51 (24604): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  5 02:40 runtime_log
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas   2467840 Jun  5 02:40 result.tar.gz
2025-06-04 20:40:51 (24604): Guest Log: -rw-r--r--. 1 atlas atlas      8623 Jun  5 02:40 runtime_log.err
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas       670 Jun  5 02:40 duqNDmNSZg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrDiKDmfr5SGo.diag
2025-06-04 20:40:51 (24604): Guest Log: Looking for outputfile HITS.45006595._020846.pool.root.1
2025-06-04 20:40:51 (24604): Guest Log: HITS file was successfully produced
2025-06-04 20:40:51 (24604): Guest Log: -rw-------. 1 atlas atlas 183320611 Jun  5 02:36 /home/atlas/RunAtlas/HITS.45006595._020846.pool.root.1
2025-06-04 20:40:57 (24604): Guest Log: Successfully finished the ATLAS job!
2025-06-04 20:40:57 (24604): Guest Log: Copying the results back to the shared directory!
2025-06-04 20:40:57 (24604): Guest Log:  *** Contents of shared directory: ***
2025-06-04 20:40:57 (24604): Guest Log: total 395736
2025-06-04 20:40:57 (24604): Guest Log: -rwxrwxrwx. 1 root root 218895235 Jun  4 16:40 ATLAS.root_0
2025-06-04 20:40:57 (24604): Guest Log: -rwxrwxrwx. 1 root root 183320611 Jun  5  2025 HITS.pool.root.1
2025-06-04 20:40:57 (24604): Guest Log: -rwxrwxrwx. 1 root root      9041 Jun  4 16:40 init_data.xml
2025-06-04 20:40:57 (24604): Guest Log: -rwxrwxrwx. 1 root root    508873 Jun  3 08:05 input.tar.gz
2025-06-04 20:40:57 (24604): Guest Log: -rwxrwxrwx. 1 root root   2467840 Jun  5  2025 result.tar.gz
2025-06-04 20:40:57 (24604): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  3 08:05 start_atlas.sh
2025-06-04 20:40:57 (24604): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 20:40:57 (24604): VM Completion File Detected.
2025-06-04 20:40:57 (24604): Powering off VM.
2025-06-04 20:40:58 (24604): Successfully stopped VM.
2025-06-04 20:40:58 (24604): Deregistering VM. (boinc_50e636d3adf53431, slot#0)
2025-06-04 20:40:58 (24604): Removing network bandwidth throttle group from VM.
2025-06-04 20:40:58 (24604): Removing VM from VirtualBox.
20:41:04 (24604): called boinc_finish(0)

</stderr_txt>
]]>

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