Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:00:07 (1221638): wrapper (7.7.26015): starting
04:00:07 (1221638): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:00:07] Arguments: --nthreads 8
[2025-06-03 04:00:07] Threads: 8
[2025-06-03 04:00:07] Checking for CVMFS
[2025-06-03 04:00:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:00:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:00:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:00:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:00:07] 2.12.6.0 7887 35601 364496 146734 0 187 31130232 32935937 9754 16776704 0 353255334 99.696 273969585 22214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 04:00:07] CVMFS is ok
[2025-06-03 04:00:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 04:00:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 04:00:07] Further information can be found at the LHC@home message board.
[2025-06-03 04:00:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:00:07] Checking for apptainer binary...
[2025-06-03 04:00:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:00:07] Running /usr/bin/apptainer --version
[2025-06-03 04:00:07] apptainer version 1.4.1-1.el9
[2025-06-03 04:00:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:00:08] c7-3-28.aglt2.org
[2025-06-03 04:00:08] apptainer works
[2025-06-03 04:00:08] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:00:08] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:00:08] Starting ATLAS job with PandaID=6666806617
[2025-06-03 04:00:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:21:50]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:21:50]  lfn=log.44871837._063476.job.log.tgz.1
[2025-06-03 05:21:50]  mtime=0
[2025-06-03 05:21:50]  protocol_id=None
[2025-06-03 05:21:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 05:21:50]  replicas=None
[2025-06-03 05:21:50]  scope=mc23_13p6TeV
[2025-06-03 05:21:50]  status=None
[2025-06-03 05:21:50]  status_code=0
[2025-06-03 05:21:50]  storage_token=
[2025-06-03 05:21:50]  surl=/tmp/boinchome/slots/11/PanDA_Pilot-6666806617/log.44871837._063476.job.log.tgz.1
[2025-06-03 05:21:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/9a/log.44871837._063476.job.log.tgz.1
[2025-06-03 05:21:50]  workdir=None
[2025-06-03 05:21:50] ]
[2025-06-03 05:21:50] 2025-06-03 09:21:25,998 | INFO     | transferring file log.44871837._063476.job.log.tgz.1 from /tmp/boinchome/slots/11/PanDA_Pilot-6666806617/log.44871837._063476.job.log.tgz.1 to /tmp/boinchome/slots
[2025-06-03 05:21:50] 2025-06-03 09:21:25,998 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/11/PanDA_Pilot-6666806617/log.44871837._063476.job.log.tgz.1 /tmp/boinchome/slots/11/log.44871837._063476.j
[2025-06-03 05:21:50] 2025-06-03 09:21:26,019 | INFO     | adding to output.list: log.44871837._063476.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/9a/log.44871837._063476.job.log.tg
[2025-06-03 05:21:50] 2025-06-03 09:21:26,019 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 05:21:50] 2025-06-03 09:21:26,020 | INFO     | summary of transferred files:
[2025-06-03 05:21:50] 2025-06-03 09:21:26,020 | INFO     |  -- lfn=log.44871837._063476.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 05:21:50] 2025-06-03 09:21:26,020 | INFO     | stage-out finished correctly
[2025-06-03 05:21:50] 2025-06-03 09:21:26,623 | INFO     | monitor loop #357: job 0:6666806617 is in state 'finished'
[2025-06-03 05:21:50] 2025-06-03 09:21:26,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:21:50] 2025-06-03 09:21:29,127 | INFO     | monitor loop #358: job 0:6666806617 is in state 'finished'
[2025-06-03 05:21:50] 2025-06-03 09:21:29,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:21:50] 2025-06-03 09:21:29,140 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 05:21:50] 2025-06-03 09:21:31,629 | INFO     | monitor loop #359: job 0:6666806617 is in state 'finished'
[2025-06-03 05:21:50] 2025-06-03 09:21:31,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:21:50] 2025-06-03 09:21:31,888 | INFO     | job 6666806617 has state=finished
[2025-06-03 05:21:50] 2025-06-03 09:21:31,889 | INFO     | preparing for final server update for job 6666806617 in state='finished'
[2025-06-03 05:21:50] 2025-06-03 09:21:31,889 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:21:50] 2025-06-03 09:21:31,889 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:21:50] 2025-06-03 09:21:31,890 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:21:50] 2025-06-03 09:21:31,890 | INFO     | job 6666806617 has finished - writing final server update
[2025-06-03 05:21:50] 2025-06-03 09:21:31,890 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:21:50] 2025-06-03 09:21:31,909 | INFO     | executing command: lscpu
[2025-06-03 05:21:50] 2025-06-03 09:21:32,001 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:21:50] 2025-06-03 09:21:32,831 | INFO     | PID=1225203 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 05:21:50] 2025-06-03 09:21:32,832 | INFO     | .. there are 11 such processes running
[2025-06-03 05:21:50] 2025-06-03 09:21:34,132 | INFO     | monitor loop #360: job 0:6666806617 is in state 'finished'
[2025-06-03 05:21:50] 2025-06-03 09:21:34,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:21:50] 2025-06-03 09:21:35,342 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 05:21:50] 2025-06-03 09:21:35,343 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6666806617/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:21:50] 2025-06-03 09:21:35,344 | INFO     | extracted standard info from prmon json
[2025-06-03 05:21:50] 2025-06-03 09:21:35,344 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:21:50] 2025-06-03 09:21:35,344 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:21:50] 2025-06-03 09:21:35,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:21:50] 2025-06-03 09:21:35,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:21:50] 2025-06-03 09:21:35,346 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:21:50] 2025-06-03 09:21:35,346 | INFO     | sum of square deviations: 120605052.0
[2025-06-03 05:21:50] 2025-06-03 09:21:35,347 | INFO     | sum of deviations: 10388532654.000002
[2025-06-03 05:21:50] 2025-06-03 09:21:35,347 | INFO     | mean x: 1748940147.0
[2025-06-03 05:21:50] 2025-06-03 09:21:35,347 | INFO     | mean y: 2118835.4246575343
[2025-06-03 05:21:50] 2025-06-03 09:21:35,347 | INFO     | -- intersect: -150645980275.72256
[2025-06-03 05:21:50] 2025-06-03 09:21:35,347 | INFO     | intersect: -150645980275.72256
[2025-06-03 05:21:50] 2025-06-03 09:21:35,347 | INFO     | chi2: 0.9296177968719119
[2025-06-03 05:21:50] 2025-06-03 09:21:35,347 | INFO     | -- intersect: -150645980275.72256
[2025-06-03 05:21:50] 2025-06-03 09:21:35,347 | INFO     | current memory leak: 86.14 B/s (using 73 data points, chi2=0.93)
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | ..............................
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | . Timing measurements:
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | . get job = 0 s
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | . initial setup = 2 s
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | . payload setup = 6 s
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | . stage-in = 0 s
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | . payload execution = 4840 s
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | . stage-out = 0 s
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | . log creation = 0 s
[2025-06-03 05:21:50] 2025-06-03 09:21:35,348 | INFO     | ..............................
[2025-06-03 05:21:50] 2025-06-03 09:21:35,418 | INFO     | 
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | job summary report
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | --------------------------------------------------
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | PanDA job id: 6666806617
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | task id: 44871837
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | errors: (none)
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | pilot state: finished 
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | transexitcode: 0
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | exeerrorcode: 0
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | exeerrordiag: 
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | exitcode: 0
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | exitmsg: OK
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | cpuconsumptiontime: 33377 s
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | nevents: 400
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | neventsw: 0
[2025-06-03 05:21:50] 2025-06-03 09:21:35,419 | INFO     | pid: 1231636
[2025-06-03 05:21:50] 2025-06-03 09:21:35,420 | INFO     | pgrp: 1231636
[2025-06-03 05:21:50] 2025-06-03 09:21:35,420 | INFO     | corecount: 8
[2025-06-03 05:21:50] 2025-06-03 09:21:35,420 | INFO     | event service: False
[2025-06-03 05:21:50] 2025-06-03 09:21:35,420 | INFO     | sizes: {0: 2404355, 1: 2405212, 5: 2405418, 12: 2405474, 4850: 2431606, 4851: 2431605, 4852: 2440732, 4855: 2440788, 4861: 2440958}
[2025-06-03 05:21:50] 2025-06-03 09:21:35,420 | INFO     | --------------------------------------------------
[2025-06-03 05:21:50] 2025-06-03 09:21:35,420 | INFO     | 
[2025-06-03 05:21:50] 2025-06-03 09:21:35,420 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-06-03 05:21:50] 2025-06-03 09:21:35,445 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,446 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,446 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,446 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | job 6666806617 has completed (purged errors)
[2025-06-03 05:21:50] 2025-06-03 09:21:35,447 | INFO     | overall cleanup function is called
[2025-06-03 05:21:50] 2025-06-03 09:21:36,456 | INFO     | --- collectZombieJob: --- 10, [1231636]
[2025-06-03 05:21:50] 2025-06-03 09:21:36,456 | INFO     | zombie collector waiting for pid 1231636
[2025-06-03 05:21:50] 2025-06-03 09:21:36,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:21:50] 2025-06-03 09:21:36,456 | INFO     | collected zombie processes
[2025-06-03 05:21:50] 2025-06-03 09:21:36,457 | INFO     | will attempt to kill all subprocesses of pid=1231636
[2025-06-03 05:21:50] 2025-06-03 09:21:36,831 | INFO     | process IDs to be killed: [1231636] (in reverse order)
[2025-06-03 05:21:50] 2025-06-03 09:21:36,959 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:21:50] 2025-06-03 09:21:36,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:21:50] 2025-06-03 09:21:36,978 | INFO     | did not find any defunct processes belonging to 1231636
[2025-06-03 05:21:50] 2025-06-03 09:21:36,991 | INFO     | did not find any defunct processes belonging to 1231636
[2025-06-03 05:21:50] 2025-06-03 09:21:36,992 | INFO     | ready for new job
[2025-06-03 05:21:50] 2025-06-03 09:21:36,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:21:50] 2025-06-03 09:21:36,993 | INFO     | **************************************
[2025-06-03 05:21:50] 2025-06-03 09:21:36,993 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:21:50] 2025-06-03 09:21:36,993 | INFO     | **************************************
[2025-06-03 05:21:50] 2025-06-03 09:21:36,993 | INFO     | 
[2025-06-03 05:21:50] 2025-06-03 09:21:37,010 | INFO     | architecture information:
[2025-06-03 05:21:50] 2025-06-03 09:21:37,010 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:21:50] 2025-06-03 09:21:37,029 | INFO     | cat /etc/os-release:
[2025-06-03 05:21:50] NAME="CentOS Linux"
[2025-06-03 05:21:50] VERSION="7 (Core)"
[2025-06-03 05:21:50] ID="centos"
[2025-06-03 05:21:50] ID_LIKE="rhel fedora"
[2025-06-03 05:21:50] VERSION_ID="7"
[2025-06-03 05:21:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:21:50] ANSI_COLOR="0;31"
[2025-06-03 05:21:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:21:50] HOME_URL="https://www.centos.org/"
[2025-06-03 05:21:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:21:50] 
[2025-06-03 05:21:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:21:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:21:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:21:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:21:50] 
[2025-06-03 05:21:50] 2025-06-03 09:21:37,029 | INFO     | **************************************
[2025-06-03 05:21:50] 2025-06-03 09:21:37,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-06-03 05:21:50] 2025-06-03 09:21:37,548 | INFO     | sufficient remaining disk space (70502055936 B)
[2025-06-03 05:21:50] 2025-06-03 09:21:37,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:21:50] 2025-06-03 09:21:37,548 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:21:50] 2025-06-03 09:21:37,548 | INFO     | update_server=False
[2025-06-03 05:21:50] 2025-06-03 09:21:37,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:21:50] 2025-06-03 09:21:37,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:21:50] 2025-06-03 09:21:37,549 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 05:21:50] 2025-06-03 09:21:37,550 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:21:50] 2025-06-03 09:21:37,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:21:50] 2025-06-03 09:21:37,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:21:50] 2025-06-03 09:21:37,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:21:50] 2025-06-03 09:21:37,640 | INFO     | aborting loop
[2025-06-03 05:21:50] 2025-06-03 09:21:37,844 | INFO     | all data control threads have been joined
[2025-06-03 05:21:50] 2025-06-03 09:21:38,003 | INFO     | all job control threads have been joined
[2025-06-03 05:21:50] 2025-06-03 09:21:38,554 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:38,607 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:38,645 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:38,737 | INFO     | all payload control threads have been joined
[2025-06-03 05:21:50] 2025-06-03 09:21:38,849 | INFO     | [data] control thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,000 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,009 | INFO     | [job] control thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,169 | INFO     | [job] validate thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,311 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,367 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,504 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,555 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:21:50] 2025-06-03 09:21:39,742 | INFO     | [payload] control thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:39,812 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:40,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:21:50] 2025-06-03 09:21:41,434 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:43,735 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:21:50] 2025-06-03 09:21:45,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140484362532672)>', '<ExcThread(monitor, started 140483875563264)>']
[2025-06-03 05:21:50] 2025-06-03 09:21:45,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:21:50] 2025-06-03 09:21:45,591 | INFO     | [monitor] control thread has ended
[2025-06-03 05:21:50] 2025-06-03 09:21:50,094 | INFO     | all workflow threads have been joined
[2025-06-03 05:21:50] 2025-06-03 09:21:50,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:21:50] 2025-06-03 09:21:50,094 | INFO     | traces error code: 0
[2025-06-03 05:21:50] 2025-06-03 09:21:50,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:21:50] 2025-06-03 09:21:50,238 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:21:50] 2025-06-03 09:21:50,241 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:21:50] 2025-06-03 09:21:50,243 [wrapper] pilotpid: 1225203
[2025-06-03 05:21:50] 2025-06-03 09:21:50,245 [wrapper] Pilot exit status: 0
[2025-06-03 05:21:50] 2025-06-03 09:21:50,253 [wrapper] pandaids: 6666806617
[2025-06-03 05:21:50] 2025-06-03 09:21:50,342 [wrapper] cleanup supervisor_pilot 1617506 1225204
[2025-06-03 05:21:50] 2025-06-03 09:21:50,345 [wrapper] Test setup, not cleaning
[2025-06-03 05:21:50] 2025-06-03 09:21:50,347 [wrapper] apfmon messages muted
[2025-06-03 05:21:50] 2025-06-03 09:21:50,350 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:21:50] 2025-06-03 09:21:50,353 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:21:50]  *** Error codes and diagnostics ***
[2025-06-03 05:21:50]     "exeErrorCode": 0,
[2025-06-03 05:21:50]     "exeErrorDiag": "",
[2025-06-03 05:21:50]     "pilotErrorCode": 0,
[2025-06-03 05:21:50]     "pilotErrorDiag": "",
[2025-06-03 05:21:50]  *** Listing of results directory ***
[2025-06-03 05:21:50] total 409108
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas    495897 May 27 02:07 pilot3.tar.gz
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas      5111 May 27 02:24 queuedata.json
[2025-06-03 05:21:50] -rwx------. 1 boincer umatlas     37140 May 27 02:24 runpilot2-wrapper.sh
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas       100 Jun  3 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:21:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 04:00 run_atlas
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas       105 Jun  3 04:00 job.xml
[2025-06-03 05:21:50] -rw-r--r--. 2 boincer umatlas 224338010 Jun  3 04:00 EVNT.44871834._002503.pool.root.1
[2025-06-03 05:21:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 04:00 start_atlas.sh
[2025-06-03 05:21:50] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 04:00 shared
[2025-06-03 05:21:50] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 04:00 input.tar.gz
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas         0 Jun  3 04:00 boinc_lockfile
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas      2558 Jun  3 04:00 pandaJob.out
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas    985499 Jun  3 04:00 agis_schedconf.cvmfs.json
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas   1603667 Jun  3 04:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:21:50] drwx------. 4 boincer umatlas      4096 Jun  3 04:00 pilot3
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas      6935 Jun  3 05:21 init_data.xml
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas 189180688 Jun  3 05:21 HITS.44871837._063476.pool.root.1
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas       529 Jun  3 05:21 boinc_task_state.xml
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas        95 Jun  3 05:21 pilot_heartbeat.json
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas      1026 Jun  3 05:21 memory_monitor_summary.json
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas    311160 Jun  3 05:21 log.44871837._063476.job.log.tgz.1
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas      7682 Jun  3 05:21 heartbeat.json
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas      4477 Jun  3 05:21 pilotlog.txt
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 05:21 boinc_mmap_file
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas        27 Jun  3 05:21 wrapper_checkpoint.txt
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas    474053 Jun  3 05:21 log.44871837._063476.job.log.1
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas       357 Jun  3 05:21 output.list
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas       620 Jun  3 05:21 runtime_log
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas    808960 Jun  3 05:21 result.tar.gz
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas      8668 Jun  3 05:21 runtime_log.err
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas       650 Jun  3 05:21 axHLDmCv2d7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0RRKDmYzXu4m.diag
[2025-06-03 05:21:50] -rw-r--r--. 1 boincer umatlas     21730 Jun  3 05:21 stderr.txt
[2025-06-03 05:21:50] HITS file was successfully produced:
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas 189180688 Jun  3 05:21 shared/HITS.pool.root.1
[2025-06-03 05:21:50]  *** Contents of shared directory: ***
[2025-06-03 05:21:50] total 405144
[2025-06-03 05:21:50] -rw-r--r--. 2 boincer umatlas 224338010 Jun  3 04:00 ATLAS.root_0
[2025-06-03 05:21:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 04:00 start_atlas.sh
[2025-06-03 05:21:50] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 04:00 input.tar.gz
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas 189180688 Jun  3 05:21 HITS.pool.root.1
[2025-06-03 05:21:50] -rw-------. 1 boincer umatlas    808960 Jun  3 05:21 result.tar.gz
05:21:52 (1221638): run_atlas exited; CPU time 33544.307812
05:21:52 (1221638): called boinc_finish(0)

</stderr_txt>
]]>

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