Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:04:02 (207154): wrapper (7.7.26015): starting
04:04:02 (207154): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:04:02] Arguments: --nthreads 8
[2025-06-03 04:04:02] Threads: 8
[2025-06-03 04:04:02] Checking for CVMFS
[2025-06-03 04:04:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:04:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:04:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:04:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:04:03] 2.12.6.0 5013 35607 594180 146734 2 358 22721881 32935937 16163 16776704 1 495663455 99.668 412682901 36172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 04:04:03] CVMFS is ok
[2025-06-03 04:04:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 04:04:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 04:04:03] Further information can be found at the LHC@home message board.
[2025-06-03 04:04:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:04:03] Checking for apptainer binary...
[2025-06-03 04:04:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:04:03] Running /usr/bin/apptainer --version
[2025-06-03 04:04:03] apptainer version 1.4.1-1.el9
[2025-06-03 04:04:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:04:03] c7-9-15.aglt2.org
[2025-06-03 04:04:03] apptainer works
[2025-06-03 04:04:03] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:04:03] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:04:03] Starting ATLAS job with PandaID=6666448000
[2025-06-03 04:04:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:11:29]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:11:29]  is_tar=False
[2025-06-03 05:11:29]  lfn=log.44871837._057641.job.log.tgz.1
[2025-06-03 05:11:29]  mtime=0
[2025-06-03 05:11:29]  protocol_id=None
[2025-06-03 05:11:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 05:11:29]  replicas=None
[2025-06-03 05:11:29]  scope=mc23_13p6TeV
[2025-06-03 05:11:29]  status=None
[2025-06-03 05:11:29]  status_code=0
[2025-06-03 05:11:29]  storage_token=
[2025-06-03 05:11:29]  surl=/tmp/boinchome/slots/11/PanDA_Pilot-6666448000/log.44871837._057641.job.log.tgz.1
[2025-06-03 05:11:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/3a/log.44871837._057641.job.log.tgz.1
[2025-06-03 05:11:29]  workdir=None
[2025-06-03 05:11:29] ]
[2025-06-03 05:11:29] 2025-06-03 09:11:04,398 | INFO     | transferring file log.44871837._057641.job.log.tgz.1 from /tmp/boinchome/slots/11/PanDA_Pilot-6666448000/log.44871837._057641.job.log.tgz.1 to /tmp/boinchome/slots
[2025-06-03 05:11:29] 2025-06-03 09:11:04,398 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/11/PanDA_Pilot-6666448000/log.44871837._057641.job.log.tgz.1 /tmp/boinchome/slots/11/log.44871837._057641.j
[2025-06-03 05:11:29] 2025-06-03 09:11:04,414 | INFO     | adding to output.list: log.44871837._057641.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/3a/log.44871837._057641.job.log.tg
[2025-06-03 05:11:29] 2025-06-03 09:11:04,414 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 05:11:29] 2025-06-03 09:11:04,414 | INFO     | summary of transferred files:
[2025-06-03 05:11:29] 2025-06-03 09:11:04,414 | INFO     |  -- lfn=log.44871837._057641.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 05:11:29] 2025-06-03 09:11:04,415 | INFO     | stage-out finished correctly
[2025-06-03 05:11:29] 2025-06-03 09:11:05,631 | INFO     | monitor loop #293: job 0:6666448000 is in state 'finished'
[2025-06-03 05:11:29] 2025-06-03 09:11:05,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:11:29] 2025-06-03 09:11:07,763 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 05:11:29] 2025-06-03 09:11:08,132 | INFO     | monitor loop #294: job 0:6666448000 is in state 'finished'
[2025-06-03 05:11:29] 2025-06-03 09:11:08,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:11:29] 2025-06-03 09:11:09,184 | INFO     | job 6666448000 has state=finished
[2025-06-03 05:11:29] 2025-06-03 09:11:09,184 | INFO     | preparing for final server update for job 6666448000 in state='finished'
[2025-06-03 05:11:29] 2025-06-03 09:11:09,185 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:11:29] 2025-06-03 09:11:09,185 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:11:29] 2025-06-03 09:11:09,185 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:11:29] 2025-06-03 09:11:09,185 | INFO     | job 6666448000 has finished - writing final server update
[2025-06-03 05:11:29] 2025-06-03 09:11:09,185 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:11:29] 2025-06-03 09:11:09,203 | INFO     | executing command: lscpu
[2025-06-03 05:11:29] 2025-06-03 09:11:09,290 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:11:29] 2025-06-03 09:11:10,636 | INFO     | monitor loop #295: job 0:6666448000 is in state 'finished'
[2025-06-03 05:11:29] 2025-06-03 09:11:10,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:11:29] 2025-06-03 09:11:11,935 | INFO     | PID=211634 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 05:11:29] 2025-06-03 09:11:11,935 | INFO     | .. there are 18 such processes running
[2025-06-03 05:11:29] 2025-06-03 09:11:12,702 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 05:11:29] 2025-06-03 09:11:12,702 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6666448000/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:11:29] 2025-06-03 09:11:12,702 | INFO     | extracted standard info from prmon json
[2025-06-03 05:11:29] 2025-06-03 09:11:12,703 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:11:29] 2025-06-03 09:11:12,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:11:29] 2025-06-03 09:11:12,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:11:29] 2025-06-03 09:11:12,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:11:29] 2025-06-03 09:11:12,704 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:11:29] 2025-06-03 09:11:12,704 | INFO     | sum of square deviations: 63666310.0
[2025-06-03 05:11:29] 2025-06-03 09:11:12,704 | INFO     | sum of deviations: 8594040266.0
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | mean x: 1748939948.0
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | mean y: 2098658.627118644
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | -- intersect: -236079752730.71756
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | intersect: -236079752730.71756
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | chi2: 0.8273288476221509
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | -- intersect: -236079752730.71756
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | current memory leak: 134.99 B/s (using 59 data points, chi2=0.83)
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | ..............................
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | . Timing measurements:
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | . get job = 0 s
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | . initial setup = 2 s
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | . payload setup = 5 s
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | . stage-in = 0 s
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | . payload execution = 3988 s
[2025-06-03 05:11:29] 2025-06-03 09:11:12,705 | INFO     | . stage-out = 0 s
[2025-06-03 05:11:29] 2025-06-03 09:11:12,706 | INFO     | . log creation = 0 s
[2025-06-03 05:11:29] 2025-06-03 09:11:12,706 | INFO     | ..............................
[2025-06-03 05:11:29] 2025-06-03 09:11:13,095 | INFO     | 
[2025-06-03 05:11:29] 2025-06-03 09:11:13,095 | INFO     | job summary report
[2025-06-03 05:11:29] 2025-06-03 09:11:13,095 | INFO     | --------------------------------------------------
[2025-06-03 05:11:29] 2025-06-03 09:11:13,095 | INFO     | PanDA job id: 6666448000
[2025-06-03 05:11:29] 2025-06-03 09:11:13,095 | INFO     | task id: 44871837
[2025-06-03 05:11:29] 2025-06-03 09:11:13,095 | INFO     | errors: (none)
[2025-06-03 05:11:29] 2025-06-03 09:11:13,095 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:11:29] 2025-06-03 09:11:13,095 | INFO     | pilot state: finished 
[2025-06-03 05:11:29] 2025-06-03 09:11:13,095 | INFO     | transexitcode: 0
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | exeerrorcode: 0
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | exeerrordiag: 
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | exitcode: 0
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | exitmsg: OK
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | cpuconsumptiontime: 26547 s
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | nevents: 400
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | neventsw: 0
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | pid: 224249
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | pgrp: 224249
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | corecount: 8
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | event service: False
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | sizes: {0: 2405183, 1: 2405183, 4: 2405417, 11: 2405445, 3997: 2431305, 3999: 2440248, 4003: 2440432, 4008: 2440602}
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | --------------------------------------------------
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | 
[2025-06-03 05:11:29] 2025-06-03 09:11:13,096 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-06-03 05:11:29] 2025-06-03 09:11:13,112 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,113 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:11:29] 2025-06-03 09:11:13,114 | INFO     | job 6666448000 has completed (purged errors)
[2025-06-03 05:11:29] 2025-06-03 09:11:13,114 | INFO     | overall cleanup function is called
[2025-06-03 05:11:29] 2025-06-03 09:11:14,117 | INFO     | --- collectZombieJob: --- 10, [224249]
[2025-06-03 05:11:29] 2025-06-03 09:11:14,117 | INFO     | zombie collector waiting for pid 224249
[2025-06-03 05:11:29] 2025-06-03 09:11:14,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:11:29] 2025-06-03 09:11:14,118 | INFO     | collected zombie processes
[2025-06-03 05:11:29] 2025-06-03 09:11:14,118 | INFO     | will attempt to kill all subprocesses of pid=224249
[2025-06-03 05:11:29] 2025-06-03 09:11:14,478 | INFO     | process IDs to be killed: [224249] (in reverse order)
[2025-06-03 05:11:29] 2025-06-03 09:11:14,595 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:11:29] 2025-06-03 09:11:14,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:11:29] 2025-06-03 09:11:14,611 | INFO     | did not find any defunct processes belonging to 224249
[2025-06-03 05:11:29] 2025-06-03 09:11:14,626 | INFO     | did not find any defunct processes belonging to 224249
[2025-06-03 05:11:29] 2025-06-03 09:11:14,627 | INFO     | ready for new job
[2025-06-03 05:11:29] 2025-06-03 09:11:14,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:11:29] 2025-06-03 09:11:14,628 | INFO     | **************************************
[2025-06-03 05:11:29] 2025-06-03 09:11:14,628 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:11:29] 2025-06-03 09:11:14,628 | INFO     | **************************************
[2025-06-03 05:11:29] 2025-06-03 09:11:14,628 | INFO     | 
[2025-06-03 05:11:29] 2025-06-03 09:11:14,645 | INFO     | architecture information:
[2025-06-03 05:11:29] 2025-06-03 09:11:14,646 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:11:29] 2025-06-03 09:11:14,659 | INFO     | cat /etc/os-release:
[2025-06-03 05:11:29] NAME="CentOS Linux"
[2025-06-03 05:11:29] VERSION="7 (Core)"
[2025-06-03 05:11:29] ID="centos"
[2025-06-03 05:11:29] ID_LIKE="rhel fedora"
[2025-06-03 05:11:29] VERSION_ID="7"
[2025-06-03 05:11:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:11:29] ANSI_COLOR="0;31"
[2025-06-03 05:11:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:11:29] HOME_URL="https://www.centos.org/"
[2025-06-03 05:11:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:11:29] 
[2025-06-03 05:11:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:11:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:11:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:11:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:11:29] 
[2025-06-03 05:11:29] 2025-06-03 09:11:14,660 | INFO     | **************************************
[2025-06-03 05:11:29] 2025-06-03 09:11:15,160 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-06-03 05:11:29] 2025-06-03 09:11:15,175 | INFO     | sufficient remaining disk space (68506615808 B)
[2025-06-03 05:11:29] 2025-06-03 09:11:15,175 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:11:29] 2025-06-03 09:11:15,175 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:11:29] 2025-06-03 09:11:15,175 | INFO     | update_server=False
[2025-06-03 05:11:29] 2025-06-03 09:11:15,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:11:29] 2025-06-03 09:11:15,176 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:11:29] 2025-06-03 09:11:15,190 | INFO     | all job control threads have been joined
[2025-06-03 05:11:29] 2025-06-03 09:11:15,500 | INFO     | all payload control threads have been joined
[2025-06-03 05:11:29] 2025-06-03 09:11:15,651 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 05:11:29] 2025-06-03 09:11:15,652 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 05:11:29] 2025-06-03 09:11:15,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:11:29] 2025-06-03 09:11:15,652 | INFO     | will abort loop
[2025-06-03 05:11:29] 2025-06-03 09:11:15,946 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:11:29] 2025-06-03 09:11:15,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:11:29] 2025-06-03 09:11:15,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:11:29] 2025-06-03 09:11:16,116 | INFO     | all data control threads have been joined
[2025-06-03 05:11:29] 2025-06-03 09:11:16,181 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:16,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:16,195 | INFO     | [job] control thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:16,236 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:16,506 | INFO     | [payload] control thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:16,589 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:16,653 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:17,091 | INFO     | [job] validate thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:17,121 | INFO     | [data] control thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:17,181 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:17,204 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:17,236 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:17,250 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:17,443 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:17,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:11:29] 2025-06-03 09:11:18,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:11:29] 2025-06-03 09:11:18,778 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:22,341 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:11:29] 2025-06-03 09:11:23,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372529678144)>', '<ExcThread(monitor, started 140371803760384)>']
[2025-06-03 05:11:29] 2025-06-03 09:11:23,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:11:29] 2025-06-03 09:11:23,986 | INFO     | [monitor] control thread has ended
[2025-06-03 05:11:29] 2025-06-03 09:11:28,879 | INFO     | all workflow threads have been joined
[2025-06-03 05:11:29] 2025-06-03 09:11:28,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:11:29] 2025-06-03 09:11:28,880 | INFO     | traces error code: 0
[2025-06-03 05:11:29] 2025-06-03 09:11:28,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:11:29] 2025-06-03 09:11:28,959 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:11:29] 2025-06-03 09:11:28,962 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:11:29] 2025-06-03 09:11:28,965 [wrapper] pilotpid: 211634
[2025-06-03 05:11:29] 2025-06-03 09:11:28,967 [wrapper] Pilot exit status: 0
[2025-06-03 05:11:29] 2025-06-03 09:11:28,978 [wrapper] pandaids: 6666448000
[2025-06-03 05:11:29] 2025-06-03 09:11:29,064 [wrapper] cleanup supervisor_pilot 1131723 211635
[2025-06-03 05:11:29] 2025-06-03 09:11:29,067 [wrapper] Test setup, not cleaning
[2025-06-03 05:11:29] 2025-06-03 09:11:29,070 [wrapper] apfmon messages muted
[2025-06-03 05:11:29] 2025-06-03 09:11:29,073 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:11:29] 2025-06-03 09:11:29,075 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:11:29]  *** Error codes and diagnostics ***
[2025-06-03 05:11:29]     "exeErrorCode": 0,
[2025-06-03 05:11:29]     "exeErrorDiag": "",
[2025-06-03 05:11:29]     "pilotErrorCode": 0,
[2025-06-03 05:11:29]     "pilotErrorDiag": "",
[2025-06-03 05:11:29]  *** Listing of results directory ***
[2025-06-03 05:11:29] total 426600
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas    495897 May 26 17:09 pilot3.tar.gz
[2025-06-03 05:11:29] -rwx------. 1 boincer umatlas     37140 May 26 17:59 runpilot2-wrapper.sh
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas      5111 May 26 17:59 queuedata.json
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas       100 Jun  3 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:11:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 04:04 run_atlas
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas       105 Jun  3 04:04 job.xml
[2025-06-03 05:11:29] -rw-r--r--. 2 boincer umatlas 226386476 Jun  3 04:04 EVNT.44871834._000618.pool.root.1
[2025-06-03 05:11:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 04:04 start_atlas.sh
[2025-06-03 05:11:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 04:04 shared
[2025-06-03 05:11:29] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 04:04 input.tar.gz
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas         0 Jun  3 04:04 boinc_lockfile
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas      2558 Jun  3 04:04 pandaJob.out
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas    985499 Jun  3 04:04 agis_schedconf.cvmfs.json
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas   1603667 Jun  3 04:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:11:29] drwx------. 4 boincer umatlas      4096 Jun  3 04:04 pilot3
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas        95 Jun  3 05:10 pilot_heartbeat.json
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas 205213859 Jun  3 05:10 HITS.44871837._057641.pool.root.1
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas       529 Jun  3 05:10 boinc_task_state.xml
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas      1033 Jun  3 05:10 memory_monitor_summary.json
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas    297860 Jun  3 05:11 log.44871837._057641.job.log.tgz.1
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas      7162 Jun  3 05:11 init_data.xml
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas      7689 Jun  3 05:11 heartbeat.json
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas        27 Jun  3 05:11 wrapper_checkpoint.txt
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 05:11 boinc_mmap_file
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas      4540 Jun  3 05:11 pilotlog.txt
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas    404948 Jun  3 05:11 log.44871837._057641.job.log.1
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas       357 Jun  3 05:11 output.list
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas       620 Jun  3 05:11 runtime_log
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas    716800 Jun  3 05:11 result.tar.gz
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas       650 Jun  3 05:11 sNRNDmi1ud7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmenXKDmw1gPdn.diag
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas      8668 Jun  3 05:11 runtime_log.err
[2025-06-03 05:11:29] -rw-r--r--. 1 boincer umatlas     21561 Jun  3 05:11 stderr.txt
[2025-06-03 05:11:29] HITS file was successfully produced:
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas 205213859 Jun  3 05:10 shared/HITS.pool.root.1
[2025-06-03 05:11:29]  *** Contents of shared directory: ***
[2025-06-03 05:11:29] total 422716
[2025-06-03 05:11:29] -rw-r--r--. 2 boincer umatlas 226386476 Jun  3 04:04 ATLAS.root_0
[2025-06-03 05:11:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 04:04 start_atlas.sh
[2025-06-03 05:11:29] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 04:04 input.tar.gz
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas 205213859 Jun  3 05:10 HITS.pool.root.1
[2025-06-03 05:11:29] -rw-------. 1 boincer umatlas    716800 Jun  3 05:11 result.tar.gz
05:11:30 (207154): run_atlas exited; CPU time 26643.305210
05:11:30 (207154): called boinc_finish(0)

</stderr_txt>
]]>

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