Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 13:43:48 (5888): Detected: vboxwrapper 26206
2025-06-03 13:43:48 (5888): Detected: BOINC client v8.0.2
2025-06-03 13:43:48 (5888): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-06-03 13:43:49 (5888): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 13:43:49 (5888): Create VM. (boinc_995c6654519f39c3, slot#1)
2025-06-03 13:43:50 (5888): Setting Memory Size for VM. (4800MB)
2025-06-03 13:43:50 (5888): Setting CPU Count for VM. (8)
2025-06-03 13:43:50 (5888): Setting Chipset Options for VM.
2025-06-03 13:43:51 (5888): Setting Graphics Controller Options for VM.
2025-06-03 13:43:51 (5888): Setting Boot Options for VM.
2025-06-03 13:43:51 (5888): Setting Network Configuration for NAT.
2025-06-03 13:43:51 (5888): Enabling VM Network Access.
2025-06-03 13:43:52 (5888): Disabling USB Support for VM.
2025-06-03 13:43:52 (5888): Disabling COM Port Support for VM.
2025-06-03 13:43:52 (5888): Disabling LPT Port Support for VM.
2025-06-03 13:43:52 (5888): Disabling Audio Support for VM.
2025-06-03 13:43:53 (5888): Disabling Clipboard Support for VM.
2025-06-03 13:43:53 (5888): Disabling Drag and Drop Support for VM.
2025-06-03 13:43:53 (5888): Adding storage controller(s) to VM.
2025-06-03 13:43:53 (5888): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 13:43:56 (5888): Adding VirtualBox Guest Additions to VM.
2025-06-03 13:43:57 (5888): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 13:43:57 (5888): forwarding host port 51497 to guest port 80
2025-06-03 13:43:57 (5888): Enabling remote desktop for VM.
2025-06-03 13:43:57 (5888): Required extension pack not installed, remote desktop not enabled.
2025-06-03 13:43:57 (5888): Enabling shared directory for VM.
2025-06-03 13:43:58 (5888): Starting VM using VBoxManage interface. (boinc_995c6654519f39c3, slot#1)
2025-06-03 13:44:04 (5888): Successfully started VM. (PID = '6800')
2025-06-03 13:44:04 (5888): Reporting VM Process ID to BOINC.
2025-06-03 13:44:04 (5888): Guest Log: BIOS: VirtualBox 7.0.6
2025-06-03 13:44:04 (5888): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 13:44:04 (5888): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 13:44:04 (5888): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 13:44:04 (5888): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 13:44:04 (5888): Detected: Web Application Enabled (http://localhost:51497)
2025-06-03 13:44:04 (5888): Preference change detected
2025-06-03 13:44:04 (5888): Setting CPU throttle for VM. (70%)
2025-06-03 13:44:04 (5888): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 13:44:06 (5888): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 13:44:06 (5888): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 13:44:09 (5888): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 13:44:09 (5888): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 13:44:09 (5888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 13:44:16 (5888): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 13:44:16 (5888): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 13:44:22 (5888): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 13:44:22 (5888): Guest Log: 00:00:00.000105 main     Log opened 2025-06-03T13:44:21.241433000Z
2025-06-03 13:44:22 (5888): Guest Log: 00:00:00.000185 main     OS Product: Linux
2025-06-03 13:44:22 (5888): Guest Log: 00:00:00.000210 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 13:44:22 (5888): Guest Log: 00:00:00.000228 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 13:44:22 (5888): Guest Log: 00:00:00.000250 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 13:44:22 (5888): Guest Log: 00:00:00.000251 main     Process ID: 1369
2025-06-03 13:44:22 (5888): Guest Log: 00:00:00.000251 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 13:44:22 (5888): Guest Log: 00:00:00.000891 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 13:44:22 (5888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 13:44:22 (5888): Guest Log: [INFO] Mounting shared directory
2025-06-03 13:44:23 (5888): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 13:44:26 (5888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 13:44:26 (5888): Guest Log: [INFO] Detected branch: prod
2025-06-03 13:44:26 (5888): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 13:44:26 (5888): Guest Log: Copying input files
2025-06-03 13:44:28 (5888): Guest Log: Copied input files into RunAtlas.
2025-06-03 13:44:28 (5888): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-03 13:44:28 (5888): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-03 13:44:28 (5888): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-03 13:44:28 (5888): Guest Log: Further information can be found at the LHC@home message board.
2025-06-03 13:44:32 (5888): Guest Log: 00:00:10.006749 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 253 905 000ns (GuestNow=1 748 951 071 989 558 000 ns GuestLast=1 748 958 261 243 463 000 ns fSetTimeLastLoop=true )
2025-06-03 13:44:37 (5888): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 13:44:37 (5888): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 13:44:37 (5888): Guest Log: 2.6.3.0 1644 0 30136 146741 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-03 13:44:38 (5888): Guest Log: copied the webapp to /var/www
2025-06-03 13:44:38 (5888): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-03 13:44:38 (5888): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-03 13:44:38 (5888): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 13:44:38 (5888): Guest Log:  *** Starting ATLAS job. (PandaID=6666594618 taskID=44871837) ***
2025-06-03 15:12:28 (5888): Guest Log:  *** Job finished ***
2025-06-03 15:12:28 (5888): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:13,527 | INFO     | [data] queue_monitor thread has finished
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:19,490 | INFO     | job.realtimelogging is not enabled
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:20,563 | INFO     | [payload] run_realtimelog thread has finished
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:20,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388580439872)>', '<ExcThread(monitor, started 140387901495040)>']
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:21,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:21,015 | INFO     | [monitor] control thread has ended
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:25,755 | INFO     | all workflow threads have been joined
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:25,755 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:25,755 | INFO     | traces error code: 0
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:25,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:25,814 [wrapper] ==== pilot stdout END ====
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:25,819 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:25,822 [wrapper] pilotpid: 5989
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:25,826 [wrapper] Pilot exit status: 0
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:26,397 [wrapper] pandaids: 6666594618
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:26,438 [wrapper] cleanup supervisor_pilot   592 5990
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:26,447 [wrapper] Test setup, not cleaning
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:26,457 [wrapper] apfmon messages muted
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:26,465 [wrapper] ==== wrapper stdout END ====
2025-06-03 15:12:28 (5888): Guest Log: 2025-06-03 13:12:26,473 [wrapper] ==== wrapper stderr END ====
2025-06-03 15:12:28 (5888): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 15:12:28 (5888): Guest Log:     "exeErrorCode": 0,
2025-06-03 15:12:28 (5888): Guest Log:     "exeErrorDiag": "",
2025-06-03 15:12:28 (5888): Guest Log:     "pilotErrorCode": 0,
2025-06-03 15:12:28 (5888): Guest Log:     "pilotErrorDiag": "",
2025-06-03 15:12:28 (5888): Guest Log:  *** Listing of results directory ***
2025-06-03 15:12:28 (5888): Guest Log: total 192468
2025-06-03 15:12:28 (5888): Guest Log: -rw-r--r--. 1 atlas atlas    503527 Apr  3 07:42 pilot3.tar.gz
2025-06-03 15:12:28 (5888): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 01:23 queuedata.json
2025-06-03 15:12:28 (5888): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 01:27 runpilot2-wrapper.sh
2025-06-03 15:12:28 (5888): Guest Log: -rwxr-xr-x. 1 atlas atlas     12334 Jun  3 11:44 init_data.xml
2025-06-03 15:12:28 (5888): Guest Log: -rwxr-xr-x. 1 atlas atlas    517092 Jun  3 11:44 input.tar.gz
2025-06-03 15:12:28 (5888): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  3 11:44 start_atlas.sh
2025-06-03 15:12:28 (5888): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 11:44 EVNT.44871834._002372.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 15:12:28 (5888): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jun  3 11:44 pandaJob.out
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas    982666 Jun  3 11:45 agis_schedconf.cvmfs.json
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 11:45 agis_ddmendpoints.agis.ALL.json
2025-06-03 15:12:28 (5888): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 11:45 pilot3
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas 191839421 Jun  3 13:11 HITS.44871837._060048.pool.root.1
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas        95 Jun  3 13:11 pilot_heartbeat.json
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas      1036 Jun  3 13:11 memory_monitor_summary.json
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas    308124 Jun  3 13:11 log.44871837._060048.job.log.tgz.1
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas      7735 Jun  3 13:12 heartbeat.json
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas      4608 Jun  3 13:12 pilotlog.txt
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas    425612 Jun  3 13:12 log.44871837._060048.job.log.1
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 13:12 output.list
2025-06-03 15:12:28 (5888): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 13:12 runtime_log
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas    757760 Jun  3 13:12 result.tar.gz
2025-06-03 15:12:28 (5888): Guest Log: -rw-r--r--. 1 atlas atlas      8625 Jun  3 13:12 runtime_log.err
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas       664 Jun  3 13:12 FMlKDm2Gyd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5BYKDmk8mXyn.diag
2025-06-03 15:12:28 (5888): Guest Log: Looking for outputfile HITS.44871837._060048.pool.root.1
2025-06-03 15:12:28 (5888): Guest Log: HITS file was successfully produced
2025-06-03 15:12:28 (5888): Guest Log: -rw-------. 1 atlas atlas 191839421 Jun  3 13:11 /home/atlas/RunAtlas/HITS.44871837._060048.pool.root.1
2025-06-03 15:12:29 (5888): Guest Log: Successfully finished the ATLAS job!
2025-06-03 15:12:29 (5888): Guest Log: Copying the results back to the shared directory!
2025-06-03 15:12:29 (5888): Guest Log:  *** Contents of shared directory: ***
2025-06-03 15:12:29 (5888): Guest Log: total 409732
2025-06-03 15:12:29 (5888): Guest Log: -rwxrwxrwx. 1 root root 226411026 Jun  3 11:43 ATLAS.root_0
2025-06-03 15:12:29 (5888): Guest Log: -rwxrwxrwx. 1 root root 191839421 Jun  3 13:12 HITS.pool.root.1
2025-06-03 15:12:29 (5888): Guest Log: -rwxrwxrwx. 1 root root     12334 Jun  3 11:43 init_data.xml
2025-06-03 15:12:29 (5888): Guest Log: -rwxrwxrwx. 1 root root    517092 Jun  3 08:23 input.tar.gz
2025-06-03 15:12:29 (5888): Guest Log: -rwxrwxrwx. 1 root root    757760 Jun  3 13:12 result.tar.gz
2025-06-03 15:12:29 (5888): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  3 08:23 start_atlas.sh
2025-06-03 15:12:29 (5888): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 15:12:29 (5888): VM Completion File Detected.
2025-06-03 15:12:29 (5888): Powering off VM.
2025-06-03 15:12:30 (5888): Successfully stopped VM.
2025-06-03 15:12:30 (5888): Deregistering VM. (boinc_995c6654519f39c3, slot#1)
2025-06-03 15:12:30 (5888): Removing network bandwidth throttle group from VM.
2025-06-03 15:12:30 (5888): Removing VM from VirtualBox.
15:12:35 (5888): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN