Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:58:54 (2594971): wrapper (7.7.26015): starting
03:58:54 (2594971): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:58:54] Arguments: --nthreads 8
[2025-06-03 03:58:54] Threads: 8
[2025-06-03 03:58:54] Checking for CVMFS
[2025-06-03 03:58:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:58:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:58:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:58:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:58:54] 2.12.6.0 6121 113873 336488 146734 1 187 24605983 32935937 3621 130560 2 447454733 99.687 381708344 22804 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 03:58:54] CVMFS is ok
[2025-06-03 03:58:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:58:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:58:54] Further information can be found at the LHC@home message board.
[2025-06-03 03:58:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:58:54] Checking for apptainer binary...
[2025-06-03 03:58:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:58:54] Running /usr/bin/apptainer --version
[2025-06-03 03:58:54] apptainer version 1.4.1-1.el9
[2025-06-03 03:58:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:58:54] c-8-1.aglt2.org
[2025-06-03 03:58:54] apptainer works
[2025-06-03 03:58:54] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:58:54] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:58:55] Starting ATLAS job with PandaID=6677454728
[2025-06-03 03:58:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:27:43]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:27:43]  guid=48eeb9ae-81bd-49e8-8a06-f39b90994a3f
[2025-06-03 05:27:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 05:27:43]  is_altstaged=None
[2025-06-03 05:27:43]  is_tar=False
[2025-06-03 05:27:43]  lfn=log.45006595._018183.job.log.tgz.1
[2025-06-03 05:27:43]  mtime=0
[2025-06-03 05:27:43]  protocol_id=None
[2025-06-03 05:27:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 05:27:43]  replicas=None
[2025-06-03 05:27:43]  scope=mc23_13p6TeV
[2025-06-03 05:27:43]  status=None
[2025-06-03 05:27:43]  status_code=0
[2025-06-03 05:27:43]  storage_token=
[2025-06-03 05:27:43]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6677454728/log.45006595._018183.job.log.tgz.1
[2025-06-03 05:27:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/b4/log.45006595._018183.job.log.tgz.1
[2025-06-03 05:27:43]  workdir=None
[2025-06-03 05:27:43] ]
[2025-06-03 05:27:43] 2025-06-03 09:27:24,168 | INFO     | transferring file log.45006595._018183.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6677454728/log.45006595._018183.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 05:27:43] 2025-06-03 09:27:24,168 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6677454728/log.45006595._018183.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._018183.job
[2025-06-03 05:27:43] 2025-06-03 09:27:24,180 | INFO     | adding to output.list: log.45006595._018183.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/b4/log.45006595._018183.job.log.tg
[2025-06-03 05:27:43] 2025-06-03 09:27:24,181 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 05:27:43] 2025-06-03 09:27:24,181 | INFO     | summary of transferred files:
[2025-06-03 05:27:43] 2025-06-03 09:27:24,181 | INFO     |  -- lfn=log.45006595._018183.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 05:27:43] 2025-06-03 09:27:24,181 | INFO     | stage-out finished correctly
[2025-06-03 05:27:43] 2025-06-03 09:27:25,626 | INFO     | monitor loop #393: job 0:6677454728 is in state 'finished'
[2025-06-03 05:27:43] 2025-06-03 09:27:25,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:27:43] 2025-06-03 09:27:26,637 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 05:27:43] 2025-06-03 09:27:26,874 | INFO     | job 6677454728 has state=finished
[2025-06-03 05:27:43] 2025-06-03 09:27:26,874 | INFO     | preparing for final server update for job 6677454728 in state='finished'
[2025-06-03 05:27:43] 2025-06-03 09:27:26,875 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:27:43] 2025-06-03 09:27:26,875 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:27:43] 2025-06-03 09:27:26,875 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:27:43] 2025-06-03 09:27:26,876 | INFO     | job 6677454728 has finished - writing final server update
[2025-06-03 05:27:43] 2025-06-03 09:27:26,876 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:27:43] 2025-06-03 09:27:26,890 | INFO     | executing command: lscpu
[2025-06-03 05:27:43] 2025-06-03 09:27:26,943 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:27:43] 2025-06-03 09:27:26,968 | INFO     | PID=2598612 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 05:27:43] 2025-06-03 09:27:26,968 | INFO     | .. there are 5 such processes running
[2025-06-03 05:27:43] 2025-06-03 09:27:28,129 | INFO     | monitor loop #394: job 0:6677454728 is in state 'finished'
[2025-06-03 05:27:43] 2025-06-03 09:27:28,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:27:43] 2025-06-03 09:27:29,504 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 05:27:43] 2025-06-03 09:27:29,504 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677454728/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:27:43] 2025-06-03 09:27:29,505 | INFO     | extracted standard info from prmon json
[2025-06-03 05:27:43] 2025-06-03 09:27:29,505 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:27:43] 2025-06-03 09:27:29,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:27:43] 2025-06-03 09:27:29,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:27:43] 2025-06-03 09:27:29,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:27:43] 2025-06-03 09:27:29,508 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:27:43] 2025-06-03 09:27:29,508 | INFO     | sum of square deviations: 158737860.0
[2025-06-03 05:27:43] 2025-06-03 09:27:29,509 | INFO     | sum of deviations: 10573835861.5
[2025-06-03 05:27:43] 2025-06-03 09:27:29,509 | INFO     | mean x: 1748940284.5
[2025-06-03 05:27:43] 2025-06-03 09:27:29,509 | INFO     | mean y: 2091980.7875
[2025-06-03 05:27:43] 2025-06-03 09:27:29,509 | INFO     | -- intersect: -116498202907.07422
[2025-06-03 05:27:43] 2025-06-03 09:27:29,509 | INFO     | intersect: -116498202907.07422
[2025-06-03 05:27:43] 2025-06-03 09:27:29,510 | INFO     | chi2: 1.0239523378573616
[2025-06-03 05:27:43] 2025-06-03 09:27:29,510 | INFO     | -- intersect: -116498202907.07422
[2025-06-03 05:27:43] 2025-06-03 09:27:29,510 | INFO     | current memory leak: 66.61 B/s (using 80 data points, chi2=1.02)
[2025-06-03 05:27:43] 2025-06-03 09:27:29,510 | INFO     | ..............................
[2025-06-03 05:27:43] 2025-06-03 09:27:29,511 | INFO     | . Timing measurements:
[2025-06-03 05:27:43] 2025-06-03 09:27:29,511 | INFO     | . get job = 0 s
[2025-06-03 05:27:43] 2025-06-03 09:27:29,511 | INFO     | . initial setup = 2 s
[2025-06-03 05:27:43] 2025-06-03 09:27:29,511 | INFO     | . payload setup = 6 s
[2025-06-03 05:27:43] 2025-06-03 09:27:29,511 | INFO     | . stage-in = 0 s
[2025-06-03 05:27:43] 2025-06-03 09:27:29,511 | INFO     | . payload execution = 5273 s
[2025-06-03 05:27:43] 2025-06-03 09:27:29,511 | INFO     | . stage-out = 0 s
[2025-06-03 05:27:43] 2025-06-03 09:27:29,511 | INFO     | . log creation = 0 s
[2025-06-03 05:27:43] 2025-06-03 09:27:29,511 | INFO     | ..............................
[2025-06-03 05:27:43] 2025-06-03 09:27:29,583 | INFO     | 
[2025-06-03 05:27:43] 2025-06-03 09:27:29,583 | INFO     | job summary report
[2025-06-03 05:27:43] 2025-06-03 09:27:29,583 | INFO     | --------------------------------------------------
[2025-06-03 05:27:43] 2025-06-03 09:27:29,583 | INFO     | PanDA job id: 6677454728
[2025-06-03 05:27:43] 2025-06-03 09:27:29,583 | INFO     | task id: 45006595
[2025-06-03 05:27:43] 2025-06-03 09:27:29,584 | INFO     | errors: (none)
[2025-06-03 05:27:43] 2025-06-03 09:27:29,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:27:43] 2025-06-03 09:27:29,584 | INFO     | pilot state: finished 
[2025-06-03 05:27:43] 2025-06-03 09:27:29,584 | INFO     | transexitcode: 0
[2025-06-03 05:27:43] 2025-06-03 09:27:29,584 | INFO     | exeerrorcode: 0
[2025-06-03 05:27:43] 2025-06-03 09:27:29,584 | INFO     | exeerrordiag: 
[2025-06-03 05:27:43] 2025-06-03 09:27:29,584 | INFO     | exitcode: 0
[2025-06-03 05:27:43] 2025-06-03 09:27:29,584 | INFO     | exitmsg: OK
[2025-06-03 05:27:43] 2025-06-03 09:27:29,584 | INFO     | cpuconsumptiontime: 36302 s
[2025-06-03 05:27:43] 2025-06-03 09:27:29,585 | INFO     | nevents: 400
[2025-06-03 05:27:43] 2025-06-03 09:27:29,585 | INFO     | neventsw: 0
[2025-06-03 05:27:43] 2025-06-03 09:27:29,585 | INFO     | pid: 2605594
[2025-06-03 05:27:43] 2025-06-03 09:27:29,585 | INFO     | pgrp: 2605594
[2025-06-03 05:27:43] 2025-06-03 09:27:29,585 | INFO     | corecount: 8
[2025-06-03 05:27:43] 2025-06-03 09:27:29,585 | INFO     | event service: False
[2025-06-03 05:27:43] 2025-06-03 09:27:29,585 | INFO     | sizes: {0: 2405182, 4: 2405388, 11: 2405416, 5282: 2431724, 5283: 2431723, 5284: 2440720, 5286: 2440904, 5289: 2441074}
[2025-06-03 05:27:43] 2025-06-03 09:27:29,585 | INFO     | --------------------------------------------------
[2025-06-03 05:27:43] 2025-06-03 09:27:29,585 | INFO     | 
[2025-06-03 05:27:43] 2025-06-03 09:27:29,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 05:27:43] 2025-06-03 09:27:29,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,601 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:27:43] 2025-06-03 09:27:29,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:27:43] 2025-06-03 09:27:29,601 | INFO     | job 6677454728 has completed (purged errors)
[2025-06-03 05:27:43] 2025-06-03 09:27:29,601 | INFO     | overall cleanup function is called
[2025-06-03 05:27:43] 2025-06-03 09:27:30,609 | INFO     | --- collectZombieJob: --- 10, [2605594]
[2025-06-03 05:27:43] 2025-06-03 09:27:30,609 | INFO     | zombie collector waiting for pid 2605594
[2025-06-03 05:27:43] 2025-06-03 09:27:30,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:27:43] 2025-06-03 09:27:30,610 | INFO     | collected zombie processes
[2025-06-03 05:27:43] 2025-06-03 09:27:30,610 | INFO     | will attempt to kill all subprocesses of pid=2605594
[2025-06-03 05:27:43] 2025-06-03 09:27:30,786 | INFO     | process IDs to be killed: [2605594] (in reverse order)
[2025-06-03 05:27:43] 2025-06-03 09:27:30,829 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:27:43] 2025-06-03 09:27:30,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:27:43] 2025-06-03 09:27:30,833 | INFO     | did not find any defunct processes belonging to 2605594
[2025-06-03 05:27:43] 2025-06-03 09:27:30,837 | INFO     | did not find any defunct processes belonging to 2605594
[2025-06-03 05:27:43] 2025-06-03 09:27:30,837 | INFO     | ready for new job
[2025-06-03 05:27:43] 2025-06-03 09:27:30,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:27:43] 2025-06-03 09:27:30,839 | INFO     | **************************************
[2025-06-03 05:27:43] 2025-06-03 09:27:30,839 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:27:43] 2025-06-03 09:27:30,839 | INFO     | **************************************
[2025-06-03 05:27:43] 2025-06-03 09:27:30,839 | INFO     | 
[2025-06-03 05:27:43] 2025-06-03 09:27:30,853 | INFO     | architecture information:
[2025-06-03 05:27:43] 2025-06-03 09:27:30,853 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:27:43] 2025-06-03 09:27:30,861 | INFO     | cat /etc/os-release:
[2025-06-03 05:27:43] NAME="CentOS Linux"
[2025-06-03 05:27:43] VERSION="7 (Core)"
[2025-06-03 05:27:43] ID="centos"
[2025-06-03 05:27:43] ID_LIKE="rhel fedora"
[2025-06-03 05:27:43] VERSION_ID="7"
[2025-06-03 05:27:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:27:43] ANSI_COLOR="0;31"
[2025-06-03 05:27:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:27:43] HOME_URL="https://www.centos.org/"
[2025-06-03 05:27:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:27:43] 
[2025-06-03 05:27:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:27:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:27:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:27:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:27:43] 
[2025-06-03 05:27:43] 2025-06-03 09:27:30,861 | INFO     | **************************************
[2025-06-03 05:27:43] 2025-06-03 09:27:31,364 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 05:27:43] 2025-06-03 09:27:31,373 | INFO     | sufficient remaining disk space (74087137280 B)
[2025-06-03 05:27:43] 2025-06-03 09:27:31,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:27:43] 2025-06-03 09:27:31,373 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:27:43] 2025-06-03 09:27:31,373 | INFO     | update_server=False
[2025-06-03 05:27:43] 2025-06-03 09:27:31,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:27:43] 2025-06-03 09:27:31,373 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:27:43] 2025-06-03 09:27:31,374 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 05:27:43] 2025-06-03 09:27:31,374 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:27:43] 2025-06-03 09:27:31,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:27:43] 2025-06-03 09:27:31,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:27:43] 2025-06-03 09:27:31,594 | INFO     | all payload control threads have been joined
[2025-06-03 05:27:43] 2025-06-03 09:27:31,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:27:43] 2025-06-03 09:27:31,637 | INFO     | aborting loop
[2025-06-03 05:27:43] 2025-06-03 09:27:31,699 | INFO     | all data control threads have been joined
[2025-06-03 05:27:43] 2025-06-03 09:27:32,246 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:27:43] 2025-06-03 09:27:32,378 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:32,379 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:32,407 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:32,448 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:32,600 | INFO     | [payload] control thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:32,642 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:32,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:32,696 | INFO     | all job control threads have been joined
[2025-06-03 05:27:43] 2025-06-03 09:27:32,704 | INFO     | [data] control thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:32,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:27:43] 2025-06-03 09:27:32,759 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:33,093 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:33,124 | INFO     | [job] validate thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:33,174 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:33,702 | INFO     | [job] control thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:33,808 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:34,252 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:36,737 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:27:43] 2025-06-03 09:27:38,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425771349824)>', '<ExcThread(monitor, started 140425247561472)>']
[2025-06-03 05:27:43] 2025-06-03 09:27:38,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:27:43] 2025-06-03 09:27:38,405 | INFO     | [monitor] control thread has ended
[2025-06-03 05:27:43] 2025-06-03 09:27:43,051 | INFO     | all workflow threads have been joined
[2025-06-03 05:27:43] 2025-06-03 09:27:43,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:27:43] 2025-06-03 09:27:43,052 | INFO     | traces error code: 0
[2025-06-03 05:27:43] 2025-06-03 09:27:43,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:27:43] 2025-06-03 09:27:43,159 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:27:43] 2025-06-03 09:27:43,161 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:27:43] 2025-06-03 09:27:43,162 [wrapper] pilotpid: 2598612
[2025-06-03 05:27:43] 2025-06-03 09:27:43,164 [wrapper] Pilot exit status: 0
[2025-06-03 05:27:43] 2025-06-03 09:27:43,171 [wrapper] pandaids: 6677454728
[2025-06-03 05:27:43] 2025-06-03 09:27:43,215 [wrapper] cleanup supervisor_pilot 2778903 2598613
[2025-06-03 05:27:43] 2025-06-03 09:27:43,218 [wrapper] Test setup, not cleaning
[2025-06-03 05:27:43] 2025-06-03 09:27:43,220 [wrapper] apfmon messages muted
[2025-06-03 05:27:43] 2025-06-03 09:27:43,221 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:27:43] 2025-06-03 09:27:43,223 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:27:43]  *** Error codes and diagnostics ***
[2025-06-03 05:27:43]     "exeErrorCode": 0,
[2025-06-03 05:27:43]     "exeErrorDiag": "",
[2025-06-03 05:27:43]     "pilotErrorCode": 0,
[2025-06-03 05:27:43]     "pilotErrorDiag": "",
[2025-06-03 05:27:43]  *** Listing of results directory ***
[2025-06-03 05:27:43] total 386640
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 22:50 pilot3.tar.gz
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 23:14 queuedata.json
[2025-06-03 05:27:43] -rwx------. 1 boincer umatlas     37140 Jun  2 23:17 runpilot2-wrapper.sh
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas       100 Jun  3 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:27:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 03:58 run_atlas
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas       105 Jun  3 03:58 job.xml
[2025-06-03 05:27:43] -rw-r--r--. 2 boincer umatlas 216843697 Jun  3 03:58 EVNT.45006593._000728.pool.root.1
[2025-06-03 05:27:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:58 start_atlas.sh
[2025-06-03 05:27:43] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 03:58 shared
[2025-06-03 05:27:43] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 03:58 input.tar.gz
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas         0 Jun  3 03:58 boinc_lockfile
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 03:58 pandaJob.out
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas    985499 Jun  3 03:59 agis_schedconf.cvmfs.json
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas   1603667 Jun  3 03:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:27:43] drwx------. 4 boincer umatlas      4096 Jun  3 03:59 pilot3
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas      6657 Jun  3 05:21 init_data.xml
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas        95 Jun  3 05:26 pilot_heartbeat.json
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas 173608882 Jun  3 05:26 HITS.45006595._018183.pool.root.1
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas       529 Jun  3 05:26 boinc_task_state.xml
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas      1044 Jun  3 05:27 memory_monitor_summary.json
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas    302095 Jun  3 05:27 log.45006595._018183.job.log.tgz.1
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas      7701 Jun  3 05:27 heartbeat.json
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas        27 Jun  3 05:27 wrapper_checkpoint.txt
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 05:27 boinc_mmap_file
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas      4476 Jun  3 05:27 pilotlog.txt
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas    514028 Jun  3 05:27 log.45006595._018183.job.log.1
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas       357 Jun  3 05:27 output.list
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas       620 Jun  3 05:27 runtime_log
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas    839680 Jun  3 05:27 result.tar.gz
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 05:27 runtime_log.err
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas       648 Jun  3 05:27 cCpNDm6KXg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmekhKDmshV1Uo.diag
[2025-06-03 05:27:43] -rw-r--r--. 1 boincer umatlas     21402 Jun  3 05:27 stderr.txt
[2025-06-03 05:27:43] HITS file was successfully produced:
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas 173608882 Jun  3 05:26 shared/HITS.pool.root.1
[2025-06-03 05:27:43]  *** Contents of shared directory: ***
[2025-06-03 05:27:43] total 382644
[2025-06-03 05:27:43] -rw-r--r--. 2 boincer umatlas 216843697 Jun  3 03:58 ATLAS.root_0
[2025-06-03 05:27:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:58 start_atlas.sh
[2025-06-03 05:27:43] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 03:58 input.tar.gz
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas 173608882 Jun  3 05:26 HITS.pool.root.1
[2025-06-03 05:27:43] -rw-------. 1 boincer umatlas    839680 Jun  3 05:27 result.tar.gz
05:27:45 (2594971): run_atlas exited; CPU time 36413.930970
05:27:45 (2594971): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN