Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:55:20 (19756): wrapper (7.7.26015): starting
03:55:20 (19756): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:55:20] Arguments: --nthreads 8
[2025-06-03 03:55:20] Threads: 8
[2025-06-03 03:55:20] Checking for CVMFS
[2025-06-03 03:55:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:55:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:55:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:55:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:55:21] 2.11.2.0 3220 107286 450996 146734 3 286 12791182 18432000 3453 130560 0 481048596 99.116 927300842 34557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 03:55:21] CVMFS is ok
[2025-06-03 03:55:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:55:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:55:21] Further information can be found at the LHC@home message board.
[2025-06-03 03:55:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:55:21] Checking for apptainer binary...
[2025-06-03 03:55:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:55:21] Running /usr/bin/apptainer --version
[2025-06-03 03:55:21] apptainer version 1.3.2-1.el7
[2025-06-03 03:55:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:55:22] c-211-11.aglt2.org
[2025-06-03 03:55:22] apptainer works
[2025-06-03 03:55:22] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:55:22] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:55:22] Starting ATLAS job with PandaID=6666850690
[2025-06-03 03:55:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:50:58]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:50:58] 2025-06-03 09:50:39,617 | INFO     | job 6666850690 has finished - writing final server update
[2025-06-03 05:50:58] 2025-06-03 09:50:39,618 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:50:58] 2025-06-03 09:50:39,621 | INFO     | executing command: lscpu
[2025-06-03 05:50:58] 2025-06-03 09:50:39,668 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:50:58] 2025-06-03 09:50:40,114 | INFO     | PID=23360 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 05:50:58] 2025-06-03 09:50:40,114 | INFO     | .. there are 4 such processes running
[2025-06-03 05:50:58] 2025-06-03 09:50:41,180 | INFO     | monitor loop #521: job 0:6666850690 is in state 'finished'
[2025-06-03 05:50:58] 2025-06-03 09:50:41,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:50:58] 2025-06-03 09:50:43,494 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 05:50:58] 2025-06-03 09:50:43,494 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6666850690/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:50:58] 2025-06-03 09:50:43,495 | INFO     | extracted standard info from prmon json
[2025-06-03 05:50:58] 2025-06-03 09:50:43,495 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:50:58] 2025-06-03 09:50:43,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:50:58] 2025-06-03 09:50:43,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:50:58] 2025-06-03 09:50:43,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:50:58] 2025-06-03 09:50:43,497 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:50:58] 2025-06-03 09:50:43,497 | INFO     | sum of square deviations: 447383272.0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,497 | INFO     | sum of deviations: 7518898979.0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,497 | INFO     | mean x: 1748940773.0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,497 | INFO     | mean y: 2487710.9557522126
[2025-06-03 05:50:58] 2025-06-03 09:50:43,497 | INFO     | -- intersect: -29390897816.52363
[2025-06-03 05:50:58] 2025-06-03 09:50:43,498 | INFO     | intersect: -29390897816.52363
[2025-06-03 05:50:58] 2025-06-03 09:50:43,498 | INFO     | chi2: 1.4481346749641524
[2025-06-03 05:50:58] 2025-06-03 09:50:43,498 | INFO     | sum of square deviations: 390582207.0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,498 | INFO     | sum of deviations: 7145115988.999999
[2025-06-03 05:50:58] 2025-06-03 09:50:43,498 | INFO     | mean x: 1748940620.5
[2025-06-03 05:50:58] 2025-06-03 09:50:43,498 | INFO     | mean y: 2486709.592592593
[2025-06-03 05:50:58] 2025-06-03 09:50:43,498 | INFO     | -- intersect: -31991760256.568184
[2025-06-03 05:50:58] 2025-06-03 09:50:43,498 | INFO     | intersect: -31991760256.568184
[2025-06-03 05:50:58] 2025-06-03 09:50:43,499 | INFO     | chi2: 1.4505968406452807
[2025-06-03 05:50:58] 2025-06-03 09:50:43,499 | INFO     | current chi2=1.4505968406452807 (change=-0.17002325292634027 %)
[2025-06-03 05:50:58] 2025-06-03 09:50:43,499 | INFO     | right removable region: 107
[2025-06-03 05:50:58] 2025-06-03 09:50:43,499 | INFO     | sum of square deviations: 390582207.0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,499 | INFO     | sum of deviations: -8354545604.000005
[2025-06-03 05:50:58] 2025-06-03 09:50:43,499 | INFO     | mean x: 1748940925.5
[2025-06-03 05:50:58] 2025-06-03 09:50:43,499 | INFO     | mean y: 2529427.037037037
[2025-06-03 05:50:58] 2025-06-03 09:50:43,499 | INFO     | -- intersect: 37412340880.101326
[2025-06-03 05:50:58] 2025-06-03 09:50:43,499 | INFO     | intersect: 37412340880.101326
[2025-06-03 05:50:58] 2025-06-03 09:50:43,500 | INFO     | chi2: 0.0751741237640901
[2025-06-03 05:50:58] 2025-06-03 09:50:43,500 | INFO     | current chi2=0.0751741237640901 (change=94.80889967875737 %)
[2025-06-03 05:50:58] 2025-06-03 09:50:43,500 | INFO     | sum of square deviations: 338804492.0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,500 | INFO     | sum of deviations: -6498715947.000002
[2025-06-03 05:50:58] 2025-06-03 09:50:43,500 | INFO     | mean x: 1748941078.0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,500 | INFO     | mean y: 2523839.834951456
[2025-06-03 05:50:58] 2025-06-03 09:50:43,500 | INFO     | -- intersect: 33549514928.613003
[2025-06-03 05:50:58] 2025-06-03 09:50:43,500 | INFO     | intersect: 33549514928.613003
[2025-06-03 05:50:58] 2025-06-03 09:50:43,500 | INFO     | chi2: 0.06270721543745064
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | current chi2=0.06270721543745064 (change=16.58404209108291 %)
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | left removable region: 20
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | sum of square deviations: 204163828.0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | sum of deviations: 59929206.00000006
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | mean x: 1748941200.0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | mean y: 2500540.7816091953
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | -- intersect: -510874715.17552006
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | intersect: -510874715.17552006
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | chi2: 0.004084674793718657
[2025-06-03 05:50:58] 2025-06-03 09:50:43,501 | INFO     | -- intersect: -510874715.17552006
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | current memory leak: 0.29 B/s (using 87 data points, chi2=0.00)
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | ..............................
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | . Timing measurements:
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | . get job = 0 s
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | . initial setup = 2 s
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | . payload setup = 6 s
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | . stage-in = 0 s
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | . payload execution = 6878 s
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | . stage-out = 0 s
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | . log creation = 0 s
[2025-06-03 05:50:58] 2025-06-03 09:50:43,502 | INFO     | ..............................
[2025-06-03 05:50:58] 2025-06-03 09:50:43,556 | INFO     | 
[2025-06-03 05:50:58] 2025-06-03 09:50:43,557 | INFO     | job summary report
[2025-06-03 05:50:58] 2025-06-03 09:50:43,557 | INFO     | --------------------------------------------------
[2025-06-03 05:50:58] 2025-06-03 09:50:43,557 | INFO     | PanDA job id: 6666850690
[2025-06-03 05:50:58] 2025-06-03 09:50:43,557 | INFO     | task id: 44871837
[2025-06-03 05:50:58] 2025-06-03 09:50:43,557 | INFO     | errors: (none)
[2025-06-03 05:50:58] 2025-06-03 09:50:43,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:50:58] 2025-06-03 09:50:43,557 | INFO     | pilot state: finished 
[2025-06-03 05:50:58] 2025-06-03 09:50:43,557 | INFO     | transexitcode: 0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,557 | INFO     | exeerrorcode: 0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | exeerrordiag: 
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | exitcode: 0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | exitmsg: OK
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | cpuconsumptiontime: 51140 s
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | nevents: 400
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | neventsw: 0
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | pid: 30411
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | pgrp: 30411
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | corecount: 8
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | event service: False
[2025-06-03 05:50:58] 2025-06-03 09:50:43,558 | INFO     | sizes: {0: 2405007, 1: 2405262, 5: 2405468, 12: 2405524, 6888: 2432709, 6889: 2441650, 6891: 2441834, 6897: 2442004}
[2025-06-03 05:50:58] 2025-06-03 09:50:43,559 | INFO     | --------------------------------------------------
[2025-06-03 05:50:58] 2025-06-03 09:50:43,559 | INFO     | 
[2025-06-03 05:50:58] 2025-06-03 09:50:43,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 05:50:58] 2025-06-03 09:50:43,581 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:50:58] 2025-06-03 09:50:43,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:50:58] 2025-06-03 09:50:43,584 | INFO     | job 6666850690 has completed (purged errors)
[2025-06-03 05:50:58] 2025-06-03 09:50:43,584 | INFO     | overall cleanup function is called
[2025-06-03 05:50:58] 2025-06-03 09:50:44,592 | INFO     | --- collectZombieJob: --- 10, [30411]
[2025-06-03 05:50:58] 2025-06-03 09:50:44,592 | INFO     | zombie collector waiting for pid 30411
[2025-06-03 05:50:58] 2025-06-03 09:50:44,592 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:50:58] 2025-06-03 09:50:44,593 | INFO     | collected zombie processes
[2025-06-03 05:50:58] 2025-06-03 09:50:44,593 | INFO     | will attempt to kill all subprocesses of pid=30411
[2025-06-03 05:50:58] 2025-06-03 09:50:44,748 | INFO     | process IDs to be killed: [30411] (in reverse order)
[2025-06-03 05:50:58] 2025-06-03 09:50:44,798 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:50:58] 2025-06-03 09:50:44,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:50:58] 2025-06-03 09:50:44,804 | INFO     | did not find any defunct processes belonging to 30411
[2025-06-03 05:50:58] 2025-06-03 09:50:44,808 | INFO     | did not find any defunct processes belonging to 30411
[2025-06-03 05:50:58] 2025-06-03 09:50:44,809 | INFO     | ready for new job
[2025-06-03 05:50:58] 2025-06-03 09:50:44,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:50:58] 2025-06-03 09:50:44,811 | INFO     | **************************************
[2025-06-03 05:50:58] 2025-06-03 09:50:44,811 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:50:58] 2025-06-03 09:50:44,811 | INFO     | **************************************
[2025-06-03 05:50:58] 2025-06-03 09:50:44,811 | INFO     | 
[2025-06-03 05:50:58] 2025-06-03 09:50:44,814 | INFO     | architecture information:
[2025-06-03 05:50:58] 2025-06-03 09:50:44,814 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:50:58] 2025-06-03 09:50:44,828 | INFO     | cat /etc/os-release:
[2025-06-03 05:50:58] NAME="CentOS Linux"
[2025-06-03 05:50:58] VERSION="7 (Core)"
[2025-06-03 05:50:58] ID="centos"
[2025-06-03 05:50:58] ID_LIKE="rhel fedora"
[2025-06-03 05:50:58] VERSION_ID="7"
[2025-06-03 05:50:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:50:58] ANSI_COLOR="0;31"
[2025-06-03 05:50:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:50:58] HOME_URL="https://www.centos.org/"
[2025-06-03 05:50:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:50:58] 
[2025-06-03 05:50:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:50:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:50:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:50:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:50:58] 
[2025-06-03 05:50:58] 2025-06-03 09:50:44,829 | INFO     | **************************************
[2025-06-03 05:50:58] 2025-06-03 09:50:45,332 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 05:50:58] 2025-06-03 09:50:45,347 | INFO     | sufficient remaining disk space (56492032000 B)
[2025-06-03 05:50:58] 2025-06-03 09:50:45,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:50:58] 2025-06-03 09:50:45,347 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:50:58] 2025-06-03 09:50:45,348 | INFO     | update_server=False
[2025-06-03 05:50:58] 2025-06-03 09:50:45,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:50:58] 2025-06-03 09:50:45,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:50:58] 2025-06-03 09:50:45,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:50:58] 2025-06-03 09:50:45,348 | INFO     | aborting loop
[2025-06-03 05:50:58] 2025-06-03 09:50:45,483 | INFO     | all data control threads have been joined
[2025-06-03 05:50:58] 2025-06-03 09:50:46,088 | INFO     | all payload control threads have been joined
[2025-06-03 05:50:58] 2025-06-03 09:50:46,131 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:50:58] 2025-06-03 09:50:46,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:50:58] 2025-06-03 09:50:46,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:50:58] 2025-06-03 09:50:46,245 | INFO     | all job control threads have been joined
[2025-06-03 05:50:58] 2025-06-03 09:50:46,350 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:46,353 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:46,354 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:46,391 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:46,413 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:46,414 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:46,457 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:46,489 | INFO     | [data] control thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:46,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:50:58] 2025-06-03 09:50:46,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:47,094 | INFO     | [payload] control thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:47,178 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:47,250 | INFO     | [job] control thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:47,489 | INFO     | [job] validate thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:47,528 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:47,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:50:58] 2025-06-03 09:50:48,536 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:51,979 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:50:58] 2025-06-03 09:50:52,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139848531060544)>', '<ExcThread(monitor, started 139847960360704)>']
[2025-06-03 05:50:58] 2025-06-03 09:50:53,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:50:58] 2025-06-03 09:50:53,161 | INFO     | [monitor] control thread has ended
[2025-06-03 05:50:58] 2025-06-03 09:50:57,907 | INFO     | all workflow threads have been joined
[2025-06-03 05:50:58] 2025-06-03 09:50:57,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:50:58] 2025-06-03 09:50:57,907 | INFO     | traces error code: 0
[2025-06-03 05:50:58] 2025-06-03 09:50:57,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:50:58] 2025-06-03 09:50:58,038 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:50:58] 2025-06-03 09:50:58,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:50:58] 2025-06-03 09:50:58,042 [wrapper] pilotpid: 23360
[2025-06-03 05:50:58] 2025-06-03 09:50:58,044 [wrapper] Pilot exit status: 0
[2025-06-03 05:50:58] 2025-06-03 09:50:58,051 [wrapper] pandaids: 6666850690
[2025-06-03 05:50:58] 2025-06-03 09:50:58,084 [wrapper] cleanup supervisor_pilot 21000 23361
[2025-06-03 05:50:58] 2025-06-03 09:50:58,086 [wrapper] Test setup, not cleaning
[2025-06-03 05:50:58] 2025-06-03 09:50:58,089 [wrapper] apfmon messages muted
[2025-06-03 05:50:58] 2025-06-03 09:50:58,091 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:50:58] 2025-06-03 09:50:58,093 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:50:58]  *** Error codes and diagnostics ***
[2025-06-03 05:50:58]     "exeErrorCode": 0,
[2025-06-03 05:50:58]     "exeErrorDiag": "",
[2025-06-03 05:50:58]     "pilotErrorCode": 0,
[2025-06-03 05:50:58]     "pilotErrorDiag": "",
[2025-06-03 05:50:58]  *** Listing of results directory ***
[2025-06-03 05:50:58] total 419996
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas      5111 May 27 04:43 queuedata.json
[2025-06-03 05:50:58] -rwx------ 1 boincer umatlas     37140 May 27 04:47 runpilot2-wrapper.sh
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas       100 Jun  3 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:50:58] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 03:55 run_atlas
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas       105 Jun  3 03:55 job.xml
[2025-06-03 05:50:58] -rw-r--r-- 2 boincer umatlas 224331494 Jun  3 03:55 EVNT.44871834._002552.pool.root.1
[2025-06-03 05:50:58] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 03:55 start_atlas.sh
[2025-06-03 05:50:58] drwxrwx--x 2 boincer umatlas      4096 Jun  3 03:55 shared
[2025-06-03 05:50:58] -rw-r--r-- 2 boincer umatlas    508879 Jun  3 03:55 input.tar.gz
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas         0 Jun  3 03:55 boinc_lockfile
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas      2559 Jun  3 03:55 pandaJob.out
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas    985499 Jun  3 03:55 agis_schedconf.cvmfs.json
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas   1603667 Jun  3 03:55 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:50:58] drwx------ 4 boincer umatlas      4096 Jun  3 03:55 pilot3
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas      6131 Jun  3 05:46 init_data.xml
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas        95 Jun  3 05:49 pilot_heartbeat.json
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas 199899224 Jun  3 05:50 HITS.44871837._064770.pool.root.1
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas       529 Jun  3 05:50 boinc_task_state.xml
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas      1058 Jun  3 05:50 memory_monitor_summary.json
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas    342859 Jun  3 05:50 log.44871837._064770.job.log.tgz.1
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas      7735 Jun  3 05:50 heartbeat.json
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 05:50 boinc_mmap_file
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas        27 Jun  3 05:50 wrapper_checkpoint.txt
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas      4353 Jun  3 05:50 pilotlog.txt
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas    661037 Jun  3 05:50 log.44871837._064770.job.log.1
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas       357 Jun  3 05:50 output.list
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas       620 Jun  3 05:50 runtime_log
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas   1024000 Jun  3 05:50 result.tar.gz
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas       657 Jun  3 05:50 T6TNDmZ94d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpxYKDmIetuzn.diag
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 05:50 runtime_log.err
[2025-06-03 05:50:58] -rw-r--r-- 1 boincer umatlas     21158 Jun  3 05:50 stderr.txt
[2025-06-03 05:50:58] HITS file was successfully produced:
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas 199899224 Jun  3 05:50 shared/HITS.pool.root.1
[2025-06-03 05:50:58]  *** Contents of shared directory: ***
[2025-06-03 05:50:58] total 415816
[2025-06-03 05:50:58] -rw-r--r-- 2 boincer umatlas 224331494 Jun  3 03:55 ATLAS.root_0
[2025-06-03 05:50:58] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 03:55 start_atlas.sh
[2025-06-03 05:50:58] -rw-r--r-- 2 boincer umatlas    508879 Jun  3 03:55 input.tar.gz
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas 199899224 Jun  3 05:50 HITS.pool.root.1
[2025-06-03 05:50:58] -rw------- 1 boincer umatlas   1024000 Jun  3 05:50 result.tar.gz
05:50:59 (19756): run_atlas exited; CPU time 51211.433156
05:50:59 (19756): called boinc_finish(0)

</stderr_txt>
]]>

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