Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:47:13 (1456004): wrapper (7.7.26015): starting
03:47:13 (1456004): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:47:13] Arguments: --nthreads 8
[2025-06-03 03:47:13] Threads: 8
[2025-06-03 03:47:13] Checking for CVMFS
[2025-06-03 03:47:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:47:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:47:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:47:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:47:13] 2.12.6.0 3036893 21579 427064 146734 3 290 32837729 32935937 9656 16776704 0 106842233 99.639 95999936 24439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 03:47:13] CVMFS is ok
[2025-06-03 03:47:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:47:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:47:13] Further information can be found at the LHC@home message board.
[2025-06-03 03:47:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:47:13] Checking for apptainer binary...
[2025-06-03 03:47:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:47:13] Running /usr/bin/apptainer --version
[2025-06-03 03:47:13] apptainer version 1.4.1-1.el9
[2025-06-03 03:47:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:47:13] c6-12-29-4.aglt2.org
[2025-06-03 03:47:13] apptainer works
[2025-06-03 03:47:13] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:47:13] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:47:14] Starting ATLAS job with PandaID=6677469447
[2025-06-03 03:47:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:18:41]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:18:41] 2025-06-03 09:18:20,182 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6677469447/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:18:41] 2025-06-03 09:18:20,532 | INFO     | number of running child processes to parent process 1478837: 1
[2025-06-03 05:18:41] 2025-06-03 09:18:20,533 | INFO     | maximum number of monitored processes: 6
[2025-06-03 05:18:41] 2025-06-03 09:18:20,533 | INFO     | will send heartbeat for job in 'finished' state
[2025-06-03 05:18:41] 2025-06-03 09:18:20,533 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2025-06-03 05:18:41] 2025-06-03 09:18:20,533 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:18:41] 2025-06-03 09:18:20,533 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:18:41] 2025-06-03 09:18:20,533 | INFO     | job 6677469447 has state 'running' - writing heartbeat
[2025-06-03 05:18:41] 2025-06-03 09:18:20,533 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:18:41] 2025-06-03 09:18:20,550 | INFO     | executing command: lscpu
[2025-06-03 05:18:41] 2025-06-03 09:18:20,642 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:18:41] 2025-06-03 09:18:22,361 | INFO     | job 6677469447 has state=finished
[2025-06-03 05:18:41] 2025-06-03 09:18:22,361 | INFO     | preparing for final server update for job 6677469447 in state='finished'
[2025-06-03 05:18:41] 2025-06-03 09:18:22,362 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:18:41] 2025-06-03 09:18:22,362 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:18:41] 2025-06-03 09:18:22,362 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:18:41] 2025-06-03 09:18:22,362 | INFO     | job 6677469447 has finished - writing final server update
[2025-06-03 05:18:41] 2025-06-03 09:18:22,362 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:18:41] 2025-06-03 09:18:22,380 | INFO     | executing command: lscpu
[2025-06-03 05:18:41] 2025-06-03 09:18:23,902 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 05:18:41] 2025-06-03 09:18:23,903 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6677469447/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:18:41] 2025-06-03 09:18:23,909 | INFO     | extracted standard info from prmon json
[2025-06-03 05:18:41] 2025-06-03 09:18:23,910 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:18:41] 2025-06-03 09:18:23,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:18:41] 2025-06-03 09:18:23,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:18:41] 2025-06-03 09:18:23,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:18:41] 2025-06-03 09:18:23,912 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:18:41] 2025-06-03 09:18:23,913 | INFO     | sum of square deviations: 177275882.0
[2025-06-03 05:18:41] 2025-06-03 09:18:23,913 | INFO     | sum of deviations: 15730217497.999998
[2025-06-03 05:18:41] 2025-06-03 09:18:23,913 | INFO     | mean x: 1748939669.0
[2025-06-03 05:18:41] 2025-06-03 09:18:23,913 | INFO     | mean y: 2093143.78313253
[2025-06-03 05:18:41] 2025-06-03 09:18:23,913 | INFO     | -- intersect: -155186537559.23672
[2025-06-03 05:18:41] 2025-06-03 09:18:23,913 | INFO     | intersect: -155186537559.23672
[2025-06-03 05:18:41] 2025-06-03 09:18:23,913 | INFO     | chi2: 1.0952699872794953
[2025-06-03 05:18:41] 2025-06-03 09:18:23,913 | INFO     | -- intersect: -155186537559.23672
[2025-06-03 05:18:41] 2025-06-03 09:18:23,913 | INFO     | current memory leak: 88.73 B/s (using 83 data points, chi2=1.10)
[2025-06-03 05:18:41] 2025-06-03 09:18:23,973 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:18:41] 2025-06-03 09:18:26,417 | INFO     | monitor loop #387: job 0:6677469447 is in state 'finished'
[2025-06-03 05:18:41] 2025-06-03 09:18:26,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:18:41] 2025-06-03 09:18:26,779 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 05:18:41] 2025-06-03 09:18:26,779 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6677469447/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:18:41] 2025-06-03 09:18:26,780 | INFO     | extracted standard info from prmon json
[2025-06-03 05:18:41] 2025-06-03 09:18:26,780 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:18:41] 2025-06-03 09:18:26,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:18:41] 2025-06-03 09:18:26,780 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:18:41] 2025-06-03 09:18:26,780 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:18:41] 2025-06-03 09:18:26,782 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:18:41] 2025-06-03 09:18:26,783 | INFO     | sum of square deviations: 177275882.0
[2025-06-03 05:18:41] 2025-06-03 09:18:26,783 | INFO     | sum of deviations: 15730217497.999998
[2025-06-03 05:18:41] 2025-06-03 09:18:26,783 | INFO     | mean x: 1748939669.0
[2025-06-03 05:18:41] 2025-06-03 09:18:26,783 | INFO     | mean y: 2093143.78313253
[2025-06-03 05:18:41] 2025-06-03 09:18:26,783 | INFO     | -- intersect: -155186537559.23672
[2025-06-03 05:18:41] 2025-06-03 09:18:26,783 | INFO     | intersect: -155186537559.23672
[2025-06-03 05:18:41] 2025-06-03 09:18:26,784 | INFO     | chi2: 1.0952699872794953
[2025-06-03 05:18:41] 2025-06-03 09:18:26,784 | INFO     | -- intersect: -155186537559.23672
[2025-06-03 05:18:41] 2025-06-03 09:18:26,784 | INFO     | current memory leak: 88.73 B/s (using 83 data points, chi2=1.10)
[2025-06-03 05:18:41] 2025-06-03 09:18:26,784 | INFO     | ..............................
[2025-06-03 05:18:41] 2025-06-03 09:18:26,784 | INFO     | . Timing measurements:
[2025-06-03 05:18:41] 2025-06-03 09:18:26,784 | INFO     | . get job = 0 s
[2025-06-03 05:18:41] 2025-06-03 09:18:26,784 | INFO     | . initial setup = 2 s
[2025-06-03 05:18:41] 2025-06-03 09:18:26,785 | INFO     | . payload setup = 4 s
[2025-06-03 05:18:41] 2025-06-03 09:18:26,785 | INFO     | . stage-in = 0 s
[2025-06-03 05:18:41] 2025-06-03 09:18:26,785 | INFO     | . payload execution = 5435 s
[2025-06-03 05:18:41] 2025-06-03 09:18:26,785 | INFO     | . stage-out = 0 s
[2025-06-03 05:18:41] 2025-06-03 09:18:26,785 | INFO     | . log creation = 0 s
[2025-06-03 05:18:41] 2025-06-03 09:18:26,785 | INFO     | ..............................
[2025-06-03 05:18:41] 2025-06-03 09:18:27,295 | INFO     | 
[2025-06-03 05:18:41] 2025-06-03 09:18:27,295 | INFO     | job summary report
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | --------------------------------------------------
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | PanDA job id: 6677469447
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | task id: 45006595
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | errors: (none)
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | pilot state: finished 
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | transexitcode: 0
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | exeerrorcode: 0
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | exeerrordiag: 
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | exitcode: 0
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | exitmsg: OK
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | cpuconsumptiontime: 35090 s
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | nevents: 400
[2025-06-03 05:18:41] 2025-06-03 09:18:27,296 | INFO     | neventsw: 0
[2025-06-03 05:18:41] 2025-06-03 09:18:27,297 | INFO     | pid: 1478837
[2025-06-03 05:18:41] 2025-06-03 09:18:27,297 | INFO     | pgrp: 1478837
[2025-06-03 05:18:41] 2025-06-03 09:18:27,297 | INFO     | corecount: 8
[2025-06-03 05:18:41] 2025-06-03 09:18:27,297 | INFO     | event service: False
[2025-06-03 05:18:41] 2025-06-03 09:18:27,297 | INFO     | sizes: {0: 2405183, 3: 2405389, 11: 2405417, 5443: 2431938, 5445: 2440937, 5452: 2441051}
[2025-06-03 05:18:41] 2025-06-03 09:18:27,297 | INFO     | --------------------------------------------------
[2025-06-03 05:18:41] 2025-06-03 09:18:27,297 | INFO     | 
[2025-06-03 05:18:41] 2025-06-03 09:18:27,297 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-06-03 05:18:41] 2025-06-03 09:18:27,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,316 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:18:41] 2025-06-03 09:18:27,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:18:41] 2025-06-03 09:18:27,318 | INFO     | job 6677469447 has completed (purged errors)
[2025-06-03 05:18:41] 2025-06-03 09:18:27,318 | INFO     | overall cleanup function is called
[2025-06-03 05:18:41] 2025-06-03 09:18:28,326 | INFO     | --- collectZombieJob: --- 10, [1478837]
[2025-06-03 05:18:41] 2025-06-03 09:18:28,327 | INFO     | zombie collector waiting for pid 1478837
[2025-06-03 05:18:41] 2025-06-03 09:18:28,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:18:41] 2025-06-03 09:18:28,327 | INFO     | collected zombie processes
[2025-06-03 05:18:41] 2025-06-03 09:18:28,327 | INFO     | will attempt to kill all subprocesses of pid=1478837
[2025-06-03 05:18:41] 2025-06-03 09:18:28,645 | INFO     | process IDs to be killed: [1478837] (in reverse order)
[2025-06-03 05:18:41] 2025-06-03 09:18:28,741 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:18:41] 2025-06-03 09:18:28,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:18:41] 2025-06-03 09:18:28,753 | INFO     | did not find any defunct processes belonging to 1478837
[2025-06-03 05:18:41] 2025-06-03 09:18:28,765 | INFO     | did not find any defunct processes belonging to 1478837
[2025-06-03 05:18:41] 2025-06-03 09:18:28,765 | INFO     | ready for new job
[2025-06-03 05:18:41] 2025-06-03 09:18:28,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:18:41] 2025-06-03 09:18:28,766 | INFO     | **************************************
[2025-06-03 05:18:41] 2025-06-03 09:18:28,767 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:18:41] 2025-06-03 09:18:28,767 | INFO     | **************************************
[2025-06-03 05:18:41] 2025-06-03 09:18:28,767 | INFO     | 
[2025-06-03 05:18:41] 2025-06-03 09:18:28,783 | INFO     | architecture information:
[2025-06-03 05:18:41] 2025-06-03 09:18:28,784 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:18:41] 2025-06-03 09:18:28,798 | INFO     | cat /etc/os-release:
[2025-06-03 05:18:41] NAME="CentOS Linux"
[2025-06-03 05:18:41] VERSION="7 (Core)"
[2025-06-03 05:18:41] ID="centos"
[2025-06-03 05:18:41] ID_LIKE="rhel fedora"
[2025-06-03 05:18:41] VERSION_ID="7"
[2025-06-03 05:18:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:18:41] ANSI_COLOR="0;31"
[2025-06-03 05:18:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:18:41] HOME_URL="https://www.centos.org/"
[2025-06-03 05:18:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:18:41] 
[2025-06-03 05:18:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:18:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:18:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:18:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:18:41] 
[2025-06-03 05:18:41] 2025-06-03 09:18:28,798 | INFO     | **************************************
[2025-06-03 05:18:41] 2025-06-03 09:18:29,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-06-03 05:18:41] 2025-06-03 09:18:29,318 | INFO     | sufficient remaining disk space (90339016704 B)
[2025-06-03 05:18:41] 2025-06-03 09:18:29,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:18:41] 2025-06-03 09:18:29,318 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:18:41] 2025-06-03 09:18:29,318 | INFO     | update_server=False
[2025-06-03 05:18:41] 2025-06-03 09:18:29,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:18:41] 2025-06-03 09:18:29,329 | INFO     | all job control threads have been joined
[2025-06-03 05:18:41] 2025-06-03 09:18:29,629 | INFO     | all payload control threads have been joined
[2025-06-03 05:18:41] 2025-06-03 09:18:29,718 | INFO     | all data control threads have been joined
[2025-06-03 05:18:41] 2025-06-03 09:18:29,925 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:18:41] 2025-06-03 09:18:29,926 | INFO     | aborting loop
[2025-06-03 05:18:41] 2025-06-03 09:18:30,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:18:41] 2025-06-03 09:18:30,324 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:30,331 | INFO     | [job] control thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:30,430 | INFO     | PID=1460860 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 05:18:41] 2025-06-03 09:18:30,430 | INFO     | .. there are 13 such processes running
[2025-06-03 05:18:41] 2025-06-03 09:18:30,430 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:18:41] 2025-06-03 09:18:30,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:18:41] 2025-06-03 09:18:30,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:18:41] 2025-06-03 09:18:30,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:18:41] 2025-06-03 09:18:30,610 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:30,635 | INFO     | [payload] control thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:30,724 | INFO     | [data] control thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:30,842 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:30,931 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:31,097 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:31,216 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:31,322 | INFO     | [job] validate thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:31,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:31,638 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:31,804 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:31,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:18:41] 2025-06-03 09:18:32,251 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:32,895 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:34,489 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:18:41] 2025-06-03 09:18:36,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816440362816)>', '<ExcThread(monitor, started 139815798429440)>']
[2025-06-03 05:18:41] 2025-06-03 09:18:36,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:18:41] 2025-06-03 09:18:36,461 | INFO     | [monitor] control thread has ended
[2025-06-03 05:18:41] 2025-06-03 09:18:41,455 | INFO     | all workflow threads have been joined
[2025-06-03 05:18:41] 2025-06-03 09:18:41,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:18:41] 2025-06-03 09:18:41,455 | INFO     | traces error code: 0
[2025-06-03 05:18:41] 2025-06-03 09:18:41,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:18:41] 2025-06-03 09:18:41,655 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:18:41] 2025-06-03 09:18:41,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:18:41] 2025-06-03 09:18:41,659 [wrapper] pilotpid: 1460860
[2025-06-03 05:18:41] 2025-06-03 09:18:41,662 [wrapper] Pilot exit status: 0
[2025-06-03 05:18:41] 2025-06-03 09:18:41,669 [wrapper] pandaids: 6677469447
[2025-06-03 05:18:41] 2025-06-03 09:18:41,734 [wrapper] cleanup supervisor_pilot 1814337 1460861
[2025-06-03 05:18:41] 2025-06-03 09:18:41,736 [wrapper] Test setup, not cleaning
[2025-06-03 05:18:41] 2025-06-03 09:18:41,739 [wrapper] apfmon messages muted
[2025-06-03 05:18:41] 2025-06-03 09:18:41,741 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:18:41] 2025-06-03 09:18:41,743 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:18:41]  *** Error codes and diagnostics ***
[2025-06-03 05:18:41]     "exeErrorCode": 0,
[2025-06-03 05:18:41]     "exeErrorDiag": "",
[2025-06-03 05:18:41]     "pilotErrorCode": 0,
[2025-06-03 05:18:41]     "pilotErrorDiag": "",
[2025-06-03 05:18:41]  *** Listing of results directory ***
[2025-06-03 05:18:41] total 385700
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 00:53 pilot3.tar.gz
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 00:59 queuedata.json
[2025-06-03 05:18:41] -rwx------. 1 boincer umatlas     37140 Jun  3 01:00 runpilot2-wrapper.sh
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas       100 Jun  3 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:18:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 03:47 run_atlas
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas       105 Jun  3 03:47 job.xml
[2025-06-03 05:18:41] -rw-r--r--. 2 boincer umatlas 215585578 Jun  3 03:47 EVNT.45006593._000806.pool.root.1
[2025-06-03 05:18:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:47 start_atlas.sh
[2025-06-03 05:18:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 03:47 shared
[2025-06-03 05:18:41] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 03:47 input.tar.gz
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas         0 Jun  3 03:47 boinc_lockfile
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 03:47 pandaJob.out
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas    985499 Jun  3 03:47 agis_schedconf.cvmfs.json
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas   1603667 Jun  3 03:47 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:18:41] drwx------. 4 boincer umatlas      4096 Jun  3 03:47 pilot3
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas      6861 Jun  3 05:10 init_data.xml
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas 173853566 Jun  3 05:17 HITS.45006595._020148.pool.root.1
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas       529 Jun  3 05:17 boinc_task_state.xml
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas      1036 Jun  3 05:18 memory_monitor_summary.json
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas    320858 Jun  3 05:18 log.45006595._020148.job.log.tgz.1
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas        95 Jun  3 05:18 pilot_heartbeat.json
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas      7718 Jun  3 05:18 heartbeat.json
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 05:18 boinc_mmap_file
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas        27 Jun  3 05:18 wrapper_checkpoint.txt
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas      4750 Jun  3 05:18 pilotlog.txt
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas    523728 Jun  3 05:18 log.45006595._020148.job.log.1
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas       357 Jun  3 05:18 output.list
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas       620 Jun  3 05:18 runtime_log
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas    860160 Jun  3 05:18 result.tar.gz
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas       653 Jun  3 05:18 Rx4MDmJwYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmK4hKDmyOMK0m.diag
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas      8683 Jun  3 05:18 runtime_log.err
[2025-06-03 05:18:41] -rw-r--r--. 1 boincer umatlas     21790 Jun  3 05:18 stderr.txt
[2025-06-03 05:18:41] HITS file was successfully produced:
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas 173853566 Jun  3 05:17 shared/HITS.pool.root.1
[2025-06-03 05:18:41]  *** Contents of shared directory: ***
[2025-06-03 05:18:41] total 381676
[2025-06-03 05:18:41] -rw-r--r--. 2 boincer umatlas 215585578 Jun  3 03:47 ATLAS.root_0
[2025-06-03 05:18:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:47 start_atlas.sh
[2025-06-03 05:18:41] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 03:47 input.tar.gz
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas 173853566 Jun  3 05:17 HITS.pool.root.1
[2025-06-03 05:18:41] -rw-------. 1 boincer umatlas    860160 Jun  3 05:18 result.tar.gz
05:18:43 (1456004): run_atlas exited; CPU time 35308.804304
05:18:43 (1456004): called boinc_finish(0)

</stderr_txt>
]]>

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