Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:51:53 (329772): wrapper (7.7.26015): starting
03:51:53 (329772): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:51:53] Arguments: --nthreads 8
[2025-06-03 03:51:53] Threads: 8
[2025-06-03 03:51:53] Checking for CVMFS
[2025-06-03 03:51:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:51:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:51:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:51:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:51:53] 2.12.6.0 213643 30502 366332 146734 2 231 33823713 40960001 12716 16776704 0 367412574 99.745 237945122 23092 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 03:51:53] CVMFS is ok
[2025-06-03 03:51:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:51:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:51:54] Further information can be found at the LHC@home message board.
[2025-06-03 03:51:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:51:54] Checking for apptainer binary...
[2025-06-03 03:51:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:51:54] Running /usr/bin/apptainer --version
[2025-06-03 03:51:54] apptainer version 1.4.1-1.el9
[2025-06-03 03:51:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:51:54] c7-2-17.aglt2.org
[2025-06-03 03:51:54] apptainer works
[2025-06-03 03:51:54] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:51:54] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:51:54] Starting ATLAS job with PandaID=6677469362
[2025-06-03 03:51:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:20:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:20:09]  filetype=log
[2025-06-03 05:20:09]  guid=9d98822f-35f5-4613-9501-6c0a0fd0cad5
[2025-06-03 05:20:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 05:20:09]  is_altstaged=None
[2025-06-03 05:20:09]  is_tar=False
[2025-06-03 05:20:09]  lfn=log.45006595._020063.job.log.tgz.1
[2025-06-03 05:20:09]  mtime=0
[2025-06-03 05:20:09]  protocol_id=None
[2025-06-03 05:20:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 05:20:09]  replicas=None
[2025-06-03 05:20:09]  scope=mc23_13p6TeV
[2025-06-03 05:20:09]  status=None
[2025-06-03 05:20:09]  status_code=0
[2025-06-03 05:20:09]  storage_token=
[2025-06-03 05:20:09]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6677469362/log.45006595._020063.job.log.tgz.1
[2025-06-03 05:20:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/84/log.45006595._020063.job.log.tgz.1
[2025-06-03 05:20:09]  workdir=None
[2025-06-03 05:20:09] ]
[2025-06-03 05:20:09] 2025-06-03 09:19:43,918 | INFO     | transferring file log.45006595._020063.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6677469362/log.45006595._020063.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 05:20:09] 2025-06-03 09:19:43,918 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6677469362/log.45006595._020063.job.log.tgz.1 /tmp/boinchome/slots/7/log.45006595._020063.job
[2025-06-03 05:20:09] 2025-06-03 09:19:43,939 | INFO     | adding to output.list: log.45006595._020063.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/84/log.45006595._020063.job.log.tg
[2025-06-03 05:20:09] 2025-06-03 09:19:43,940 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 05:20:09] 2025-06-03 09:19:43,940 | INFO     | summary of transferred files:
[2025-06-03 05:20:09] 2025-06-03 09:19:43,940 | INFO     |  -- lfn=log.45006595._020063.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 05:20:09] 2025-06-03 09:19:43,940 | INFO     | stage-out finished correctly
[2025-06-03 05:20:09] 2025-06-03 09:19:44,022 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 05:20:09] 2025-06-03 09:19:44,100 | INFO     | job 6677469362 has state=finished
[2025-06-03 05:20:09] 2025-06-03 09:19:44,100 | INFO     | preparing for final server update for job 6677469362 in state='finished'
[2025-06-03 05:20:09] 2025-06-03 09:19:44,159 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 05:20:09] 2025-06-03 09:19:44,159 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:20:09] 2025-06-03 09:19:44,159 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:20:09] 2025-06-03 09:19:44,160 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:20:09] 2025-06-03 09:19:44,160 | INFO     | job 6677469362 has finished - writing final server update
[2025-06-03 05:20:09] 2025-06-03 09:19:44,160 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:20:09] 2025-06-03 09:19:44,179 | INFO     | executing command: lscpu
[2025-06-03 05:20:09] 2025-06-03 09:19:44,282 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:20:09] 2025-06-03 09:19:46,412 | WARNING  | process 343983 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 05:20:09] 2025-06-03 09:19:46,413 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6677469362/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:20:09] 2025-06-03 09:19:46,919 | INFO     | number of running child processes to parent process 343983: 1
[2025-06-03 05:20:09] 2025-06-03 09:19:46,920 | INFO     | maximum number of monitored processes: 6
[2025-06-03 05:20:09] 2025-06-03 09:19:48,283 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 05:20:09] 2025-06-03 09:19:48,283 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6677469362/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:20:09] 2025-06-03 09:19:48,284 | INFO     | extracted standard info from prmon json
[2025-06-03 05:20:09] 2025-06-03 09:19:48,284 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:20:09] 2025-06-03 09:19:48,284 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:20:09] 2025-06-03 09:19:48,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:20:09] 2025-06-03 09:19:48,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:20:09] 2025-06-03 09:19:48,288 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:20:09] 2025-06-03 09:19:48,288 | INFO     | sum of square deviations: 152858680.0
[2025-06-03 05:20:09] 2025-06-03 09:19:48,289 | INFO     | sum of deviations: 17492668538.0
[2025-06-03 05:20:09] 2025-06-03 09:19:48,289 | INFO     | mean x: 1748939840.0
[2025-06-03 05:20:09] 2025-06-03 09:19:48,289 | INFO     | mean y: 2050639.9746835444
[2025-06-03 05:20:09] 2025-06-03 09:19:48,289 | INFO     | -- intersect: -200141146422.97757
[2025-06-03 05:20:09] 2025-06-03 09:19:48,289 | INFO     | intersect: -200141146422.97757
[2025-06-03 05:20:09] 2025-06-03 09:19:48,289 | INFO     | chi2: 1.1951878893211547
[2025-06-03 05:20:09] 2025-06-03 09:19:48,289 | INFO     | -- intersect: -200141146422.97757
[2025-06-03 05:20:09] 2025-06-03 09:19:48,289 | INFO     | current memory leak: 114.44 B/s (using 79 data points, chi2=1.20)
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | ..............................
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | . Timing measurements:
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | . get job = 0 s
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | . initial setup = 2 s
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | . payload setup = 8 s
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | . stage-in = 0 s
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | . payload execution = 5229 s
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | . stage-out = 0 s
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | . log creation = 0 s
[2025-06-03 05:20:09] 2025-06-03 09:19:48,290 | INFO     | ..............................
[2025-06-03 05:20:09] 2025-06-03 09:19:48,364 | INFO     | 
[2025-06-03 05:20:09] 2025-06-03 09:19:48,364 | INFO     | job summary report
[2025-06-03 05:20:09] 2025-06-03 09:19:48,364 | INFO     | --------------------------------------------------
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | PanDA job id: 6677469362
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | task id: 45006595
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | errors: (none)
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | pilot state: finished 
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | transexitcode: 0
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | exeerrorcode: 0
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | exeerrordiag: 
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | exitcode: 0
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | exitmsg: OK
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | cpuconsumptiontime: 25918 s
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | nevents: 400
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | neventsw: 0
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | pid: 343983
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | pgrp: 343983
[2025-06-03 05:20:09] 2025-06-03 09:19:48,365 | INFO     | corecount: 8
[2025-06-03 05:20:09] 2025-06-03 09:19:48,366 | INFO     | event service: False
[2025-06-03 05:20:09] 2025-06-03 09:19:48,366 | INFO     | sizes: {0: 2405182, 5: 2405388, 11: 2405444, 5241: 2431532, 5242: 2440529, 5246: 2440643}
[2025-06-03 05:20:09] 2025-06-03 09:19:48,366 | INFO     | --------------------------------------------------
[2025-06-03 05:20:09] 2025-06-03 09:19:48,366 | INFO     | 
[2025-06-03 05:20:09] 2025-06-03 09:19:48,366 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-06-03 05:20:09] 2025-06-03 09:19:48,388 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,388 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:20:09] 2025-06-03 09:19:48,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,390 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:20:09] 2025-06-03 09:19:48,390 | INFO     | job 6677469362 has completed (purged errors)
[2025-06-03 05:20:09] 2025-06-03 09:19:48,390 | INFO     | overall cleanup function is called
[2025-06-03 05:20:09] 2025-06-03 09:19:49,397 | INFO     | --- collectZombieJob: --- 10, [343983]
[2025-06-03 05:20:09] 2025-06-03 09:19:49,397 | INFO     | zombie collector waiting for pid 343983
[2025-06-03 05:20:09] 2025-06-03 09:19:49,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:20:09] 2025-06-03 09:19:49,397 | INFO     | collected zombie processes
[2025-06-03 05:20:09] 2025-06-03 09:19:49,397 | INFO     | will attempt to kill all subprocesses of pid=343983
[2025-06-03 05:20:09] 2025-06-03 09:19:49,887 | INFO     | process IDs to be killed: [343983] (in reverse order)
[2025-06-03 05:20:09] 2025-06-03 09:19:50,040 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:20:09] 2025-06-03 09:19:50,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:20:09] 2025-06-03 09:19:50,059 | INFO     | did not find any defunct processes belonging to 343983
[2025-06-03 05:20:09] 2025-06-03 09:19:50,074 | INFO     | did not find any defunct processes belonging to 343983
[2025-06-03 05:20:09] 2025-06-03 09:19:50,074 | INFO     | ready for new job
[2025-06-03 05:20:09] 2025-06-03 09:19:50,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:20:09] 2025-06-03 09:19:50,076 | INFO     | **************************************
[2025-06-03 05:20:09] 2025-06-03 09:19:50,076 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:20:09] 2025-06-03 09:19:50,076 | INFO     | **************************************
[2025-06-03 05:20:09] 2025-06-03 09:19:50,077 | INFO     | 
[2025-06-03 05:20:09] 2025-06-03 09:19:50,095 | INFO     | architecture information:
[2025-06-03 05:20:09] 2025-06-03 09:19:50,095 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:20:09] 2025-06-03 09:19:50,113 | INFO     | cat /etc/os-release:
[2025-06-03 05:20:09] NAME="CentOS Linux"
[2025-06-03 05:20:09] VERSION="7 (Core)"
[2025-06-03 05:20:09] ID="centos"
[2025-06-03 05:20:09] ID_LIKE="rhel fedora"
[2025-06-03 05:20:09] VERSION_ID="7"
[2025-06-03 05:20:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:20:09] ANSI_COLOR="0;31"
[2025-06-03 05:20:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:20:09] HOME_URL="https://www.centos.org/"
[2025-06-03 05:20:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:20:09] 
[2025-06-03 05:20:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:20:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:20:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:20:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:20:09] 
[2025-06-03 05:20:09] 2025-06-03 09:19:50,114 | INFO     | **************************************
[2025-06-03 05:20:09] 2025-06-03 09:19:50,617 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-06-03 05:20:09] 2025-06-03 09:19:50,636 | INFO     | sufficient remaining disk space (124404105216 B)
[2025-06-03 05:20:09] 2025-06-03 09:19:50,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:20:09] 2025-06-03 09:19:50,636 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:20:09] 2025-06-03 09:19:50,636 | INFO     | update_server=False
[2025-06-03 05:20:09] 2025-06-03 09:19:50,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:20:09] 2025-06-03 09:19:50,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:20:09] 2025-06-03 09:19:50,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:20:09] 2025-06-03 09:19:50,641 | INFO     | aborting loop
[2025-06-03 05:20:09] 2025-06-03 09:19:51,042 | INFO     | all data control threads have been joined
[2025-06-03 05:20:09] 2025-06-03 09:19:51,196 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:20:09] 2025-06-03 09:19:51,196 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:20:09] 2025-06-03 09:19:51,196 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:20:09] 2025-06-03 09:19:51,642 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:51,647 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:51,664 | INFO     | all job control threads have been joined
[2025-06-03 05:20:09] 2025-06-03 09:19:51,708 | INFO     | all payload control threads have been joined
[2025-06-03 05:20:09] 2025-06-03 09:19:52,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:20:09] 2025-06-03 09:19:52,047 | INFO     | [data] control thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:52,261 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:52,670 | INFO     | [job] control thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:52,670 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:52,713 | INFO     | [payload] control thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:52,732 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:52,776 | INFO     | [job] validate thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:52,895 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:53,105 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:53,225 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:53,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:20:09] 2025-06-03 09:19:54,039 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:54,380 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:19:54,643 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:20:01,393 | INFO     | job.realtimelogging is not enabled
[2025-06-03 05:20:09] 2025-06-03 09:20:02,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:20:09] 2025-06-03 09:20:04,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247629821760)>', '<ExcThread(monitor, started 140247283246848)>']
[2025-06-03 05:20:09] 2025-06-03 09:20:05,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:20:09] 2025-06-03 09:20:05,279 | INFO     | [monitor] control thread has ended
[2025-06-03 05:20:09] 2025-06-03 09:20:09,394 | INFO     | all workflow threads have been joined
[2025-06-03 05:20:09] 2025-06-03 09:20:09,394 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:20:09] 2025-06-03 09:20:09,395 | INFO     | traces error code: 0
[2025-06-03 05:20:09] 2025-06-03 09:20:09,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:20:09] 2025-06-03 09:20:09,499 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:20:09] 2025-06-03 09:20:09,502 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:20:09] 2025-06-03 09:20:09,505 [wrapper] pilotpid: 333872
[2025-06-03 05:20:09] 2025-06-03 09:20:09,507 [wrapper] Pilot exit status: 0
[2025-06-03 05:20:09] 2025-06-03 09:20:09,515 [wrapper] pandaids: 6677469362
[2025-06-03 05:20:09] 2025-06-03 09:20:09,625 [wrapper] cleanup supervisor_pilot 1215129 333873
[2025-06-03 05:20:09] 2025-06-03 09:20:09,628 [wrapper] Test setup, not cleaning
[2025-06-03 05:20:09] 2025-06-03 09:20:09,631 [wrapper] apfmon messages muted
[2025-06-03 05:20:09] 2025-06-03 09:20:09,633 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:20:09] 2025-06-03 09:20:09,636 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:20:09]  *** Error codes and diagnostics ***
[2025-06-03 05:20:09]     "exeErrorCode": 0,
[2025-06-03 05:20:09]     "exeErrorDiag": "",
[2025-06-03 05:20:09]     "pilotErrorCode": 0,
[2025-06-03 05:20:09]     "pilotErrorDiag": "",
[2025-06-03 05:20:09]  *** Listing of results directory ***
[2025-06-03 05:20:09] total 388748
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 00:53 pilot3.tar.gz
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 00:58 queuedata.json
[2025-06-03 05:20:09] -rwx------. 1 boincer umatlas     37140 Jun  3 00:58 runpilot2-wrapper.sh
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas       100 Jun  3 03:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:20:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 03:51 run_atlas
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas       105 Jun  3 03:51 job.xml
[2025-06-03 05:20:09] -rw-r--r--. 2 boincer umatlas 214740233 Jun  3 03:51 EVNT.45006593._000803.pool.root.1
[2025-06-03 05:20:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:51 start_atlas.sh
[2025-06-03 05:20:09] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 03:51 shared
[2025-06-03 05:20:09] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 03:51 input.tar.gz
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas         0 Jun  3 03:51 boinc_lockfile
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 03:51 pandaJob.out
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas    985499 Jun  3 03:52 agis_schedconf.cvmfs.json
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas   1603667 Jun  3 03:52 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:20:09] drwx------. 4 boincer umatlas      4096 Jun  3 03:52 pilot3
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas      6936 Jun  3 05:18 init_data.xml
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas 177887967 Jun  3 05:19 HITS.45006595._020063.pool.root.1
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas       529 Jun  3 05:19 boinc_task_state.xml
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas        95 Jun  3 05:19 pilot_heartbeat.json
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas      1029 Jun  3 05:19 memory_monitor_summary.json
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas    306895 Jun  3 05:19 log.45006595._020063.job.log.tgz.1
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas      7699 Jun  3 05:19 heartbeat.json
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas        27 Jun  3 05:20 wrapper_checkpoint.txt
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas      4426 Jun  3 05:20 pilotlog.txt
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 05:20 boinc_mmap_file
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas    502146 Jun  3 05:20 log.45006595._020063.job.log.1
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas       357 Jun  3 05:20 output.list
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas       620 Jun  3 05:20 runtime_log
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas    829440 Jun  3 05:20 result.tar.gz
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 05:20 runtime_log.err
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas       651 Jun  3 05:20 PzcNDmguYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm53hKDm9iP8Lo.diag
[2025-06-03 05:20:09] -rw-r--r--. 1 boincer umatlas     21164 Jun  3 05:20 stderr.txt
[2025-06-03 05:20:09] HITS file was successfully produced:
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas 177887967 Jun  3 05:19 shared/HITS.pool.root.1
[2025-06-03 05:20:09]  *** Contents of shared directory: ***
[2025-06-03 05:20:09] total 384760
[2025-06-03 05:20:09] -rw-r--r--. 2 boincer umatlas 214740233 Jun  3 03:51 ATLAS.root_0
[2025-06-03 05:20:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:51 start_atlas.sh
[2025-06-03 05:20:09] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 03:51 input.tar.gz
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas 177887967 Jun  3 05:19 HITS.pool.root.1
[2025-06-03 05:20:09] -rw-------. 1 boincer umatlas    829440 Jun  3 05:20 result.tar.gz
05:20:10 (329772): run_atlas exited; CPU time 26104.152229
05:20:10 (329772): called boinc_finish(0)

</stderr_txt>
]]>

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