Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:37:56 (27800): wrapper (7.7.26015): starting
18:37:56 (27800): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:37:56] Arguments: --nthreads 8
[2025-06-03 18:37:56] Threads: 8
[2025-06-03 18:37:56] Checking for CVMFS
[2025-06-03 18:37:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:37:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:37:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:37:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:37:58] 2.11.2.0 27863 32199 95764 146749 0 108 18124006 25165824 4099 130560 0 15410594 99.766 18587064 4889 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 18:37:58] CVMFS is ok
[2025-06-03 18:37:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:37:58] Checking for apptainer binary...
[2025-06-03 18:37:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:37:58] Running /usr/bin/apptainer --version
[2025-06-03 18:37:58] apptainer version 1.3.2-1.el7
[2025-06-03 18:37:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:37:59] cg-vwn495.simple-grid.lan
[2025-06-03 18:37:59] apptainer works
[2025-06-03 18:37:59] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:37:59] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:37:59] Starting ATLAS job with PandaID=6677469048
[2025-06-03 18:37:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:34:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:34:19] 2025-06-03 19:57:55,809 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677469048/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:34:19] 2025-06-03 19:57:55,810 | INFO     | extracted standard info from prmon json
[2025-06-04 00:34:19] 2025-06-03 19:57:55,810 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:34:19] 2025-06-03 19:57:55,810 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:34:19] 2025-06-03 19:57:55,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:34:19] 2025-06-03 19:57:55,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:34:19] 2025-06-03 19:57:55,814 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:34:19] 2025-06-03 19:57:55,815 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 00:34:19] 2025-06-03 19:57:55,816 | INFO     | sum of deviations: -41353791274.5
[2025-06-04 00:34:19] 2025-06-03 19:57:55,816 | INFO     | mean x: 1748974641.5
[2025-06-04 00:34:19] 2025-06-03 19:57:55,816 | INFO     | mean y: 2539848.974226804
[2025-06-04 00:34:19] 2025-06-03 19:57:55,816 | INFO     | -- intersect: 31949296219.15289
[2025-06-04 00:34:19] 2025-06-03 19:57:55,816 | INFO     | intersect: 31949296219.15289
[2025-06-04 00:34:19] 2025-06-03 19:57:55,817 | INFO     | chi2: 2.5363488931584603
[2025-06-04 00:34:19] 2025-06-03 19:57:55,817 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,818 | INFO     | sum of deviations: -26724466305.000004
[2025-06-04 00:34:19] 2025-06-03 19:57:55,819 | INFO     | mean x: 1748974489.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,819 | INFO     | mean y: 2552689.111111111
[2025-06-04 00:34:19] 2025-06-03 19:57:55,819 | INFO     | -- intersect: 22330090701.177277
[2025-06-04 00:34:19] 2025-06-03 19:57:55,819 | INFO     | intersect: 22330090701.177277
[2025-06-04 00:34:19] 2025-06-03 19:57:55,819 | INFO     | chi2: 1.7659714165841898
[2025-06-04 00:34:19] 2025-06-03 19:57:55,819 | INFO     | current chi2=1.7659714165841898 (change=30.37348208096624 %)
[2025-06-04 00:34:19] 2025-06-03 19:57:55,820 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,821 | INFO     | sum of deviations: -25155956804.499996
[2025-06-04 00:34:19] 2025-06-03 19:57:55,821 | INFO     | mean x: 1748974336.5
[2025-06-04 00:34:19] 2025-06-03 19:57:55,821 | INFO     | mean y: 2554167.8967391304
[2025-06-04 00:34:19] 2025-06-03 19:57:55,821 | INFO     | -- intersect: 22780009945.757336
[2025-06-04 00:34:19] 2025-06-03 19:57:55,821 | INFO     | intersect: 22780009945.757336
[2025-06-04 00:34:19] 2025-06-03 19:57:55,830 | INFO     | chi2: 1.7645329777093535
[2025-06-04 00:34:19] 2025-06-03 19:57:55,830 | INFO     | current chi2=1.7645329777093535 (change=0.08145312326847197 %)
[2025-06-04 00:34:19] 2025-06-03 19:57:55,830 | INFO     | right removable region: 183
[2025-06-04 00:34:19] 2025-06-03 19:57:55,830 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,832 | INFO     | sum of deviations: -72453035480.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,832 | INFO     | mean x: 1748974794.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,832 | INFO     | mean y: 2567345.26984127
[2025-06-04 00:34:19] 2025-06-03 19:57:55,832 | INFO     | -- intersect: 60535045989.1396
[2025-06-04 00:34:19] 2025-06-03 19:57:55,832 | INFO     | intersect: 60535045989.1396
[2025-06-04 00:34:19] 2025-06-03 19:57:55,832 | INFO     | chi2: 0.9904503468649437
[2025-06-04 00:34:19] 2025-06-03 19:57:55,832 | INFO     | current chi2=0.9904503468649437 (change=60.949759335689926 %)
[2025-06-04 00:34:19] 2025-06-03 19:57:55,833 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,834 | INFO     | sum of deviations: -70289796994.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,834 | INFO     | mean x: 1748974946.5
[2025-06-04 00:34:19] 2025-06-03 19:57:55,834 | INFO     | mean y: 2565270.3586956523
[2025-06-04 00:34:19] 2025-06-03 19:57:55,834 | INFO     | -- intersect: 63646469316.866455
[2025-06-04 00:34:19] 2025-06-03 19:57:55,834 | INFO     | intersect: 63646469316.866455
[2025-06-04 00:34:19] 2025-06-03 19:57:55,835 | INFO     | chi2: 0.9759546401579654
[2025-06-04 00:34:19] 2025-06-03 19:57:55,835 | INFO     | current chi2=0.9759546401579654 (change=1.4635470372504114 %)
[2025-06-04 00:34:19] 2025-06-03 19:57:55,835 | INFO     | left removable region: 20
[2025-06-04 00:34:19] 2025-06-03 19:57:55,835 | INFO     | sum of square deviations: 1342841922.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,836 | INFO     | sum of deviations: -44986347465.99999
[2025-06-04 00:34:19] 2025-06-03 19:57:55,836 | INFO     | mean x: 1748974916.0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,836 | INFO     | mean y: 2572995.8527607364
[2025-06-04 00:34:19] 2025-06-03 19:57:55,836 | INFO     | -- intersect: 58594721476.97097
[2025-06-04 00:34:19] 2025-06-03 19:57:55,836 | INFO     | intersect: 58594721476.97097
[2025-06-04 00:34:19] 2025-06-03 19:57:55,837 | INFO     | chi2: 0.1679713389624934
[2025-06-04 00:34:19] 2025-06-03 19:57:55,837 | INFO     | -- intersect: 58594721476.97097
[2025-06-04 00:34:19] 2025-06-03 19:57:55,837 | INFO     | current memory leak: -33.50 B/s (using 163 data points, chi2=0.17)
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | ..............................
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | . Timing measurements:
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | . get job = 0 s
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | . initial setup = 2 s
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | . payload setup = 20 s
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | . stage-in = 0 s
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | . payload execution = 11842 s
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | . stage-out = 3 s
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | . log creation = 1 s
[2025-06-04 00:34:19] 2025-06-03 19:57:55,838 | INFO     | ..............................
[2025-06-04 00:34:19] 2025-06-03 19:57:55,953 | INFO     | 
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | job summary report
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | --------------------------------------------------
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | PanDA job id: 6677469048
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | task id: 45006595
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | errors: (none)
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | pilot state: finished 
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | transexitcode: 0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | exeerrorcode: 0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,954 | INFO     | exeerrordiag: 
[2025-06-04 00:34:19] 2025-06-03 19:57:55,955 | INFO     | exitcode: 0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,955 | INFO     | exitmsg: OK
[2025-06-04 00:34:19] 2025-06-03 19:57:55,955 | INFO     | cpuconsumptiontime: 43952 s
[2025-06-04 00:34:19] 2025-06-03 19:57:55,955 | INFO     | nevents: 400
[2025-06-04 00:34:19] 2025-06-03 19:57:55,955 | INFO     | neventsw: 0
[2025-06-04 00:34:19] 2025-06-03 19:57:55,955 | INFO     | pid: 11607
[2025-06-04 00:34:19] 2025-06-03 19:57:55,955 | INFO     | pgrp: 11607
[2025-06-04 00:34:19] 2025-06-03 19:57:55,955 | INFO     | corecount: 8
[2025-06-04 00:34:19] 2025-06-03 19:57:55,955 | INFO     | event service: False
[2025-06-04 00:34:19] 2025-06-03 19:57:55,956 | INFO     | sizes: {0: 2405012, 1: 2405211, 9: 2405417, 11: 2405445, 11867: 2434456, 11871: 2443399, 11872: 2443583, 11960: 2443753}
[2025-06-04 00:34:19] 2025-06-03 19:57:55,956 | INFO     | --------------------------------------------------
[2025-06-04 00:34:19] 2025-06-03 19:57:55,956 | INFO     | 
[2025-06-04 00:34:19] 2025-06-03 19:57:55,956 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 00:34:19] 2025-06-03 19:57:56,379 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,379 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,381 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:34:19] 2025-06-03 19:57:56,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:34:19] 2025-06-03 19:57:56,381 | INFO     | job 6677469048 has completed (purged errors)
[2025-06-04 00:34:19] 2025-06-03 19:57:56,381 | INFO     | overall cleanup function is called
[2025-06-04 00:34:19] 2025-06-03 19:57:57,389 | INFO     | --- collectZombieJob: --- 10, [11607]
[2025-06-04 00:34:19] 2025-06-03 19:57:57,390 | INFO     | zombie collector waiting for pid 11607
[2025-06-04 00:34:19] 2025-06-03 19:57:57,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:34:19] 2025-06-03 19:57:57,390 | INFO     | collected zombie processes
[2025-06-04 00:34:19] 2025-06-03 19:57:57,390 | INFO     | will attempt to kill all subprocesses of pid=11607
[2025-06-04 00:34:19] 2025-06-03 19:57:57,519 | INFO     | process IDs to be killed: [11607] (in reverse order)
[2025-06-04 00:34:19] 2025-06-03 19:57:58,032 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:34:19] 2025-06-03 19:57:58,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:34:19] 2025-06-03 19:57:58,036 | INFO     | did not find any defunct processes belonging to 11607
[2025-06-04 00:34:19] 2025-06-03 19:57:58,039 | INFO     | did not find any defunct processes belonging to 11607
[2025-06-04 00:34:19] 2025-06-03 19:57:58,039 | INFO     | ready for new job
[2025-06-04 00:34:19] 2025-06-03 19:57:58,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:34:19] 2025-06-03 19:57:58,041 | INFO     | **************************************
[2025-06-04 00:34:19] 2025-06-03 19:57:58,041 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:34:19] 2025-06-03 19:57:58,041 | INFO     | **************************************
[2025-06-04 00:34:19] 2025-06-03 19:57:58,041 | INFO     | 
[2025-06-04 00:34:19] 2025-06-03 19:57:58,042 | INFO     | pilot is running in a VM
[2025-06-04 00:34:19] 2025-06-03 19:57:58,042 | INFO     | architecture information:
[2025-06-04 00:34:19] 2025-06-03 19:57:58,044 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:34:19] 2025-06-03 19:57:58,188 | INFO     | cat /etc/os-release:
[2025-06-04 00:34:19] NAME="CentOS Linux"
[2025-06-04 00:34:19] VERSION="7 (Core)"
[2025-06-04 00:34:19] ID="centos"
[2025-06-04 00:34:19] ID_LIKE="rhel fedora"
[2025-06-04 00:34:19] VERSION_ID="7"
[2025-06-04 00:34:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:34:19] ANSI_COLOR="0;31"
[2025-06-04 00:34:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:34:19] HOME_URL="https://www.centos.org/"
[2025-06-04 00:34:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:34:19] 
[2025-06-04 00:34:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:34:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:34:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:34:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:34:19] 
[2025-06-04 00:34:19] 2025-06-03 19:57:58,188 | INFO     | **************************************
[2025-06-04 00:34:19] 2025-06-03 19:57:58,692 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 00:34:19] 2025-06-03 19:57:58,914 | INFO     | sufficient remaining disk space (497042849792 B)
[2025-06-04 00:34:19] 2025-06-03 19:57:58,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:34:19] 2025-06-03 19:57:58,915 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:34:19] 2025-06-03 19:57:58,915 | INFO     | update_server=False
[2025-06-04 00:34:19] 2025-06-03 19:57:58,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:34:19] 2025-06-03 19:57:58,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:34:19] 2025-06-03 19:57:58,916 | INFO     | aborting loop
[2025-06-04 00:34:19] 2025-06-03 19:57:59,105 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:34:19] 2025-06-03 19:57:59,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:34:19] 2025-06-03 19:57:59,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:34:19] 2025-06-03 19:57:59,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:34:19] 2025-06-03 19:57:59,480 | INFO     | all payload control threads have been joined
[2025-06-04 00:34:19] 2025-06-03 19:57:59,509 | INFO     | all data control threads have been joined
[2025-06-04 00:34:19] 2025-06-03 19:57:59,921 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:57:59,922 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:57:59,933 | INFO     | all job control threads have been joined
[2025-06-04 00:34:19] 2025-06-03 19:57:59,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:34:19] 2025-06-03 19:58:00,015 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:00,340 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:00,487 | INFO     | [payload] control thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:00,516 | INFO     | [data] control thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:00,663 | INFO     | [job] validate thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:00,684 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:00,795 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:00,940 | INFO     | [job] control thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:00,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:34:19] 2025-06-03 19:58:01,186 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:01,381 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:01,381 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:01,958 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:01,976 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:03,284 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:34:19] 2025-06-03 19:58:03,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144787978048)>', '<ExcThread(monitor, started 140143952381696)>']
[2025-06-04 00:34:19] 2025-06-03 19:58:04,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:34:19] 2025-06-03 19:58:04,135 | INFO     | [monitor] control thread has ended
[2025-06-04 00:34:19] 2025-06-03 19:58:08,776 | INFO     | all workflow threads have been joined
[2025-06-04 00:34:19] 2025-06-03 19:58:08,777 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:34:19] 2025-06-03 19:58:08,777 | INFO     | traces error code: 0
[2025-06-04 00:34:19] 2025-06-03 19:58:08,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:34:19] 2025-06-03 19:58:09,173 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:34:19] 2025-06-03 19:58:09,297 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:34:19] 2025-06-03 19:58:09,424 [wrapper] pilotpid: 31511
[2025-06-04 00:34:19] 2025-06-03 19:58:09,514 [wrapper] Pilot exit status: 0
[2025-06-04 00:34:19] 2025-06-03 19:58:09,989 [wrapper] pandaids: 6677469048
[2025-06-04 00:34:19] 2025-06-03 19:58:10,886 [wrapper] cleanup supervisor_pilot 17100 31512
[2025-06-04 00:34:19] 2025-06-03 19:58:10,957 [wrapper] Test setup, not cleaning
[2025-06-04 00:34:19] 2025-06-03 19:58:11,017 [wrapper] apfmon messages muted
[2025-06-04 00:34:19] 2025-06-03 19:58:11,079 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:34:19] 2025-06-03 19:58:11,171 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:34:19]  *** Error codes and diagnostics ***
[2025-06-04 00:34:19]     "exeErrorCode": 0,
[2025-06-04 00:34:19]     "exeErrorDiag": "",
[2025-06-04 00:34:19]     "pilotErrorCode": 0,
[2025-06-04 00:34:19]     "pilotErrorDiag": "",
[2025-06-04 00:34:19]  *** Listing of results directory ***
[2025-06-04 00:34:19] total 387812
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc    495897 Jun  3 06:37 pilot3.tar.gz
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc      5111 Jun  3 06:49 queuedata.json
[2025-06-04 00:34:19] -rwx------. 1 boinc boinc     37140 Jun  3 06:50 runpilot2-wrapper.sh
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc       100 Jun  3 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:34:19] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 18:37 run_atlas
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc       105 Jun  3 18:37 job.xml
[2025-06-04 00:34:19] -rw-r--r--. 2 boinc boinc 217515665 Jun  3 18:37 EVNT.45006593._000794.pool.root.1
[2025-06-04 00:34:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:37 start_atlas.sh
[2025-06-04 00:34:19] drwxrwx--x. 2 boinc boinc        68 Jun  3 18:37 shared
[2025-06-04 00:34:19] -rw-r--r--. 2 boinc boinc    508877 Jun  3 18:37 input.tar.gz
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc      6392 Jun  3 18:37 init_data.xml
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc         0 Jun  3 18:37 boinc_lockfile
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc      2524 Jun  3 18:37 pandaJob.out
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc    983734 Jun  3 18:38 agis_schedconf.cvmfs.json
[2025-06-04 00:34:19] drwx------. 4 boinc boinc      4096 Jun  3 18:38 pilot3
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc 172950631 Jun  3 21:55 HITS.45006595._019840.pool.root.1
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:55 boinc_task_state.xml
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc      1020 Jun  3 21:56 memory_monitor_summary.json
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc   1603667 Jun  3 21:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc    366467 Jun  3 21:56 log.45006595._019840.job.log.tgz.1
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc        95 Jun  3 21:57 pilot_heartbeat.json
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc      7694 Jun  3 21:57 heartbeat.json
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc      4417 Jun  3 21:58 pilotlog.txt
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc   1049072 Jun  3 21:58 log.45006595._019840.job.log.1
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc       357 Jun  3 21:58 output.list
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:58 runtime_log
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc   1433600 Jun  3 21:58 result.tar.gz
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc      8673 Jun  3 21:58 runtime_log.err
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc       656 Jun  3 21:58 QWUKDmOmYg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnOXKDm1CKYTm.diag
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc      8192 Jun  4 00:34 boinc_mmap_file
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc        28 Jun  4 00:34 wrapper_checkpoint.txt
[2025-06-04 00:34:19] -rw-r--r--. 1 boinc boinc     20488 Jun  4 00:34 stderr.txt
[2025-06-04 00:34:19] HITS file was successfully produced:
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc 172950631 Jun  3 21:55 shared/HITS.pool.root.1
[2025-06-04 00:34:19]  *** Contents of shared directory: ***
[2025-06-04 00:34:19] total 383236
[2025-06-04 00:34:19] -rw-r--r--. 2 boinc boinc 217515665 Jun  3 18:37 ATLAS.root_0
[2025-06-04 00:34:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:37 start_atlas.sh
[2025-06-04 00:34:19] -rw-r--r--. 2 boinc boinc    508877 Jun  3 18:37 input.tar.gz
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc 172950631 Jun  3 21:55 HITS.pool.root.1
[2025-06-04 00:34:19] -rw-------. 1 boinc boinc   1433600 Jun  3 21:58 result.tar.gz
00:34:21 (27800): run_atlas exited; CPU time 44089.858966
00:34:21 (27800): called boinc_finish(0)

</stderr_txt>
]]>

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