Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
18:41:28 (321480): wrapper (7.7.26015): starting
18:41:28 (321480): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 18:41:28] Arguments: --nthreads 4
[2025-06-03 18:41:28] Threads: 4
[2025-06-03 18:41:28] Checking for CVMFS
[2025-06-03 18:41:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:41:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:41:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:41:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:41:28] 2.12.7.0 5156 1596 58652 146752 2 55 2479831 4096000 0 130560 0 878759 99.986 391301 1525 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-03 18:41:28] CVMFS is ok
[2025-06-03 18:41:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:41:28] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-03 18:41:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-03 18:41:28] Further information can be found at the LHC@home message board.
[2025-06-03 18:41:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:41:28] Checking for apptainer binary...
[2025-06-03 18:41:28] apptainer is not installed, using version from CVMFS
[2025-06-03 18:41:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:41:28] localhost
[2025-06-03 18:41:28] apptainer works
[2025-06-03 18:41:28] Set ATHENA_PROC_NUMBER=4
[2025-06-03 18:41:28] Set ATHENA_CORE_NUMBER=4
[2025-06-03 18:41:28] Starting ATLAS job with PandaID=6677495245
[2025-06-03 18:41:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:11:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:11:01] 2025-06-03 21:10:44,539 | INFO     | monitor loop #677: job 0:6677495245 is in state 'finished'
[2025-06-03 21:11:01] 2025-06-03 21:10:44,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:11:01] 2025-06-03 21:10:47,042 | INFO     | monitor loop #678: job 0:6677495245 is in state 'finished'
[2025-06-03 21:11:01] 2025-06-03 21:10:47,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,544 | INFO     | monitor loop #679: job 0:6677495245 is in state 'finished'
[2025-06-03 21:11:01] 2025-06-03 21:10:49,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,726 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:11:01] 2025-06-03 21:10:49,727 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6677495245/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,727 | INFO     | extracted standard info from prmon json
[2025-06-03 21:11:01] 2025-06-03 21:10:49,727 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:11:01] 2025-06-03 21:10:49,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:11:01] 2025-06-03 21:10:49,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:11:01] 2025-06-03 21:10:49,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:11:01] 2025-06-03 21:10:49,729 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:11:01] 2025-06-03 21:10:49,730 | INFO     | sum of square deviations: 984941258.0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,730 | INFO     | sum of deviations: -28947582086.000008
[2025-06-03 21:11:01] 2025-06-03 21:10:49,730 | INFO     | mean x: 1748980571.0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,730 | INFO     | mean y: 2595513.619047619
[2025-06-03 21:11:01] 2025-06-03 21:10:49,730 | INFO     | -- intersect: 51405415970.79768
[2025-06-03 21:11:01] 2025-06-03 21:10:49,730 | INFO     | intersect: 51405415970.79768
[2025-06-03 21:11:01] 2025-06-03 21:10:49,731 | INFO     | chi2: 3.0725116638455754
[2025-06-03 21:11:01] 2025-06-03 21:10:49,731 | INFO     | sum of square deviations: 887813855.5
[2025-06-03 21:11:01] 2025-06-03 21:10:49,731 | INFO     | sum of deviations: -14894616684.0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,731 | INFO     | mean x: 1748980418.5
[2025-06-03 21:11:01] 2025-06-03 21:10:49,731 | INFO     | mean y: 2617216.1408450706
[2025-06-03 21:11:01] 2025-06-03 21:10:49,732 | INFO     | -- intersect: 29344796052.38835
[2025-06-03 21:11:01] 2025-06-03 21:10:49,732 | INFO     | intersect: 29344796052.38835
[2025-06-03 21:11:01] 2025-06-03 21:10:49,732 | INFO     | chi2: 2.401137454031407
[2025-06-03 21:11:01] 2025-06-03 21:10:49,732 | INFO     | current chi2=2.401137454031407 (change=21.85098978514119 %)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,732 | INFO     | right removable region: 141
[2025-06-03 21:11:01] 2025-06-03 21:10:49,732 | INFO     | sum of square deviations: 887813855.5
[2025-06-03 21:11:01] 2025-06-03 21:10:49,733 | INFO     | sum of deviations: -59598940776.0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,733 | INFO     | mean x: 1748980723.5
[2025-06-03 21:11:01] 2025-06-03 21:10:49,733 | INFO     | mean y: 2643200.8450704226
[2025-06-03 21:11:01] 2025-06-03 21:10:49,733 | INFO     | -- intersect: 117411712582.32887
[2025-06-03 21:11:01] 2025-06-03 21:10:49,733 | INFO     | intersect: 117411712582.32887
[2025-06-03 21:11:01] 2025-06-03 21:10:49,733 | INFO     | chi2: 1.020236551414453
[2025-06-03 21:11:01] 2025-06-03 21:10:49,733 | INFO     | current chi2=1.020236551414453 (change=66.79470534092235 %)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,733 | INFO     | sum of square deviations: 797291228.0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,734 | INFO     | sum of deviations: -58302182890.00001
[2025-06-03 21:11:01] 2025-06-03 21:10:49,734 | INFO     | mean x: 1748980876.0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,734 | INFO     | mean y: 2640978.613138686
[2025-06-03 21:11:01] 2025-06-03 21:10:49,734 | INFO     | -- intersect: 127897441927.88988
[2025-06-03 21:11:01] 2025-06-03 21:10:49,734 | INFO     | intersect: 127897441927.88988
[2025-06-03 21:11:01] 2025-06-03 21:10:49,734 | INFO     | chi2: 0.9857287204187664
[2025-06-03 21:11:01] 2025-06-03 21:10:49,734 | INFO     | current chi2=0.9857287204187664 (change=3.3823362775863104 %)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,734 | INFO     | left removable region: 20
[2025-06-03 21:11:01] 2025-06-03 21:10:49,734 | INFO     | sum of square deviations: 549294020.0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,735 | INFO     | sum of deviations: -39194516599.0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,735 | INFO     | mean x: 1748980998.0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,735 | INFO     | mean y: 2660444.619834711
[2025-06-03 21:11:01] 2025-06-03 21:10:49,735 | INFO     | -- intersect: 124800059035.35379
[2025-06-03 21:11:01] 2025-06-03 21:10:49,735 | INFO     | intersect: 124800059035.35379
[2025-06-03 21:11:01] 2025-06-03 21:10:49,735 | INFO     | chi2: 0.2681808255431439
[2025-06-03 21:11:01] 2025-06-03 21:10:49,735 | INFO     | -- intersect: 124800059035.35379
[2025-06-03 21:11:01] 2025-06-03 21:10:49,735 | INFO     | current memory leak: -71.35 B/s (using 121 data points, chi2=0.27)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,735 | INFO     | ..............................
[2025-06-03 21:11:01] 2025-06-03 21:10:49,736 | INFO     | . Timing measurements:
[2025-06-03 21:11:01] 2025-06-03 21:10:49,736 | INFO     | . get job = 0 s
[2025-06-03 21:11:01] 2025-06-03 21:10:49,736 | INFO     | . initial setup = 3 s
[2025-06-03 21:11:01] 2025-06-03 21:10:49,736 | INFO     | . payload setup = 4 s
[2025-06-03 21:11:01] 2025-06-03 21:10:49,736 | INFO     | . stage-in = 0 s
[2025-06-03 21:11:01] 2025-06-03 21:10:49,736 | INFO     | . payload execution = 8919 s
[2025-06-03 21:11:01] 2025-06-03 21:10:49,736 | INFO     | . stage-out = 0 s
[2025-06-03 21:11:01] 2025-06-03 21:10:49,736 | INFO     | . log creation = 0 s
[2025-06-03 21:11:01] 2025-06-03 21:10:49,736 | INFO     | ..............................
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | 
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | job summary report
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | --------------------------------------------------
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | PanDA job id: 6677495245
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | task id: 45006595
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | errors: (none)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | pilot state: finished 
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | transexitcode: 0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | exeerrorcode: 0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | exeerrordiag: 
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | exitcode: 0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | exitmsg: OK
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | cpuconsumptiontime: 34226 s
[2025-06-03 21:11:01] 2025-06-03 21:10:49,799 | INFO     | nevents: 400
[2025-06-03 21:11:01] 2025-06-03 21:10:49,800 | INFO     | neventsw: 0
[2025-06-03 21:11:01] 2025-06-03 21:10:49,800 | INFO     | pid: 331483
[2025-06-03 21:11:01] 2025-06-03 21:10:49,800 | INFO     | pgrp: 331483
[2025-06-03 21:11:01] 2025-06-03 21:10:49,800 | INFO     | corecount: 4
[2025-06-03 21:11:01] 2025-06-03 21:10:49,800 | INFO     | event service: False
[2025-06-03 21:11:01] 2025-06-03 21:10:49,800 | INFO     | sizes: {0: 2405068, 1: 2405210, 3: 2405416, 11: 2405444, 8926: 2433562, 8928: 2442503, 8930: 2442687, 8939: 2442857}
[2025-06-03 21:11:01] 2025-06-03 21:10:49,800 | INFO     | --------------------------------------------------
[2025-06-03 21:11:01] 2025-06-03 21:10:49,800 | INFO     | 
[2025-06-03 21:11:01] 2025-06-03 21:10:49,800 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-03 21:11:01] 2025-06-03 21:10:49,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,814 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:11:01] 2025-06-03 21:10:49,815 | INFO     | job 6677495245 has completed (purged errors)
[2025-06-03 21:11:01] 2025-06-03 21:10:49,816 | INFO     | overall cleanup function is called
[2025-06-03 21:11:01] 2025-06-03 21:10:50,824 | INFO     | --- collectZombieJob: --- 10, [331483]
[2025-06-03 21:11:01] 2025-06-03 21:10:50,824 | INFO     | zombie collector waiting for pid 331483
[2025-06-03 21:11:01] 2025-06-03 21:10:50,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:11:01] 2025-06-03 21:10:50,824 | INFO     | collected zombie processes
[2025-06-03 21:11:01] 2025-06-03 21:10:50,824 | INFO     | will attempt to kill all subprocesses of pid=331483
[2025-06-03 21:11:01] 2025-06-03 21:10:50,856 | INFO     | process IDs to be killed: [331483] (in reverse order)
[2025-06-03 21:11:01] 2025-06-03 21:10:50,882 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:11:01] 2025-06-03 21:10:50,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:11:01] 2025-06-03 21:10:50,883 | INFO     | did not find any defunct processes belonging to 331483
[2025-06-03 21:11:01] 2025-06-03 21:10:50,884 | INFO     | did not find any defunct processes belonging to 331483
[2025-06-03 21:11:01] 2025-06-03 21:10:50,884 | INFO     | ready for new job
[2025-06-03 21:11:01] 2025-06-03 21:10:50,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:11:01] 2025-06-03 21:10:50,886 | INFO     | **************************************
[2025-06-03 21:11:01] 2025-06-03 21:10:50,886 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:11:01] 2025-06-03 21:10:50,886 | INFO     | **************************************
[2025-06-03 21:11:01] 2025-06-03 21:10:50,886 | INFO     | 
[2025-06-03 21:11:01] 2025-06-03 21:10:50,886 | INFO     | pilot is running in a VM
[2025-06-03 21:11:01] 2025-06-03 21:10:50,886 | INFO     | architecture information:
[2025-06-03 21:11:01] 2025-06-03 21:10:50,886 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:11:01] 2025-06-03 21:10:50,896 | INFO     | cat /etc/os-release:
[2025-06-03 21:11:01] NAME="CentOS Linux"
[2025-06-03 21:11:01] VERSION="7 (Core)"
[2025-06-03 21:11:01] ID="centos"
[2025-06-03 21:11:01] ID_LIKE="rhel fedora"
[2025-06-03 21:11:01] VERSION_ID="7"
[2025-06-03 21:11:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:11:01] ANSI_COLOR="0;31"
[2025-06-03 21:11:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:11:01] HOME_URL="https://www.centos.org/"
[2025-06-03 21:11:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:11:01] 
[2025-06-03 21:11:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:11:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:11:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:11:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:11:01] 
[2025-06-03 21:11:01] 2025-06-03 21:10:50,896 | INFO     | **************************************
[2025-06-03 21:11:01] 2025-06-03 21:10:51,399 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-03 21:11:01] 2025-06-03 21:10:51,414 | INFO     | sufficient remaining disk space (151105044480 B)
[2025-06-03 21:11:01] 2025-06-03 21:10:51,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:11:01] 2025-06-03 21:10:51,414 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:11:01] 2025-06-03 21:10:51,414 | INFO     | update_server=False
[2025-06-03 21:11:01] 2025-06-03 21:10:51,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:11:01] 2025-06-03 21:10:51,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:11:01] 2025-06-03 21:10:51,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:11:01] 2025-06-03 21:10:51,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:11:01] 2025-06-03 21:10:51,415 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:11:01] 2025-06-03 21:10:51,415 | INFO     | aborting loop
[2025-06-03 21:11:01] 2025-06-03 21:10:51,415 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:11:01] 2025-06-03 21:10:51,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:11:01] 2025-06-03 21:10:51,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:11:01] 2025-06-03 21:10:51,608 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:11:01] 2025-06-03 21:10:51,713 | INFO     | all data control threads have been joined
[2025-06-03 21:11:01] 2025-06-03 21:10:52,110 | INFO     | all job control threads have been joined
[2025-06-03 21:11:01] 2025-06-03 21:10:52,420 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:52,420 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:52,420 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:52,465 | INFO     | all payload control threads have been joined
[2025-06-03 21:11:01] 2025-06-03 21:10:52,559 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:52,652 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:52,719 | INFO     | [data] control thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:53,116 | INFO     | [job] control thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:53,156 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:53,373 | INFO     | [job] validate thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:53,385 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:53,470 | INFO     | [payload] control thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:53,525 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:53,592 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:53,613 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:53,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:55,421 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:11:01] 2025-06-03 21:10:56,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712904484672)>', '<ExcThread(monitor, started 140712070846208)>']
[2025-06-03 21:11:01] 2025-06-03 21:10:56,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:11:01] 2025-06-03 21:10:56,440 | INFO     | [monitor] control thread has ended
[2025-06-03 21:11:01] 2025-06-03 21:11:01,342 | INFO     | all workflow threads have been joined
[2025-06-03 21:11:01] 2025-06-03 21:11:01,342 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:11:01] 2025-06-03 21:11:01,343 | INFO     | traces error code: 0
[2025-06-03 21:11:01] 2025-06-03 21:11:01,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:11:01] 2025-06-03 21:11:01,413 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:11:01] 2025-06-03 21:11:01,415 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:11:01] 2025-06-03 21:11:01,417 [wrapper] pilotpid: 325064
[2025-06-03 21:11:01] 2025-06-03 21:11:01,418 [wrapper] Pilot exit status: 0
[2025-06-03 21:11:01] 2025-06-03 21:11:01,426 [wrapper] pandaids: 6677495245
[2025-06-03 21:11:01] 2025-06-03 21:11:01,442 [wrapper] cleanup supervisor_pilot  347663 325065
[2025-06-03 21:11:01] 2025-06-03 21:11:01,444 [wrapper] Test setup, not cleaning
[2025-06-03 21:11:01] 2025-06-03 21:11:01,446 [wrapper] apfmon messages muted
[2025-06-03 21:11:01] 2025-06-03 21:11:01,448 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:11:01] 2025-06-03 21:11:01,450 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:11:01]  *** Error codes and diagnostics ***
[2025-06-03 21:11:01]     "exeErrorCode": 0,
[2025-06-03 21:11:01]     "exeErrorDiag": "",
[2025-06-03 21:11:01]     "pilotErrorCode": 0,
[2025-06-03 21:11:01]     "pilotErrorDiag": "",
[2025-06-03 21:11:01]  *** Listing of results directory ***
[2025-06-03 21:11:01] total 397040
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc    495897 Jun  3 06:33 pilot3.tar.gz
[2025-06-03 21:11:01] -rwx------ 1 boinc boinc     37140 Jun  3 06:39 runpilot2-wrapper.sh
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc      5111 Jun  3 06:39 queuedata.json
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc       100 Jun  3 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:11:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 18:41 run_atlas
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc       105 Jun  3 18:41 job.xml
[2025-06-03 21:11:01] -rw-r--r-- 2 boinc boinc     15093 Jun  3 18:41 start_atlas.sh
[2025-06-03 21:11:01] drwxrwx--x 2 boinc boinc      4096 Jun  3 18:41 shared
[2025-06-03 21:11:01] -rw-r--r-- 2 boinc boinc    508874 Jun  3 18:41 input.tar.gz
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc      6440 Jun  3 18:41 init_data.xml
[2025-06-03 21:11:01] -rw-r--r-- 2 boinc boinc 214643399 Jun  3 18:41 EVNT.45006593._000902.pool.root.1
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc         0 Jun  3 18:41 boinc_lockfile
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc      2524 Jun  3 18:41 pandaJob.out
[2025-06-03 21:11:01] -rw------- 1 boinc boinc    986893 Jun  3 18:41 agis_schedconf.cvmfs.json
[2025-06-03 21:11:01] -rw------- 1 boinc boinc   1603667 Jun  3 18:41 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:11:01] drwx------ 4 boinc boinc      4096 Jun  3 18:41 pilot3
[2025-06-03 21:11:01] -rw------- 1 boinc boinc 185854565 Jun  3 21:10 HITS.45006595._022555.pool.root.1
[2025-06-03 21:11:01] -rw------- 1 boinc boinc        95 Jun  3 21:10 pilot_heartbeat.json
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc       529 Jun  3 21:10 boinc_task_state.xml
[2025-06-03 21:11:01] -rw------- 1 boinc boinc      1010 Jun  3 21:10 memory_monitor_summary.json
[2025-06-03 21:11:01] -rw------- 1 boinc boinc    289122 Jun  3 21:10 log.45006595._022555.job.log.tgz.1
[2025-06-03 21:11:01] -rw------- 1 boinc boinc      7634 Jun  3 21:10 heartbeat.json
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc      8192 Jun  3 21:10 boinc_mmap_file
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc        27 Jun  3 21:10 wrapper_checkpoint.txt
[2025-06-03 21:11:01] -rw------- 1 boinc boinc      4539 Jun  3 21:11 pilotlog.txt
[2025-06-03 21:11:01] -rw------- 1 boinc boinc    824676 Jun  3 21:11 log.45006595._022555.job.log.1
[2025-06-03 21:11:01] -rw------- 1 boinc boinc       357 Jun  3 21:11 output.list
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc       620 Jun  3 21:11 runtime_log
[2025-06-03 21:11:01] -rw------- 1 boinc boinc   1136640 Jun  3 21:11 result.tar.gz
[2025-06-03 21:11:01] -rw------- 1 boinc boinc       644 Jun  3 21:11 zsRKDmCUag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmETiKDmYOmpVm.diag
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc      8620 Jun  3 21:11 runtime_log.err
[2025-06-03 21:11:01] -rw-r--r-- 1 boinc boinc     21116 Jun  3 21:11 stderr.txt
[2025-06-03 21:11:01] HITS file was successfully produced:
[2025-06-03 21:11:01] -rw------- 1 boinc boinc 185854565 Jun  3 21:10 shared/HITS.pool.root.1
[2025-06-03 21:11:01]  *** Contents of shared directory: ***
[2025-06-03 21:11:01] total 392752
[2025-06-03 21:11:01] -rw-r--r-- 2 boinc boinc     15093 Jun  3 18:41 start_atlas.sh
[2025-06-03 21:11:01] -rw-r--r-- 2 boinc boinc    508874 Jun  3 18:41 input.tar.gz
[2025-06-03 21:11:01] -rw-r--r-- 2 boinc boinc 214643399 Jun  3 18:41 ATLAS.root_0
[2025-06-03 21:11:01] -rw------- 1 boinc boinc 185854565 Jun  3 21:10 HITS.pool.root.1
[2025-06-03 21:11:01] -rw------- 1 boinc boinc   1136640 Jun  3 21:11 result.tar.gz
21:11:03 (321480): run_atlas exited; CPU time 34244.295600
21:11:03 (321480): called boinc_finish(0)

</stderr_txt>
]]>

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