Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:46:26 (1412477): wrapper (7.7.26015): starting
03:46:26 (1412477): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:46:26] Arguments: --nthreads 8
[2025-06-03 03:46:26] Threads: 8
[2025-06-03 03:46:26] Checking for CVMFS
[2025-06-03 03:46:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:46:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:46:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:46:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:46:26] 2.12.6.0 3036893 21579 428500 146734 0 290 32837729 32935937 9013 16776704 0 106742109 99.639 95999936 24439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 03:46:26] CVMFS is ok
[2025-06-03 03:46:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:46:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:46:26] Further information can be found at the LHC@home message board.
[2025-06-03 03:46:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:46:26] Checking for apptainer binary...
[2025-06-03 03:46:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:46:26] Running /usr/bin/apptainer --version
[2025-06-03 03:46:26] apptainer version 1.4.1-1.el9
[2025-06-03 03:46:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:46:26] c6-12-29-4.aglt2.org
[2025-06-03 03:46:26] apptainer works
[2025-06-03 03:46:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:46:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:46:26] Starting ATLAS job with PandaID=6677469011
[2025-06-03 03:46:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:20:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:20:01]  guid=5c02674b-86ab-4ac6-ac44-4cb63cb4ac95
[2025-06-03 05:20:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 05:20:01]  is_altstaged=None
[2025-06-03 05:20:01]  is_tar=False
[2025-06-03 05:20:01]  lfn=log.45006595._019803.job.log.tgz.1
[2025-06-03 05:20:01]  mtime=0
[2025-06-03 05:20:01]  protocol_id=None
[2025-06-03 05:20:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 05:20:01]  replicas=None
[2025-06-03 05:20:01]  scope=mc23_13p6TeV
[2025-06-03 05:20:01]  status=None
[2025-06-03 05:20:01]  status_code=0
[2025-06-03 05:20:01]  storage_token=
[2025-06-03 05:20:01]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6677469011/log.45006595._019803.job.log.tgz.1
[2025-06-03 05:20:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/61/log.45006595._019803.job.log.tgz.1
[2025-06-03 05:20:01]  workdir=None
[2025-06-03 05:20:01] ]
[2025-06-03 05:20:01] 2025-06-03 09:19:19,725 | INFO     | transferring file log.45006595._019803.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6677469011/log.45006595._019803.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 05:20:01] 2025-06-03 09:19:19,726 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6677469011/log.45006595._019803.job.log.tgz.1 /tmp/boinchome/slots/6/log.45006595._019803.job
[2025-06-03 05:20:01] 2025-06-03 09:19:19,746 | INFO     | adding to output.list: log.45006595._019803.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/61/log.45006595._019803.job.log.tg
[2025-06-03 05:20:01] 2025-06-03 09:19:19,747 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 05:20:01] 2025-06-03 09:19:19,747 | INFO     | summary of transferred files:
[2025-06-03 05:20:01] 2025-06-03 09:19:19,747 | INFO     |  -- lfn=log.45006595._019803.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 05:20:01] 2025-06-03 09:19:19,747 | INFO     | stage-out finished correctly
[2025-06-03 05:20:01] 2025-06-03 09:19:20,680 | INFO     | monitor loop #395: job 0:6677469011 is in state 'finished'
[2025-06-03 05:20:01] 2025-06-03 09:19:20,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:20:01] 2025-06-03 09:19:22,456 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 05:20:01] 2025-06-03 09:19:23,184 | INFO     | monitor loop #396: job 0:6677469011 is in state 'finished'
[2025-06-03 05:20:01] 2025-06-03 09:19:23,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:20:01] 2025-06-03 09:19:24,934 | INFO     | job 6677469011 has state=finished
[2025-06-03 05:20:01] 2025-06-03 09:19:24,935 | INFO     | preparing for final server update for job 6677469011 in state='finished'
[2025-06-03 05:20:01] 2025-06-03 09:19:24,935 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:20:01] 2025-06-03 09:19:24,935 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:20:01] 2025-06-03 09:19:24,936 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:20:01] 2025-06-03 09:19:24,936 | INFO     | job 6677469011 has finished - writing final server update
[2025-06-03 05:20:01] 2025-06-03 09:19:24,936 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:20:01] 2025-06-03 09:19:24,952 | INFO     | executing command: lscpu
[2025-06-03 05:20:01] 2025-06-03 09:19:25,012 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:20:01] 2025-06-03 09:19:25,687 | INFO     | monitor loop #397: job 0:6677469011 is in state 'finished'
[2025-06-03 05:20:01] 2025-06-03 09:19:25,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:20:01] 2025-06-03 09:19:27,635 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 05:20:01] 2025-06-03 09:19:27,636 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6677469011/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:20:01] 2025-06-03 09:19:27,637 | INFO     | extracted standard info from prmon json
[2025-06-03 05:20:01] 2025-06-03 09:19:27,637 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:20:01] 2025-06-03 09:19:27,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:20:01] 2025-06-03 09:19:27,637 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:20:01] 2025-06-03 09:19:27,637 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:20:01] 2025-06-03 09:19:27,639 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:20:01] 2025-06-03 09:19:27,640 | INFO     | sum of square deviations: 183761585.0
[2025-06-03 05:20:01] 2025-06-03 09:19:27,640 | INFO     | sum of deviations: 14525522398.0
[2025-06-03 05:20:01] 2025-06-03 09:19:27,640 | INFO     | mean x: 1748939654.5
[2025-06-03 05:20:01] 2025-06-03 09:19:27,640 | INFO     | mean y: 2108820.9285714286
[2025-06-03 05:20:01] 2025-06-03 09:19:27,641 | INFO     | -- intersect: -138243662863.01797
[2025-06-03 05:20:01] 2025-06-03 09:19:27,641 | INFO     | intersect: -138243662863.01797
[2025-06-03 05:20:01] 2025-06-03 09:19:27,641 | INFO     | chi2: 1.1417766461599863
[2025-06-03 05:20:01] 2025-06-03 09:19:27,641 | INFO     | -- intersect: -138243662863.01797
[2025-06-03 05:20:01] 2025-06-03 09:19:27,641 | INFO     | current memory leak: 79.05 B/s (using 84 data points, chi2=1.14)
[2025-06-03 05:20:01] 2025-06-03 09:19:27,641 | INFO     | ..............................
[2025-06-03 05:20:01] 2025-06-03 09:19:27,642 | INFO     | . Timing measurements:
[2025-06-03 05:20:01] 2025-06-03 09:19:27,642 | INFO     | . get job = 0 s
[2025-06-03 05:20:01] 2025-06-03 09:19:27,642 | INFO     | . initial setup = 2 s
[2025-06-03 05:20:01] 2025-06-03 09:19:27,642 | INFO     | . payload setup = 5 s
[2025-06-03 05:20:01] 2025-06-03 09:19:27,642 | INFO     | . stage-in = 0 s
[2025-06-03 05:20:01] 2025-06-03 09:19:27,642 | INFO     | . payload execution = 5540 s
[2025-06-03 05:20:01] 2025-06-03 09:19:27,642 | INFO     | . stage-out = 0 s
[2025-06-03 05:20:01] 2025-06-03 09:19:27,642 | INFO     | . log creation = 0 s
[2025-06-03 05:20:01] 2025-06-03 09:19:27,642 | INFO     | ..............................
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | 
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | job summary report
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | --------------------------------------------------
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | PanDA job id: 6677469011
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | task id: 45006595
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | errors: (none)
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | pilot state: finished 
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | transexitcode: 0
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | exeerrorcode: 0
[2025-06-03 05:20:01] 2025-06-03 09:19:27,732 | INFO     | exeerrordiag: 
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | exitcode: 0
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | exitmsg: OK
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | cpuconsumptiontime: 35948 s
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | nevents: 400
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | neventsw: 0
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | pid: 1433636
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | pgrp: 1433636
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | corecount: 8
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | event service: False
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | sizes: {0: 2404954, 1: 2405209, 5: 2405415, 12: 2405471, 5548: 2432076, 5549: 2432075, 5550: 2441200, 5553: 2441256, 5558: 2441426}
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | --------------------------------------------------
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | 
[2025-06-03 05:20:01] 2025-06-03 09:19:27,733 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-06-03 05:20:01] 2025-06-03 09:19:27,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,749 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:20:01] 2025-06-03 09:19:27,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,749 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:20:01] 2025-06-03 09:19:27,749 | INFO     | job 6677469011 has completed (purged errors)
[2025-06-03 05:20:01] 2025-06-03 09:19:27,749 | INFO     | overall cleanup function is called
[2025-06-03 05:20:01] 2025-06-03 09:19:28,757 | INFO     | --- collectZombieJob: --- 10, [1433636]
[2025-06-03 05:20:01] 2025-06-03 09:19:28,757 | INFO     | zombie collector waiting for pid 1433636
[2025-06-03 05:20:01] 2025-06-03 09:19:28,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:20:01] 2025-06-03 09:19:28,757 | INFO     | collected zombie processes
[2025-06-03 05:20:01] 2025-06-03 09:19:28,757 | INFO     | will attempt to kill all subprocesses of pid=1433636
[2025-06-03 05:20:01] 2025-06-03 09:19:29,034 | INFO     | process IDs to be killed: [1433636] (in reverse order)
[2025-06-03 05:20:01] 2025-06-03 09:19:29,095 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:20:01] 2025-06-03 09:19:29,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:20:01] 2025-06-03 09:19:29,107 | INFO     | did not find any defunct processes belonging to 1433636
[2025-06-03 05:20:01] 2025-06-03 09:19:29,119 | INFO     | did not find any defunct processes belonging to 1433636
[2025-06-03 05:20:01] 2025-06-03 09:19:29,119 | INFO     | ready for new job
[2025-06-03 05:20:01] 2025-06-03 09:19:29,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:20:01] 2025-06-03 09:19:29,121 | INFO     | **************************************
[2025-06-03 05:20:01] 2025-06-03 09:19:29,121 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:20:01] 2025-06-03 09:19:29,121 | INFO     | **************************************
[2025-06-03 05:20:01] 2025-06-03 09:19:29,121 | INFO     | 
[2025-06-03 05:20:01] 2025-06-03 09:19:29,137 | INFO     | architecture information:
[2025-06-03 05:20:01] 2025-06-03 09:19:29,138 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:20:01] 2025-06-03 09:19:29,150 | INFO     | cat /etc/os-release:
[2025-06-03 05:20:01] NAME="CentOS Linux"
[2025-06-03 05:20:01] VERSION="7 (Core)"
[2025-06-03 05:20:01] ID="centos"
[2025-06-03 05:20:01] ID_LIKE="rhel fedora"
[2025-06-03 05:20:01] VERSION_ID="7"
[2025-06-03 05:20:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:20:01] ANSI_COLOR="0;31"
[2025-06-03 05:20:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:20:01] HOME_URL="https://www.centos.org/"
[2025-06-03 05:20:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:20:01] 
[2025-06-03 05:20:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:20:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:20:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:20:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:20:01] 
[2025-06-03 05:20:01] 2025-06-03 09:19:29,150 | INFO     | **************************************
[2025-06-03 05:20:01] 2025-06-03 09:19:29,653 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-06-03 05:20:01] 2025-06-03 09:19:29,670 | INFO     | sufficient remaining disk space (90535100416 B)
[2025-06-03 05:20:01] 2025-06-03 09:19:29,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:20:01] 2025-06-03 09:19:29,670 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:20:01] 2025-06-03 09:19:29,670 | INFO     | update_server=False
[2025-06-03 05:20:01] 2025-06-03 09:19:29,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:20:01] 2025-06-03 09:19:29,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:20:01] 2025-06-03 09:19:29,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:20:01] 2025-06-03 09:19:29,671 | INFO     | aborting loop
[2025-06-03 05:20:01] 2025-06-03 09:19:30,180 | INFO     | all job control threads have been joined
[2025-06-03 05:20:01] 2025-06-03 09:19:30,195 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:20:01] 2025-06-03 09:19:30,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:20:01] 2025-06-03 09:19:30,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:20:01] 2025-06-03 09:19:30,285 | INFO     | all data control threads have been joined
[2025-06-03 05:20:01] 2025-06-03 09:19:30,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:20:01] 2025-06-03 09:19:30,676 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:30,677 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:30,677 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:30,986 | INFO     | all payload control threads have been joined
[2025-06-03 05:20:01] 2025-06-03 09:19:31,061 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:31,184 | INFO     | [job] validate thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:31,185 | INFO     | [job] control thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:31,290 | INFO     | [data] control thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:31,374 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:31,607 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:31,853 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:31,857 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:31,991 | INFO     | [payload] control thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:32,271 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:32,355 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:33,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:20:01] 2025-06-03 09:19:37,056 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:40,698 | INFO     | job.realtimelogging is not enabled
[2025-06-03 05:20:01] 2025-06-03 09:19:41,704 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:20:01] 2025-06-03 09:19:43,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491767445312)>', '<ExcThread(monitor, started 140491064604416)>']
[2025-06-03 05:20:01] 2025-06-03 09:19:43,259 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:20:01] 2025-06-03 09:19:43,260 | INFO     | [monitor] control thread has ended
[2025-06-03 05:20:01] 2025-06-03 09:19:48,245 | INFO     | all workflow threads have been joined
[2025-06-03 05:20:01] 2025-06-03 09:19:48,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:20:01] 2025-06-03 09:19:48,246 | INFO     | traces error code: 0
[2025-06-03 05:20:01] 2025-06-03 09:19:48,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:20:01] 2025-06-03 09:19:48,341 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:20:01] 2025-06-03 09:19:48,343 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:20:01] 2025-06-03 09:19:48,344 [wrapper] pilotpid: 1416711
[2025-06-03 05:20:01] 2025-06-03 09:19:48,345 [wrapper] Pilot exit status: 0
[2025-06-03 05:20:01] 2025-06-03 09:19:48,351 [wrapper] pandaids: 6677469011
[2025-06-03 05:20:01] 2025-06-03 09:19:48,391 [wrapper] cleanup supervisor_pilot 1813715 1416712
[2025-06-03 05:20:01] 2025-06-03 09:19:48,393 [wrapper] Test setup, not cleaning
[2025-06-03 05:20:01] 2025-06-03 09:19:48,395 [wrapper] apfmon messages muted
[2025-06-03 05:20:01] 2025-06-03 09:19:48,396 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:20:01] 2025-06-03 09:19:48,397 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:20:01]  *** Error codes and diagnostics ***
[2025-06-03 05:20:01]     "exeErrorCode": 0,
[2025-06-03 05:20:01]     "exeErrorDiag": "",
[2025-06-03 05:20:01]     "pilotErrorCode": 0,
[2025-06-03 05:20:01]     "pilotErrorDiag": "",
[2025-06-03 05:20:01]  *** Listing of results directory ***
[2025-06-03 05:20:01] total 389992
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 00:37 pilot3.tar.gz
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 00:48 queuedata.json
[2025-06-03 05:20:01] -rwx------. 1 boincer umatlas     37140 Jun  3 00:48 runpilot2-wrapper.sh
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas       100 Jun  3 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:20:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 03:46 run_atlas
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas       105 Jun  3 03:46 job.xml
[2025-06-03 05:20:01] -rw-r--r--. 2 boincer umatlas 217295104 Jun  3 03:46 EVNT.45006593._000792.pool.root.1
[2025-06-03 05:20:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:46 start_atlas.sh
[2025-06-03 05:20:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 03:46 shared
[2025-06-03 05:20:01] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 03:46 input.tar.gz
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas         0 Jun  3 03:46 boinc_lockfile
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas      2523 Jun  3 03:46 pandaJob.out
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas    985499 Jun  3 03:46 agis_schedconf.cvmfs.json
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas   1603667 Jun  3 03:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:20:01] drwx------. 4 boincer umatlas      4096 Jun  3 03:46 pilot3
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas      6860 Jun  3 05:10 init_data.xml
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas 176498663 Jun  3 05:18 HITS.45006595._019803.pool.root.1
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas       529 Jun  3 05:18 boinc_task_state.xml
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas      1034 Jun  3 05:19 memory_monitor_summary.json
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas    327260 Jun  3 05:19 log.45006595._019803.job.log.tgz.1
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas      7716 Jun  3 05:19 heartbeat.json
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas        95 Jun  3 05:19 pilot_heartbeat.json
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas      4425 Jun  3 05:19 pilotlog.txt
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas    533350 Jun  3 05:19 log.45006595._019803.job.log.1
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas       357 Jun  3 05:19 output.list
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas       620 Jun  3 05:19 runtime_log
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas    880640 Jun  3 05:19 result.tar.gz
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas       654 Jun  3 05:19 WApKDmSkYg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdOXKDmvAExBn.diag
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas      8669 Jun  3 05:19 runtime_log.err
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas        27 Jun  3 05:19 wrapper_checkpoint.txt
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 05:20 boinc_mmap_file
[2025-06-03 05:20:01] -rw-r--r--. 1 boincer umatlas     21314 Jun  3 05:20 stderr.txt
[2025-06-03 05:20:01] HITS file was successfully produced:
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas 176498663 Jun  3 05:18 shared/HITS.pool.root.1
[2025-06-03 05:20:01]  *** Contents of shared directory: ***
[2025-06-03 05:20:01] total 385952
[2025-06-03 05:20:01] -rw-r--r--. 2 boincer umatlas 217295104 Jun  3 03:46 ATLAS.root_0
[2025-06-03 05:20:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:46 start_atlas.sh
[2025-06-03 05:20:01] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 03:46 input.tar.gz
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas 176498663 Jun  3 05:18 HITS.pool.root.1
[2025-06-03 05:20:01] -rw-------. 1 boincer umatlas    880640 Jun  3 05:19 result.tar.gz
05:20:03 (1412477): run_atlas exited; CPU time 36184.932624
05:20:03 (1412477): called boinc_finish(0)

</stderr_txt>
]]>

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