Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:39:41 (946343): wrapper (7.7.26015): starting
15:39:41 (946343): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 15:39:41] Arguments: --nthreads 4
[2025-06-06 15:39:41] Threads: 4
[2025-06-06 15:39:41] Checking for CVMFS
[2025-06-06 15:39:41] No cvmfs_config command found, will try listing directly
[2025-06-06 15:39:41] CVMFS is ok
[2025-06-06 15:39:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:39:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 15:39:41] Further information can be found at the LHC@home message board.
[2025-06-06 15:39:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:39:41] Checking for apptainer binary...
[2025-06-06 15:39:41] which: no apptainer in ((null))
[2025-06-06 15:39:41] apptainer is not installed, using version from CVMFS
[2025-06-06 15:39:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:39:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-06 15:39:41] apptainer works
[2025-06-06 15:39:41] Set ATHENA_PROC_NUMBER=4
[2025-06-06 15:39:41] Set ATHENA_CORE_NUMBER=4
[2025-06-06 15:39:41] Starting ATLAS job with PandaID=6677456637
[2025-06-06 15:39:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 17:07:24]  *** The last 200 lines of the pilot log: ***
[2025-06-06 17:07:24]  protocol_id=None
[2025-06-06 17:07:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 17:07:24]  replicas=None
[2025-06-06 17:07:24]  scope=mc23_13p6TeV
[2025-06-06 17:07:24]  status=None
[2025-06-06 17:07:24]  status_code=0
[2025-06-06 17:07:24]  storage_token=
[2025-06-06 17:07:24]  surl=/scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677456637/log.45006595._019122.job.log.tgz.1
[2025-06-06 17:07:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/79/log.45006595._019122.job.log.tgz.1
[2025-06-06 17:07:24]  workdir=None
[2025-06-06 17:07:24] ]
[2025-06-06 17:07:24] 2025-06-06 15:06:57,691 | INFO     | transferring file log.45006595._019122.job.log.tgz.1 from /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677456637/log.45006595._019122.job.log.tgz.1 to /scratch/b
[2025-06-06 17:07:24] 2025-06-06 15:06:57,691 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677456637/log.45006595._019122.job.log.tgz.1 /scratch/boinc/var/slot36/slots/0/lo
[2025-06-06 17:07:24] 2025-06-06 15:06:57,704 | INFO     | adding to output.list: log.45006595._019122.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/79/log.45006595._019122.job.log.tg
[2025-06-06 17:07:24] 2025-06-06 15:06:57,705 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 17:07:24] 2025-06-06 15:06:57,705 | INFO     | summary of transferred files:
[2025-06-06 17:07:24] 2025-06-06 15:06:57,705 | INFO     |  -- lfn=log.45006595._019122.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 17:07:24] 2025-06-06 15:06:57,705 | INFO     | stage-out finished correctly
[2025-06-06 17:07:24] 2025-06-06 15:06:57,752 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 17:07:24] 2025-06-06 15:06:59,510 | WARNING  | process 957606 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 17:07:24] 2025-06-06 15:06:59,510 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677456637/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 17:07:24] 2025-06-06 15:06:59,629 | INFO     | number of running child processes to parent process 957606: 1
[2025-06-06 17:07:24] 2025-06-06 15:06:59,629 | INFO     | maximum number of monitored processes: 6
[2025-06-06 17:07:24] 2025-06-06 15:07:00,575 | INFO     | job 6677456637 has state=finished
[2025-06-06 17:07:24] 2025-06-06 15:07:00,576 | INFO     | preparing for final server update for job 6677456637 in state='finished'
[2025-06-06 17:07:24] 2025-06-06 15:07:00,576 | INFO     | this job has now completed (state=finished)
[2025-06-06 17:07:24] 2025-06-06 15:07:00,576 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 17:07:24] 2025-06-06 15:07:00,576 | INFO     | log transfer has been attempted: DONE
[2025-06-06 17:07:24] 2025-06-06 15:07:00,576 | INFO     | job 6677456637 has finished - writing final server update
[2025-06-06 17:07:24] 2025-06-06 15:07:00,576 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_410965/.job.ad'
[2025-06-06 17:07:24] 2025-06-06 15:07:00,576 | INFO     | total number of processed events: 400 (read)
[2025-06-06 17:07:24] 2025-06-06 15:07:00,579 | INFO     | executing command: lscpu
[2025-06-06 17:07:24] 2025-06-06 15:07:00,619 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 17:07:24] 2025-06-06 15:07:02,132 | INFO     | monitor loop #397: job 0:6677456637 is in state 'finished'
[2025-06-06 17:07:24] 2025-06-06 15:07:02,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:07:24] 2025-06-06 15:07:04,635 | INFO     | monitor loop #398: job 0:6677456637 is in state 'finished'
[2025-06-06 17:07:24] 2025-06-06 15:07:04,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:07:24] 2025-06-06 15:07:05,004 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 17:07:24] 2025-06-06 15:07:05,004 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677456637/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 17:07:24] 2025-06-06 15:07:05,005 | INFO     | extracted standard info from prmon json
[2025-06-06 17:07:24] 2025-06-06 15:07:05,005 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 17:07:24] 2025-06-06 15:07:05,005 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 17:07:24] 2025-06-06 15:07:05,005 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 17:07:24] 2025-06-06 15:07:05,005 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 17:07:24] 2025-06-06 15:07:05,007 | INFO     | fitting pss+swap vs Time
[2025-06-06 17:07:24] 2025-06-06 15:07:05,007 | INFO     | sum of square deviations: 152858680.0
[2025-06-06 17:07:24] 2025-06-06 15:07:05,007 | INFO     | sum of deviations: -10148753671.0
[2025-06-06 17:07:24] 2025-06-06 15:07:05,007 | INFO     | mean x: 1749219892.0
[2025-06-06 17:07:24] 2025-06-06 15:07:05,007 | INFO     | mean y: 2440349.0
[2025-06-06 17:07:24] 2025-06-06 15:07:05,007 | INFO     | -- intersect: 116138480515.78165
[2025-06-06 17:07:24] 2025-06-06 15:07:05,007 | INFO     | intersect: 116138480515.78165
[2025-06-06 17:07:24] 2025-06-06 15:07:05,007 | INFO     | chi2: 0.18124498832101146
[2025-06-06 17:07:24] 2025-06-06 15:07:05,007 | INFO     | -- intersect: 116138480515.78165
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | current memory leak: -66.39 B/s (using 79 data points, chi2=0.18)
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | ..............................
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | . Timing measurements:
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | . get job = 0 s
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | . initial setup = 1 s
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | . payload setup = 4 s
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | . stage-in = 0 s
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | . payload execution = 5208 s
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | . stage-out = 0 s
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | . log creation = 0 s
[2025-06-06 17:07:24] 2025-06-06 15:07:05,008 | INFO     | ..............................
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | 
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | job summary report
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | --------------------------------------------------
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | PanDA job id: 6677456637
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | task id: 45006595
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | errors: (none)
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | pilot state: finished 
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | transexitcode: 0
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | exeerrorcode: 0
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | exeerrordiag: 
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | exitcode: 0
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | exitmsg: OK
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | cpuconsumptiontime: 20124 s
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | nevents: 400
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | neventsw: 0
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | pid: 957606
[2025-06-06 17:07:24] 2025-06-06 15:07:05,056 | INFO     | pgrp: 957606
[2025-06-06 17:07:24] 2025-06-06 15:07:05,057 | INFO     | corecount: 4
[2025-06-06 17:07:24] 2025-06-06 15:07:05,057 | INFO     | event service: False
[2025-06-06 17:07:24] 2025-06-06 15:07:05,057 | INFO     | sizes: {0: 2396512, 1: 2397379, 3: 2397585, 11: 2397613, 5216: 2424116, 5217: 2433263, 5224: 2433377}
[2025-06-06 17:07:24] 2025-06-06 15:07:05,057 | INFO     | --------------------------------------------------
[2025-06-06 17:07:24] 2025-06-06 15:07:05,057 | INFO     | 
[2025-06-06 17:07:24] 2025-06-06 15:07:05,057 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 17:07:24] 2025-06-06 15:07:05,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 17:07:24] 2025-06-06 15:07:05,071 | INFO     | job 6677456637 has completed (purged errors)
[2025-06-06 17:07:24] 2025-06-06 15:07:05,071 | INFO     | overall cleanup function is called
[2025-06-06 17:07:24] 2025-06-06 15:07:06,077 | INFO     | --- collectZombieJob: --- 10, [957606]
[2025-06-06 17:07:24] 2025-06-06 15:07:06,077 | INFO     | zombie collector waiting for pid 957606
[2025-06-06 17:07:24] 2025-06-06 15:07:06,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 17:07:24] 2025-06-06 15:07:06,077 | INFO     | collected zombie processes
[2025-06-06 17:07:24] 2025-06-06 15:07:06,077 | INFO     | will attempt to kill all subprocesses of pid=957606
[2025-06-06 17:07:24] 2025-06-06 15:07:06,199 | INFO     | process IDs to be killed: [957606] (in reverse order)
[2025-06-06 17:07:24] 2025-06-06 15:07:06,249 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 17:07:24] 2025-06-06 15:07:06,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 17:07:24] 2025-06-06 15:07:06,254 | INFO     | did not find any defunct processes belonging to 957606
[2025-06-06 17:07:24] 2025-06-06 15:07:06,258 | INFO     | did not find any defunct processes belonging to 957606
[2025-06-06 17:07:24] 2025-06-06 15:07:06,258 | INFO     | ready for new job
[2025-06-06 17:07:24] 2025-06-06 15:07:06,258 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 17:07:24] 2025-06-06 15:07:06,259 | INFO     | **************************************
[2025-06-06 17:07:24] 2025-06-06 15:07:06,259 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 17:07:24] 2025-06-06 15:07:06,259 | INFO     | **************************************
[2025-06-06 17:07:24] 2025-06-06 15:07:06,259 | INFO     | 
[2025-06-06 17:07:24] 2025-06-06 15:07:06,261 | INFO     | architecture information:
[2025-06-06 17:07:24] 2025-06-06 15:07:06,262 | INFO     | executing command: cat /etc/os-release
[2025-06-06 17:07:24] 2025-06-06 15:07:06,271 | INFO     | cat /etc/os-release:
[2025-06-06 17:07:24] NAME="CentOS Linux"
[2025-06-06 17:07:24] VERSION="7 (Core)"
[2025-06-06 17:07:24] ID="centos"
[2025-06-06 17:07:24] ID_LIKE="rhel fedora"
[2025-06-06 17:07:24] VERSION_ID="7"
[2025-06-06 17:07:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 17:07:24] ANSI_COLOR="0;31"
[2025-06-06 17:07:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 17:07:24] HOME_URL="https://www.centos.org/"
[2025-06-06 17:07:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 17:07:24] 
[2025-06-06 17:07:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 17:07:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 17:07:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 17:07:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 17:07:24] 
[2025-06-06 17:07:24] 2025-06-06 15:07:06,271 | INFO     | **************************************
[2025-06-06 17:07:24] 2025-06-06 15:07:06,774 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-06 17:07:24] 2025-06-06 15:07:06,787 | INFO     | sufficient remaining disk space (706872344576 B)
[2025-06-06 17:07:24] 2025-06-06 15:07:06,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 17:07:24] 2025-06-06 15:07:06,788 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 17:07:24] 2025-06-06 15:07:06,788 | INFO     | update_server=False
[2025-06-06 17:07:24] 2025-06-06 15:07:06,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 17:07:24] 2025-06-06 15:07:06,788 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 17:07:24] 2025-06-06 15:07:06,788 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:07:24] 2025-06-06 15:07:06,789 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 17:07:24] 2025-06-06 15:07:06,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 17:07:24] 2025-06-06 15:07:06,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 17:07:24] 2025-06-06 15:07:07,138 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 17:07:24] 2025-06-06 15:07:07,139 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 17:07:24] 2025-06-06 15:07:07,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:07:24] 2025-06-06 15:07:07,139 | INFO     | will abort loop
[2025-06-06 17:07:24] 2025-06-06 15:07:07,170 | INFO     | all data control threads have been joined
[2025-06-06 17:07:24] 2025-06-06 15:07:07,281 | INFO     | all job control threads have been joined
[2025-06-06 17:07:24] 2025-06-06 15:07:07,572 | INFO     | all payload control threads have been joined
[2025-06-06 17:07:24] 2025-06-06 15:07:07,793 | INFO     | [job] retrieve thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:07,794 | INFO     | [job] queue monitor thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:07,907 | INFO     | [payload] validate_post thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,144 | INFO     | [job] job monitor thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,163 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,176 | INFO     | [data] control thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 17:07:24] 2025-06-06 15:07:08,287 | INFO     | [job] control thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 17:07:24] 2025-06-06 15:07:08,348 | INFO     | [job] validate thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,390 | INFO     | [data] copytool_in thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,493 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,577 | INFO     | [payload] control thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,595 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:08,774 | INFO     | [payload] failed_post thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:10,270 | INFO     | [data] copytool_out thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:12,343 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:17,036 | INFO     | job.realtimelogging is not enabled
[2025-06-06 17:07:24] 2025-06-06 15:07:18,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 17:07:24] 2025-06-06 15:07:19,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22392818227008)>', '<ExcThread(monitor, started 22392579520256)>']
[2025-06-06 17:07:24] 2025-06-06 15:07:19,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 17:07:24] 2025-06-06 15:07:19,856 | INFO     | [monitor] control thread has ended
[2025-06-06 17:07:24] 2025-06-06 15:07:24,265 | INFO     | all workflow threads have been joined
[2025-06-06 17:07:24] 2025-06-06 15:07:24,265 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 17:07:24] 2025-06-06 15:07:24,266 | INFO     | traces error code: 0
[2025-06-06 17:07:24] 2025-06-06 15:07:24,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 17:07:24] 2025-06-06 15:07:24,355 [wrapper] ==== pilot stdout END ====
[2025-06-06 17:07:24] 2025-06-06 15:07:24,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 17:07:24] 2025-06-06 15:07:24,358 [wrapper] pilotpid: 950052
[2025-06-06 17:07:24] 2025-06-06 15:07:24,360 [wrapper] Pilot exit status: 0
[2025-06-06 17:07:24] 2025-06-06 15:07:24,367 [wrapper] pandaids: 6677456637
[2025-06-06 17:07:24] 2025-06-06 15:07:24,401 [wrapper] cleanup supervisor_pilot 1000121 950053
[2025-06-06 17:07:24] 2025-06-06 15:07:24,403 [wrapper] Test setup, not cleaning
[2025-06-06 17:07:24] 2025-06-06 15:07:24,405 [wrapper] apfmon messages muted
[2025-06-06 17:07:24] 2025-06-06 15:07:24,407 [wrapper] ==== wrapper stdout END ====
[2025-06-06 17:07:24] 2025-06-06 15:07:24,408 [wrapper] ==== wrapper stderr END ====
[2025-06-06 17:07:24]  *** Error codes and diagnostics ***
[2025-06-06 17:07:24]     "exeErrorCode": 0,
[2025-06-06 17:07:24]     "exeErrorDiag": "",
[2025-06-06 17:07:24]     "pilotErrorCode": 0,
[2025-06-06 17:07:24]     "pilotErrorDiag": "",
[2025-06-06 17:07:24]  *** Listing of results directory ***
[2025-06-06 17:07:24] total 387660
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc    495897 Jun  3 06:08 pilot3.tar.gz
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc      5111 Jun  3 06:09 queuedata.json
[2025-06-06 17:07:24] -rwx------ 1 boinc boinc     37140 Jun  3 06:10 runpilot2-wrapper.sh
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc       100 Jun  6 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 17:07:24] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 15:39 run_atlas
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc       105 Jun  6 15:39 job.xml
[2025-06-06 17:07:24] -rw-r--r-- 2 boinc boinc 212755343 Jun  6 15:39 EVNT.45006593._000765.pool.root.1
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc      6635 Jun  6 15:39 init_data.xml
[2025-06-06 17:07:24] -rw-r--r-- 2 boinc boinc     15093 Jun  6 15:39 start_atlas.sh
[2025-06-06 17:07:24] drwxrwx--x 2 boinc boinc      4096 Jun  6 15:39 shared
[2025-06-06 17:07:24] -rw-r--r-- 2 boinc boinc    508881 Jun  6 15:39 input.tar.gz
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc         0 Jun  6 15:39 boinc_lockfile
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc      2524 Jun  6 15:39 pandaJob.out
[2025-06-06 17:07:24] -rw------- 1 boinc boinc    985728 Jun  6 15:39 agis_schedconf.cvmfs.json
[2025-06-06 17:07:24] -rw------- 1 boinc boinc   1598969 Jun  6 15:39 agis_ddmendpoints.agis.ALL.json
[2025-06-06 17:07:24] drwx------ 4 boinc boinc      4096 Jun  6 15:39 pilot3
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc       530 Jun  6 17:06 boinc_task_state.xml
[2025-06-06 17:07:24] -rw------- 1 boinc boinc 178854395 Jun  6 17:06 HITS.45006595._019122.pool.root.1
[2025-06-06 17:07:24] -rw------- 1 boinc boinc        95 Jun  6 17:06 pilot_heartbeat.json
[2025-06-06 17:07:24] -rw------- 1 boinc boinc      1033 Jun  6 17:06 memory_monitor_summary.json
[2025-06-06 17:07:24] -rw------- 1 boinc boinc    255335 Jun  6 17:06 log.45006595._019122.job.log.tgz.1
[2025-06-06 17:07:24] -rw------- 1 boinc boinc      7724 Jun  6 17:07 heartbeat.json
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc      8192 Jun  6 17:07 boinc_mmap_file
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc        27 Jun  6 17:07 wrapper_checkpoint.txt
[2025-06-06 17:07:24] -rw------- 1 boinc boinc      4744 Jun  6 17:07 pilotlog.txt
[2025-06-06 17:07:24] -rw------- 1 boinc boinc    505906 Jun  6 17:07 log.45006595._019122.job.log.1
[2025-06-06 17:07:24] -rw------- 1 boinc boinc       357 Jun  6 17:07 output.list
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc       620 Jun  6 17:07 runtime_log
[2025-06-06 17:07:24] -rw------- 1 boinc boinc    778240 Jun  6 17:07 result.tar.gz
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc      9025 Jun  6 17:07 runtime_log.err
[2025-06-06 17:07:24] -rw------- 1 boinc boinc       661 Jun  6 17:07 BGMMDmJAYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmothKDminwQEn.diag
[2025-06-06 17:07:24] -rw-r--r-- 1 boinc boinc     21567 Jun  6 17:07 stderr.txt
[2025-06-06 17:07:24] HITS file was successfully produced:
[2025-06-06 17:07:24] -rw------- 1 boinc boinc 178854395 Jun  6 17:06 shared/HITS.pool.root.1
[2025-06-06 17:07:24]  *** Contents of shared directory: ***
[2025-06-06 17:07:24] total 383720
[2025-06-06 17:07:24] -rw-r--r-- 2 boinc boinc 212755343 Jun  6 15:39 ATLAS.root_0
[2025-06-06 17:07:24] -rw-r--r-- 2 boinc boinc     15093 Jun  6 15:39 start_atlas.sh
[2025-06-06 17:07:24] -rw-r--r-- 2 boinc boinc    508881 Jun  6 15:39 input.tar.gz
[2025-06-06 17:07:24] -rw------- 1 boinc boinc 178854395 Jun  6 17:06 HITS.pool.root.1
[2025-06-06 17:07:24] -rw------- 1 boinc boinc    778240 Jun  6 17:07 result.tar.gz
17:07:25 (946343): run_atlas exited; CPU time 20186.672099
17:07:25 (946343): called boinc_finish(0)

</stderr_txt>
]]>

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