Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:37:16 (1455989): wrapper (7.7.26015): starting
00:37:16 (1455989): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 00:37:16] Arguments: --nthreads 12
[2025-06-03 00:37:16] Threads: 12
[2025-06-03 00:37:16] Checking for CVMFS
[2025-06-03 00:37:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:37:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:37:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 00:37:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 00:37:16] 2.11.5.0 2315690 31341 253740 146734 3 522 30823476 45568001 12240 130560 0 256965433 99.777 173892131 29483 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 00:37:16] CVMFS is ok
[2025-06-03 00:37:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 00:37:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 00:37:16] Further information can be found at the LHC@home message board.
[2025-06-03 00:37:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 00:37:16] Checking for apptainer binary...
[2025-06-03 00:37:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 00:37:16] Running /usr/bin/apptainer --version
[2025-06-03 00:37:16] apptainer version 1.4.0-1.el9
[2025-06-03 00:37:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 00:37:17] wns0052.triumf.lcg
[2025-06-03 00:37:17] apptainer works
[2025-06-03 00:37:17] Set ATHENA_PROC_NUMBER=12
[2025-06-03 00:37:17] Set ATHENA_CORE_NUMBER=12
[2025-06-03 00:37:17] Starting ATLAS job with PandaID=6677495056
[2025-06-03 00:37:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 00:40:31]  *** The last 200 lines of the pilot log: ***
[2025-06-03 00:40:31] 2025-06-03 07:40:17,285 | INFO     | extracted standard info from prmon json
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | found no stored workdir sizes
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 00:40:31] 2025-06-03 07:40:17,287 | WARNING  | wrong length of table data, x=[1748936279.0], y=[1987.0] (must be same and length>=4)
[2025-06-03 00:40:31] 2025-06-03 07:40:17,287 | INFO     | ..............................
[2025-06-03 00:40:31] 2025-06-03 07:40:17,287 | INFO     | . Timing measurements:
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . get job = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . initial setup = 3 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . payload setup = 7 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . stage-in = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . payload execution = 20 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . stage-out = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . log creation = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | ..............................
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677495056/pilotlog.txt
[2025-06-03 00:40:31] 2025-06-03 07:40:17,304 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 00:40:31] - Log from pilotlog.txt -
[2025-06-03 00:40:31] 2025-06-03 07:40:17,285 | INFO     | extracted standard info from prmon json
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | found no stored workdir sizes
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 00:40:31] 2025-06-03 07:40:17,287 | WARNING  | wrong length of table data, x=[1748936279.0], y=[1987.0] (must be same and length>=4)
[2025-06-03 00:40:31] 2025-06-03 07:40:17,287 | INFO     | ..............................
[2025-06-03 00:40:31] 2025-06-03 07:40:17,287 | INFO     | . Timing measurements:
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . get job = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . initial setup = 3 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . payload setup = 7 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . stage-in = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . payload execution = 20 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . stage-out = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . log creation = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | ..............................
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677495056/pilotlog.txt
[2025-06-03 00:40:31] 2025-06-03 07:40:17,305 | WARNING  | 
[2025-06-03 00:40:31] [begin log extracts]
[2025-06-03 00:40:31] - Log from pilotlog.txt -
[2025-06-03 00:40:31] 2025-06-03 07:40:17,285 | INFO     | extracted standard info from prmon json
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | WARNING  | found no stored workdir sizes
[2025-06-03 00:40:31] 2025-06-03 07:40:17,286 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 00:40:31] 2025-06-03 07:40:17,287 | WARNING  | wrong length of table data, x=[1748936279.0], y=[1987.0] (must be same and length>=4)
[2025-06-03 00:40:31] 2025-06-03 07:40:17,287 | INFO     | ..............................
[2025-06-03 00:40:31] 2025-06-03 07:40:17,287 | INFO     | . Timing measurements:
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . get job = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . initial setup = 3 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . payload setup = 7 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . stage-in = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . payload execution = 20 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . stage-out = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | . log creation = 0 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | ..............................
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 00:40:31] 2025-06-03 07:40:17,288 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677495056/pilotlog.txt
[2025-06-03 00:40:31] [end log extracts]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,305 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 00:40:31] 2025-06-03 07:40:17,306 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | 
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | job summary report
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | --------------------------------------------------
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | PanDA job id: 6677495056
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | task id: 45006595
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 00:38:09,059 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | pilot state: failed 
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | transexitcode: 65
[2025-06-03 00:40:31] 2025-06-03 07:40:17,386 | INFO     | exeerrorcode: 65
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | exitcode: 65
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | cpuconsumptiontime: 21 s
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | nevents: 0
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | neventsw: 0
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | pid: 1467796
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | pgrp: 1467796
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | corecount: 12
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | event service: False
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | sizes: {0: 2405008, 1: 2405207, 7: 2405413, 11: 2405441, 31: 2432908, 32: 2432908, 152: 2433178}
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | --------------------------------------------------
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | 
[2025-06-03 00:40:31] 2025-06-03 07:40:17,387 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 00:40:31] 2025-06-03 07:40:17,410 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,411 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,411 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,411 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 00:40:31] 2025-06-03 07:40:17,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,413 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 00:40:31] 2025-06-03 07:40:17,413 | INFO     | job 6677495056 has completed (purged errors)
[2025-06-03 00:40:31] 2025-06-03 07:40:17,413 | INFO     | overall cleanup function is called
[2025-06-03 00:40:31] 2025-06-03 07:40:18,420 | INFO     | --- collectZombieJob: --- 10, [1467796]
[2025-06-03 00:40:31] 2025-06-03 07:40:18,421 | INFO     | zombie collector waiting for pid 1467796
[2025-06-03 00:40:31] 2025-06-03 07:40:18,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 00:40:31] 2025-06-03 07:40:18,421 | INFO     | collected zombie processes
[2025-06-03 00:40:31] 2025-06-03 07:40:18,421 | INFO     | will attempt to kill all subprocesses of pid=1467796
[2025-06-03 00:40:31] 2025-06-03 07:40:18,681 | INFO     | process IDs to be killed: [1467796] (in reverse order)
[2025-06-03 00:40:31] 2025-06-03 07:40:18,779 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 00:40:31] 2025-06-03 07:40:18,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 00:40:31] 2025-06-03 07:40:18,795 | INFO     | did not find any defunct processes belonging to 1467796
[2025-06-03 00:40:31] 2025-06-03 07:40:18,805 | INFO     | did not find any defunct processes belonging to 1467796
[2025-06-03 00:40:31] 2025-06-03 07:40:18,806 | INFO     | ready for new job
[2025-06-03 00:40:31] 2025-06-03 07:40:18,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 00:40:31] 2025-06-03 07:40:18,807 | INFO     | **************************************
[2025-06-03 00:40:31] 2025-06-03 07:40:18,807 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 00:40:31] 2025-06-03 07:40:18,807 | INFO     | **************************************
[2025-06-03 00:40:31] 2025-06-03 07:40:18,808 | INFO     | 
[2025-06-03 00:40:31] 2025-06-03 07:40:18,810 | INFO     | architecture information:
[2025-06-03 00:40:31] 2025-06-03 07:40:18,810 | INFO     | executing command: cat /etc/os-release
[2025-06-03 00:40:31] 2025-06-03 07:40:18,826 | INFO     | cat /etc/os-release:
[2025-06-03 00:40:31] NAME="CentOS Linux"
[2025-06-03 00:40:31] VERSION="7 (Core)"
[2025-06-03 00:40:31] ID="centos"
[2025-06-03 00:40:31] ID_LIKE="rhel fedora"
[2025-06-03 00:40:31] VERSION_ID="7"
[2025-06-03 00:40:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 00:40:31] ANSI_COLOR="0;31"
[2025-06-03 00:40:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 00:40:31] HOME_URL="https://www.centos.org/"
[2025-06-03 00:40:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 00:40:31] 
[2025-06-03 00:40:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 00:40:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 00:40:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 00:40:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 00:40:31] 
[2025-06-03 00:40:31] 2025-06-03 07:40:18,827 | INFO     | **************************************
[2025-06-03 00:40:31] 2025-06-03 07:40:19,337 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 00:40:31] 2025-06-03 07:40:19,356 | INFO     | sufficient remaining disk space (1925374279680 B)
[2025-06-03 00:40:31] 2025-06-03 07:40:19,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 00:40:31] 2025-06-03 07:40:19,357 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 00:40:31] 2025-06-03 07:40:19,357 | INFO     | update_server=False
[2025-06-03 00:40:31] 2025-06-03 07:40:19,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 00:40:31] 2025-06-03 07:40:19,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:40:31] 2025-06-03 07:40:19,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:40:31] 2025-06-03 07:40:19,359 | INFO     | aborting loop
[2025-06-03 00:40:31] 2025-06-03 07:40:19,360 | INFO     | all job control threads have been joined
[2025-06-03 00:40:31] 2025-06-03 07:40:19,487 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 00:40:31] 2025-06-03 07:40:19,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 00:40:31] 2025-06-03 07:40:19,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 00:40:31] 2025-06-03 07:40:20,288 | INFO     | all data control threads have been joined
[2025-06-03 00:40:31] 2025-06-03 07:40:20,363 | INFO     | [job] retrieve thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:20,363 | INFO     | [job] queue monitor thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:20,365 | INFO     | [job] job monitor thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:20,367 | INFO     | [job] control thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:20,466 | INFO     | all payload control threads have been joined
[2025-06-03 00:40:31] 2025-06-03 07:40:20,547 | INFO     | [payload] validate_post thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:20,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 00:40:31] 2025-06-03 07:40:20,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 00:40:31] 2025-06-03 07:40:20,946 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:21,017 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:21,178 | INFO     | [job] validate thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:21,247 | INFO     | [payload] failed_post thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:21,266 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:21,294 | INFO     | [data] control thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:21,472 | INFO     | [payload] control thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:21,519 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:21,856 | INFO     | [data] copytool_in thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:22,595 | INFO     | [data] copytool_out thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:24,625 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 00:40:31] 2025-06-03 07:40:26,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731931985728)>', '<ExcThread(monitor, started 139731123828480)>']
[2025-06-03 00:40:31] 2025-06-03 07:40:26,519 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 00:40:31] 2025-06-03 07:40:26,519 | INFO     | [monitor] control thread has ended
[2025-06-03 00:40:31] 2025-06-03 07:40:31,357 | INFO     | all workflow threads have been joined
[2025-06-03 00:40:31] 2025-06-03 07:40:31,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 00:40:31] 2025-06-03 07:40:31,358 | INFO     | traces error code: 0
[2025-06-03 00:40:31] 2025-06-03 07:40:31,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 00:40:31] 2025-06-03 07:40:31,519 [wrapper] ==== pilot stdout END ====
[2025-06-03 00:40:31] 2025-06-03 07:40:31,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 00:40:31] 2025-06-03 07:40:31,527 [wrapper] pilotpid: 1459557
[2025-06-03 00:40:31] 2025-06-03 07:40:31,530 [wrapper] Pilot exit status: 0
[2025-06-03 00:40:31] 2025-06-03 07:40:31,546 [wrapper] pandaids: 6677495056
[2025-06-03 00:40:31] 2025-06-03 07:40:31,613 [wrapper] cleanup supervisor_pilot 1459563 1459558
[2025-06-03 00:40:31] 2025-06-03 07:40:31,617 [wrapper] Test setup, not cleaning
[2025-06-03 00:40:31] 2025-06-03 07:40:31,620 [wrapper] apfmon messages muted
[2025-06-03 00:40:31] 2025-06-03 07:40:31,624 [wrapper] ==== wrapper stdout END ====
[2025-06-03 00:40:31] 2025-06-03 07:40:31,627 [wrapper] ==== wrapper stderr END ====
[2025-06-03 00:40:31]  *** Error codes and diagnostics ***
[2025-06-03 00:40:31]     "exeErrorCode": 65,
[2025-06-03 00:40:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 00:40:31]     "pilotErrorCode": 1305,
[2025-06-03 00:40:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 00:40:31]  *** Listing of results directory ***
[2025-06-03 00:40:31] total 214180
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc    495897 Jun  2 23:33 pilot3.tar.gz
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc      5111 Jun  2 23:35 queuedata.json
[2025-06-03 00:40:31] -rwx------. 1 boinc boinc     37140 Jun  2 23:35 runpilot2-wrapper.sh
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 00:40:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:37 run_atlas
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:37 job.xml
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc      6596 Jun  3 00:37 init_data.xml
[2025-06-03 00:40:31] -rw-r--r--. 2 boinc boinc 215301009 Jun  3 00:37 EVNT.45006593._000895.pool.root.1
[2025-06-03 00:40:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:37 start_atlas.sh
[2025-06-03 00:40:31] drwxrwx--x. 2 boinc boinc      4096 Jun  3 00:37 shared
[2025-06-03 00:40:31] -rw-r--r--. 2 boinc boinc    508885 Jun  3 00:37 input.tar.gz
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:37 boinc_lockfile
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc      2524 Jun  3 00:37 pandaJob.out
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc    985499 Jun  3 00:37 agis_schedconf.cvmfs.json
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc   1603667 Jun  3 00:37 agis_ddmendpoints.agis.ALL.json
[2025-06-03 00:40:31] drwx------. 4 boinc boinc      4096 Jun  3 00:37 pilot3
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc       522 Jun  3 00:38 boinc_task_state.xml
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc       971 Jun  3 00:38 memory_monitor_summary.json
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc     19561 Jun  3 00:38 log.45006595._022366.job.log.tgz.1
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc        95 Jun  3 00:39 pilot_heartbeat.json
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc      8342 Jun  3 00:40 heartbeat.json
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc        22 Jun  3 00:40 wrapper_checkpoint.txt
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc      8192 Jun  3 00:40 boinc_mmap_file
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc      4352 Jun  3 00:40 pilotlog.txt
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc     73052 Jun  3 00:40 log.45006595._022366.job.log.1
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc       188 Jun  3 00:40 output.list
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc       620 Jun  3 00:40 runtime_log
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc    112640 Jun  3 00:40 result.tar.gz
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc      8484 Jun  3 00:40 runtime_log.err
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc       644 Jun  3 00:40 02ZKDmNQag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwdXKDmzSz6dm.diag
[2025-06-03 00:40:31] -rw-r--r--. 1 boinc boinc     21438 Jun  3 00:40 stderr.txt
[2025-06-03 00:40:31] No HITS result produced
[2025-06-03 00:40:31]  *** Contents of shared directory: ***
[2025-06-03 00:40:31] total 210888
[2025-06-03 00:40:31] -rw-r--r--. 2 boinc boinc 215301009 Jun  3 00:37 ATLAS.root_0
[2025-06-03 00:40:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:37 start_atlas.sh
[2025-06-03 00:40:31] -rw-r--r--. 2 boinc boinc    508885 Jun  3 00:37 input.tar.gz
[2025-06-03 00:40:31] -rw-------. 1 boinc boinc    112640 Jun  3 00:40 result.tar.gz
00:40:33 (1455989): run_atlas exited; CPU time 25.359721
00:40:33 (1455989): called boinc_finish(0)

</stderr_txt>
]]>

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