Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:45:13 (10586): wrapper (7.7.26015): starting
18:45:13 (10586): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:45:13] Arguments: --nthreads 8
[2025-06-03 18:45:13] Threads: 8
[2025-06-03 18:45:13] Checking for CVMFS
[2025-06-03 18:45:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:45:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:45:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:45:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:45:14] 2.11.2.0 24500 32191 93516 146749 1 184 15859976 25165825 4105 130560 0 15497922 99.804 18737321 4265 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 18:45:14] CVMFS is ok
[2025-06-03 18:45:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:45:14] Checking for apptainer binary...
[2025-06-03 18:45:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:45:14] Running /usr/bin/apptainer --version
[2025-06-03 18:45:14] apptainer version 1.3.2-1.el7
[2025-06-03 18:45:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:45:16] cg-vwn232.simple-grid.lan
[2025-06-03 18:45:16] apptainer works
[2025-06-03 18:45:16] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:45:16] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:45:16] Starting ATLAS job with PandaID=6677469133
[2025-06-03 18:45:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:40:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:40:40] 2025-06-03 20:32:42,862 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6677469133/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:40:40] 2025-06-03 20:32:42,862 | INFO     | extracted standard info from prmon json
[2025-06-03 23:40:40] 2025-06-03 20:32:42,863 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:40:40] 2025-06-03 20:32:42,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:40:40] 2025-06-03 20:32:42,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:40:40] 2025-06-03 20:32:42,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:40:40] 2025-06-03 20:32:42,868 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:40:40] 2025-06-03 20:32:42,869 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 23:40:40] 2025-06-03 20:32:42,871 | INFO     | sum of deviations: -41778188313.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,871 | INFO     | mean x: 1748976033.5
[2025-06-03 23:40:40] 2025-06-03 20:32:42,871 | INFO     | mean y: 2519198.1651376146
[2025-06-03 23:40:40] 2025-06-03 20:32:42,871 | INFO     | -- intersect: 22747977670.010937
[2025-06-03 23:40:40] 2025-06-03 20:32:42,880 | INFO     | intersect: 22747977670.010937
[2025-06-03 23:40:40] 2025-06-03 20:32:42,881 | INFO     | chi2: 2.5401129800391153
[2025-06-03 23:40:40] 2025-06-03 20:32:42,881 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,883 | INFO     | sum of deviations: -26020137430.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,883 | INFO     | mean x: 1748975881.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,883 | INFO     | mean y: 2530135.441314554
[2025-06-03 23:40:40] 2025-06-03 20:32:42,884 | INFO     | -- intersect: 15190011036.201504
[2025-06-03 23:40:40] 2025-06-03 20:32:42,884 | INFO     | intersect: 15190011036.201504
[2025-06-03 23:40:40] 2025-06-03 20:32:42,884 | INFO     | chi2: 1.7745310800474114
[2025-06-03 23:40:40] 2025-06-03 20:32:42,884 | INFO     | current chi2=1.7745310800474114 (change=30.139679061831124 %)
[2025-06-03 23:40:40] 2025-06-03 20:32:42,885 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,886 | INFO     | sum of deviations: -24791719643.499992
[2025-06-03 23:40:40] 2025-06-03 20:32:42,886 | INFO     | mean x: 1748975728.5
[2025-06-03 23:40:40] 2025-06-03 20:32:42,887 | INFO     | mean y: 2531044.331730769
[2025-06-03 23:40:40] 2025-06-03 20:32:42,887 | INFO     | -- intersect: 15541852259.129225
[2025-06-03 23:40:40] 2025-06-03 20:32:42,887 | INFO     | intersect: 15541852259.129225
[2025-06-03 23:40:40] 2025-06-03 20:32:42,887 | INFO     | chi2: 1.7731936524701661
[2025-06-03 23:40:40] 2025-06-03 20:32:42,887 | INFO     | current chi2=1.7731936524701661 (change=0.0753679432433258 %)
[2025-06-03 23:40:40] 2025-06-03 20:32:42,887 | INFO     | right removable region: 207
[2025-06-03 23:40:40] 2025-06-03 20:32:42,888 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,889 | INFO     | sum of deviations: -76562764263.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,890 | INFO     | mean x: 1748976186.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,890 | INFO     | mean y: 2543519.1220657276
[2025-06-03 23:40:40] 2025-06-03 20:32:42,890 | INFO     | -- intersect: 44690844103.97537
[2025-06-03 23:40:40] 2025-06-03 20:32:42,890 | INFO     | intersect: 44690844103.97537
[2025-06-03 23:40:40] 2025-06-03 20:32:42,890 | INFO     | chi2: 1.0133285276146275
[2025-06-03 23:40:40] 2025-06-03 20:32:42,891 | INFO     | current chi2=1.0133285276146275 (change=60.10695053418359 %)
[2025-06-03 23:40:40] 2025-06-03 20:32:42,891 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,893 | INFO     | sum of deviations: -75144921712.49998
[2025-06-03 23:40:40] 2025-06-03 20:32:42,893 | INFO     | mean x: 1748976338.5
[2025-06-03 23:40:40] 2025-06-03 20:32:42,893 | INFO     | mean y: 2542429.860576923
[2025-06-03 23:40:40] 2025-06-03 20:32:42,893 | INFO     | -- intersect: 47103005818.77702
[2025-06-03 23:40:40] 2025-06-03 20:32:42,893 | INFO     | intersect: 47103005818.77702
[2025-06-03 23:40:40] 2025-06-03 20:32:42,893 | INFO     | chi2: 0.9928964394603061
[2025-06-03 23:40:40] 2025-06-03 20:32:42,894 | INFO     | current chi2=0.9928964394603061 (change=2.016334051348429 %)
[2025-06-03 23:40:40] 2025-06-03 20:32:42,894 | INFO     | left removable region: 20
[2025-06-03 23:40:40] 2025-06-03 20:32:42,894 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,896 | INFO     | sum of deviations: -45795779951.00001
[2025-06-03 23:40:40] 2025-06-03 20:32:42,896 | INFO     | mean x: 1748976308.0
[2025-06-03 23:40:40] 2025-06-03 20:32:42,896 | INFO     | mean y: 2546324.855614973
[2025-06-03 23:40:40] 2025-06-03 20:32:42,896 | INFO     | -- intersect: 39504498821.313866
[2025-06-03 23:40:40] 2025-06-03 20:32:42,896 | INFO     | intersect: 39504498821.313866
[2025-06-03 23:40:40] 2025-06-03 20:32:42,896 | INFO     | chi2: 0.19038062004630207
[2025-06-03 23:40:40] 2025-06-03 20:32:42,897 | INFO     | -- intersect: 39504498821.313866
[2025-06-03 23:40:40] 2025-06-03 20:32:42,897 | INFO     | current memory leak: -22.59 B/s (using 187 data points, chi2=0.19)
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | ..............................
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | . Timing measurements:
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | . get job = 0 s
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | . initial setup = 3 s
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | . payload setup = 82 s
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | . stage-in = 0 s
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | . payload execution = 13282 s
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | . stage-out = 3 s
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | . log creation = 1 s
[2025-06-03 23:40:40] 2025-06-03 20:32:42,898 | INFO     | ..............................
[2025-06-03 23:40:40] 2025-06-03 20:32:43,059 | INFO     | 
[2025-06-03 23:40:40] 2025-06-03 20:32:43,060 | INFO     | job summary report
[2025-06-03 23:40:40] 2025-06-03 20:32:43,060 | INFO     | --------------------------------------------------
[2025-06-03 23:40:40] 2025-06-03 20:32:43,060 | INFO     | PanDA job id: 6677469133
[2025-06-03 23:40:40] 2025-06-03 20:32:43,060 | INFO     | task id: 45006595
[2025-06-03 23:40:40] 2025-06-03 20:32:43,060 | INFO     | errors: (none)
[2025-06-03 23:40:40] 2025-06-03 20:32:43,060 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:40:40] 2025-06-03 20:32:43,060 | INFO     | pilot state: finished 
[2025-06-03 23:40:40] 2025-06-03 20:32:43,060 | INFO     | transexitcode: 0
[2025-06-03 23:40:40] 2025-06-03 20:32:43,060 | INFO     | exeerrorcode: 0
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | exeerrordiag: 
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | exitcode: 0
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | exitmsg: OK
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | cpuconsumptiontime: 49803 s
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | nevents: 400
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | neventsw: 0
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | pid: 27580
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | pgrp: 27580
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | corecount: 8
[2025-06-03 23:40:40] 2025-06-03 20:32:43,061 | INFO     | event service: False
[2025-06-03 23:40:40] 2025-06-03 20:32:43,062 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 34: 2405266, 44: 2405294, 55: 2405450, 62: 2405684, 66: 2405712, 13368: 2435460, 13372: 2444401, 13374: 2
[2025-06-03 23:40:40] 2025-06-03 20:32:43,062 | INFO     | --------------------------------------------------
[2025-06-03 23:40:40] 2025-06-03 20:32:43,062 | INFO     | 
[2025-06-03 23:40:40] 2025-06-03 20:32:43,062 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 23:40:40] 2025-06-03 20:32:43,503 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,505 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:40:40] 2025-06-03 20:32:43,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,505 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:40:40] 2025-06-03 20:32:43,505 | INFO     | job 6677469133 has completed (purged errors)
[2025-06-03 23:40:40] 2025-06-03 20:32:43,505 | INFO     | overall cleanup function is called
[2025-06-03 23:40:40] 2025-06-03 20:32:44,514 | INFO     | --- collectZombieJob: --- 10, [27580]
[2025-06-03 23:40:40] 2025-06-03 20:32:44,515 | INFO     | zombie collector waiting for pid 27580
[2025-06-03 23:40:40] 2025-06-03 20:32:44,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:40:40] 2025-06-03 20:32:44,515 | INFO     | collected zombie processes
[2025-06-03 23:40:40] 2025-06-03 20:32:44,515 | INFO     | will attempt to kill all subprocesses of pid=27580
[2025-06-03 23:40:40] 2025-06-03 20:32:44,659 | INFO     | process IDs to be killed: [27580] (in reverse order)
[2025-06-03 23:40:40] 2025-06-03 20:32:45,297 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:40:40] 2025-06-03 20:32:45,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:40:40] 2025-06-03 20:32:45,301 | INFO     | did not find any defunct processes belonging to 27580
[2025-06-03 23:40:40] 2025-06-03 20:32:45,303 | INFO     | did not find any defunct processes belonging to 27580
[2025-06-03 23:40:40] 2025-06-03 20:32:45,304 | INFO     | ready for new job
[2025-06-03 23:40:40] 2025-06-03 20:32:45,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:40:40] 2025-06-03 20:32:45,306 | INFO     | **************************************
[2025-06-03 23:40:40] 2025-06-03 20:32:45,306 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:40:40] 2025-06-03 20:32:45,306 | INFO     | **************************************
[2025-06-03 23:40:40] 2025-06-03 20:32:45,306 | INFO     | 
[2025-06-03 23:40:40] 2025-06-03 20:32:45,307 | INFO     | pilot is running in a VM
[2025-06-03 23:40:40] 2025-06-03 20:32:45,307 | INFO     | architecture information:
[2025-06-03 23:40:40] 2025-06-03 20:32:45,325 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:40:40] 2025-06-03 20:32:45,783 | INFO     | cat /etc/os-release:
[2025-06-03 23:40:40] NAME="CentOS Linux"
[2025-06-03 23:40:40] VERSION="7 (Core)"
[2025-06-03 23:40:40] ID="centos"
[2025-06-03 23:40:40] ID_LIKE="rhel fedora"
[2025-06-03 23:40:40] VERSION_ID="7"
[2025-06-03 23:40:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:40:40] ANSI_COLOR="0;31"
[2025-06-03 23:40:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:40:40] HOME_URL="https://www.centos.org/"
[2025-06-03 23:40:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:40:40] 
[2025-06-03 23:40:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:40:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:40:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:40:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:40:40] 
[2025-06-03 23:40:40] 2025-06-03 20:32:45,783 | INFO     | **************************************
[2025-06-03 23:40:40] 2025-06-03 20:32:46,288 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 23:40:40] 2025-06-03 20:32:46,613 | INFO     | sufficient remaining disk space (496915972096 B)
[2025-06-03 23:40:40] 2025-06-03 20:32:46,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:40:40] 2025-06-03 20:32:46,614 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:40:40] 2025-06-03 20:32:46,614 | INFO     | update_server=False
[2025-06-03 23:40:40] 2025-06-03 20:32:46,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:40:40] 2025-06-03 20:32:46,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:40:40] 2025-06-03 20:32:46,715 | INFO     | all job control threads have been joined
[2025-06-03 23:40:40] 2025-06-03 20:32:46,773 | INFO     | all data control threads have been joined
[2025-06-03 23:40:40] 2025-06-03 20:32:47,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:40:40] 2025-06-03 20:32:47,178 | INFO     | aborting loop
[2025-06-03 23:40:40] 2025-06-03 20:32:47,438 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:40:40] 2025-06-03 20:32:47,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:40:40] 2025-06-03 20:32:47,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:40:40] 2025-06-03 20:32:47,486 | INFO     | all payload control threads have been joined
[2025-06-03 23:40:40] 2025-06-03 20:32:47,619 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:47,641 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:47,721 | INFO     | [job] control thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:47,746 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:47,767 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:47,778 | INFO     | [data] control thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:47,828 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:47,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:48,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:40:40] 2025-06-03 20:32:48,183 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:48,492 | INFO     | [payload] control thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:48,620 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:48,850 | INFO     | [job] validate thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:49,082 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:49,091 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:49,092 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:49,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:40:40] 2025-06-03 20:32:53,566 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:40:40] 2025-06-03 20:32:54,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687662204736)>', '<ExcThread(monitor, started 139687217846016)>']
[2025-06-03 23:40:40] 2025-06-03 20:32:55,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:40:40] 2025-06-03 20:32:55,488 | INFO     | [monitor] control thread has ended
[2025-06-03 23:40:40] 2025-06-03 20:32:59,587 | INFO     | all workflow threads have been joined
[2025-06-03 23:40:40] 2025-06-03 20:32:59,588 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:40:40] 2025-06-03 20:32:59,588 | INFO     | traces error code: 0
[2025-06-03 23:40:40] 2025-06-03 20:32:59,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:40:40] 2025-06-03 20:33:00,025 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:40:40] 2025-06-03 20:33:00,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:40:40] 2025-06-03 20:33:00,159 [wrapper] pilotpid: 20358
[2025-06-03 23:40:40] 2025-06-03 20:33:00,237 [wrapper] Pilot exit status: 0
[2025-06-03 23:40:40] 2025-06-03 20:33:00,661 [wrapper] pandaids: 6677469133
[2025-06-03 23:40:40] 2025-06-03 20:33:01,563 [wrapper] cleanup supervisor_pilot 24425 20359
[2025-06-03 23:40:40] 2025-06-03 20:33:01,666 [wrapper] Test setup, not cleaning
[2025-06-03 23:40:40] 2025-06-03 20:33:01,725 [wrapper] apfmon messages muted
[2025-06-03 23:40:40] 2025-06-03 20:33:01,778 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:40:40] 2025-06-03 20:33:01,859 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:40:40]  *** Error codes and diagnostics ***
[2025-06-03 23:40:40]     "exeErrorCode": 0,
[2025-06-03 23:40:40]     "exeErrorDiag": "",
[2025-06-03 23:40:40]     "pilotErrorCode": 0,
[2025-06-03 23:40:40]     "pilotErrorDiag": "",
[2025-06-03 23:40:40]  *** Listing of results directory ***
[2025-06-03 23:40:40] total 389348
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc    495897 Jun  3 06:37 pilot3.tar.gz
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc      5111 Jun  3 06:51 queuedata.json
[2025-06-03 23:40:40] -rwx------. 1 boinc boinc     37140 Jun  3 06:51 runpilot2-wrapper.sh
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc       100 Jun  3 18:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:40:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 18:45 run_atlas
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc       105 Jun  3 18:45 job.xml
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc      6392 Jun  3 18:45 init_data.xml
[2025-06-03 23:40:40] -rw-r--r--. 2 boinc boinc 214032449 Jun  3 18:45 EVNT.45006593._000797.pool.root.1
[2025-06-03 23:40:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:45 start_atlas.sh
[2025-06-03 23:40:40] drwxrwx--x. 2 boinc boinc        68 Jun  3 18:45 shared
[2025-06-03 23:40:40] -rw-r--r--. 2 boinc boinc    508880 Jun  3 18:45 input.tar.gz
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc         0 Jun  3 18:45 boinc_lockfile
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc      2524 Jun  3 18:45 pandaJob.out
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc    983734 Jun  3 18:45 agis_schedconf.cvmfs.json
[2025-06-03 23:40:40] drwx------. 4 boinc boinc      4096 Jun  3 18:45 pilot3
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc 177699269 Jun  3 22:30 HITS.45006595._019925.pool.root.1
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc       531 Jun  3 22:30 boinc_task_state.xml
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc      1017 Jun  3 22:31 memory_monitor_summary.json
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc   1603667 Jun  3 22:31 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc    390290 Jun  3 22:31 log.45006595._019925.job.log.tgz.1
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc        95 Jun  3 22:32 pilot_heartbeat.json
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc      7692 Jun  3 22:32 heartbeat.json
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc      4416 Jun  3 22:32 pilotlog.txt
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc   1177318 Jun  3 22:33 log.45006595._019925.job.log.1
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc       357 Jun  3 22:33 output.list
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc       620 Jun  3 22:33 runtime_log
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc   1587200 Jun  3 22:33 result.tar.gz
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc      8659 Jun  3 22:33 runtime_log.err
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc       656 Jun  3 22:33 KG0LDmrnYg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPPXKDmJWGd8n.diag
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:40 boinc_mmap_file
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc        28 Jun  3 23:40 wrapper_checkpoint.txt
[2025-06-03 23:40:40] -rw-r--r--. 1 boinc boinc     20530 Jun  3 23:40 stderr.txt
[2025-06-03 23:40:40] HITS file was successfully produced:
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc 177699269 Jun  3 22:30 shared/HITS.pool.root.1
[2025-06-03 23:40:40]  *** Contents of shared directory: ***
[2025-06-03 23:40:40] total 384624
[2025-06-03 23:40:40] -rw-r--r--. 2 boinc boinc 214032449 Jun  3 18:45 ATLAS.root_0
[2025-06-03 23:40:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:45 start_atlas.sh
[2025-06-03 23:40:40] -rw-r--r--. 2 boinc boinc    508880 Jun  3 18:45 input.tar.gz
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc 177699269 Jun  3 22:30 HITS.pool.root.1
[2025-06-03 23:40:40] -rw-------. 1 boinc boinc   1587200 Jun  3 22:33 result.tar.gz
23:40:42 (10586): run_atlas exited; CPU time 49983.534435
23:40:42 (10586): called boinc_finish(0)

</stderr_txt>
]]>

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