Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:49:31 (4676): wrapper (7.7.26015): starting
16:49:31 (4676): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:49:31] Arguments: --nthreads 8
[2025-06-03 16:49:31] Threads: 8
[2025-06-03 16:49:31] Checking for CVMFS
[2025-06-03 16:49:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:49:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:49:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:49:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:49:32] 2.11.2.0 31978 32021 89356 146743 0 60 21943246 25165824 4635 130560 0 16847173 99.820 18137974 2461 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 16:49:32] CVMFS is ok
[2025-06-03 16:49:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:49:32] Checking for apptainer binary...
[2025-06-03 16:49:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:49:32] Running /usr/bin/apptainer --version
[2025-06-03 16:49:33] apptainer version 1.3.2-1.el7
[2025-06-03 16:49:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:49:42] cg-vwn266.simple-grid.lan
[2025-06-03 16:49:42] apptainer works
[2025-06-03 16:49:42] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:49:42] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:49:42] Starting ATLAS job with PandaID=6677457543
[2025-06-03 16:49:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:31:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:31:16] 2025-06-03 18:44:30,277 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6677457543/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:31:16] 2025-06-03 18:44:30,278 | INFO     | extracted standard info from prmon json
[2025-06-03 23:31:16] 2025-06-03 18:44:30,278 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:31:16] 2025-06-03 18:44:30,278 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:31:16] 2025-06-03 18:44:30,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:31:16] 2025-06-03 18:44:30,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:31:16] 2025-06-03 18:44:30,284 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:31:16] 2025-06-03 18:44:30,285 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,287 | INFO     | sum of deviations: 12197464931.500008
[2025-06-03 23:31:16] 2025-06-03 18:44:30,287 | INFO     | mean x: 1748969461.5
[2025-06-03 23:31:16] 2025-06-03 18:44:30,287 | INFO     | mean y: 2467023.6227272726
[2025-06-03 23:31:16] 2025-06-03 18:44:30,287 | INFO     | -- intersect: -6458749740.797886
[2025-06-03 23:31:16] 2025-06-03 18:44:30,287 | INFO     | intersect: -6458749740.797886
[2025-06-03 23:31:16] 2025-06-03 18:44:30,288 | INFO     | chi2: 2.466518214203006
[2025-06-03 23:31:16] 2025-06-03 18:44:30,288 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,290 | INFO     | sum of deviations: 26253249784.000004
[2025-06-03 23:31:16] 2025-06-03 18:44:30,290 | INFO     | mean x: 1748969309.0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,290 | INFO     | mean y: 2476579.8418604652
[2025-06-03 23:31:16] 2025-06-03 18:44:30,290 | INFO     | -- intersect: -14897337549.982409
[2025-06-03 23:31:16] 2025-06-03 18:44:30,290 | INFO     | intersect: -14897337549.982409
[2025-06-03 23:31:16] 2025-06-03 18:44:30,291 | INFO     | chi2: 1.6974635637326232
[2025-06-03 23:31:16] 2025-06-03 18:44:30,291 | INFO     | current chi2=1.6974635637326232 (change=31.179767740692878 %)
[2025-06-03 23:31:16] 2025-06-03 18:44:30,291 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 23:31:16] 2025-06-03 18:44:30,293 | INFO     | sum of deviations: 25552858276.0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,293 | INFO     | mean x: 1748969156.5
[2025-06-03 23:31:16] 2025-06-03 18:44:30,293 | INFO     | mean y: 2476071.238095238
[2025-06-03 23:31:16] 2025-06-03 18:44:30,293 | INFO     | -- intersect: -15560590557.970032
[2025-06-03 23:31:16] 2025-06-03 18:44:30,294 | INFO     | intersect: -15560590557.970032
[2025-06-03 23:31:16] 2025-06-03 18:44:30,294 | INFO     | chi2: 1.6986236289270065
[2025-06-03 23:31:16] 2025-06-03 18:44:30,294 | INFO     | current chi2=1.6986236289270065 (change=-0.06834109545375805 %)
[2025-06-03 23:31:16] 2025-06-03 18:44:30,294 | INFO     | right removable region: 209
[2025-06-03 23:31:16] 2025-06-03 18:44:30,295 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,297 | INFO     | sum of deviations: -24620016996.000008
[2025-06-03 23:31:16] 2025-06-03 18:44:30,297 | INFO     | mean x: 1748969614.0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,297 | INFO     | mean y: 2492309.6883720933
[2025-06-03 23:31:16] 2025-06-03 18:44:30,297 | INFO     | -- intersect: 13975381155.953312
[2025-06-03 23:31:16] 2025-06-03 18:44:30,297 | INFO     | intersect: 13975381155.953312
[2025-06-03 23:31:16] 2025-06-03 18:44:30,297 | INFO     | chi2: 0.8916744179224486
[2025-06-03 23:31:16] 2025-06-03 18:44:30,298 | INFO     | current chi2=0.8916744179224486 (change=63.84886141168955 %)
[2025-06-03 23:31:16] 2025-06-03 18:44:30,298 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 23:31:16] 2025-06-03 18:44:30,300 | INFO     | sum of deviations: -21576241131.0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,300 | INFO     | mean x: 1748969766.5
[2025-06-03 23:31:16] 2025-06-03 18:44:30,300 | INFO     | mean y: 2490060.495238095
[2025-06-03 23:31:16] 2025-06-03 18:44:30,300 | INFO     | -- intersect: 13143587303.681221
[2025-06-03 23:31:16] 2025-06-03 18:44:30,300 | INFO     | intersect: 13143587303.681221
[2025-06-03 23:31:16] 2025-06-03 18:44:30,301 | INFO     | chi2: 0.8737974965974215
[2025-06-03 23:31:16] 2025-06-03 18:44:30,301 | INFO     | current chi2=0.8737974965974215 (change=2.004870944562858 %)
[2025-06-03 23:31:16] 2025-06-03 18:44:30,301 | INFO     | left removable region: 20
[2025-06-03 23:31:16] 2025-06-03 18:44:30,302 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,303 | INFO     | sum of deviations: 5260016275.000002
[2025-06-03 23:31:16] 2025-06-03 18:44:30,303 | INFO     | mean x: 1748969736.0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,303 | INFO     | mean y: 2489827.037037037
[2025-06-03 23:31:16] 2025-06-03 18:44:30,303 | INFO     | -- intersect: -4392093504.244587
[2025-06-03 23:31:16] 2025-06-03 18:44:30,303 | INFO     | intersect: -4392093504.244587
[2025-06-03 23:31:16] 2025-06-03 18:44:30,304 | INFO     | chi2: 0.0005565687383148903
[2025-06-03 23:31:16] 2025-06-03 18:44:30,304 | INFO     | -- intersect: -4392093504.244587
[2025-06-03 23:31:16] 2025-06-03 18:44:30,304 | INFO     | current memory leak: 2.51 B/s (using 189 data points, chi2=0.00)
[2025-06-03 23:31:16] 2025-06-03 18:44:30,305 | INFO     | ..............................
[2025-06-03 23:31:16] 2025-06-03 18:44:30,305 | INFO     | . Timing measurements:
[2025-06-03 23:31:16] 2025-06-03 18:44:30,305 | INFO     | . get job = 0 s
[2025-06-03 23:31:16] 2025-06-03 18:44:30,305 | INFO     | . initial setup = 6 s
[2025-06-03 23:31:16] 2025-06-03 18:44:30,306 | INFO     | . payload setup = 180 s
[2025-06-03 23:31:16] 2025-06-03 18:44:30,306 | INFO     | . stage-in = 0 s
[2025-06-03 23:31:16] 2025-06-03 18:44:30,306 | INFO     | . payload execution = 13420 s
[2025-06-03 23:31:16] 2025-06-03 18:44:30,306 | INFO     | . stage-out = 3 s
[2025-06-03 23:31:16] 2025-06-03 18:44:30,306 | INFO     | . log creation = 1 s
[2025-06-03 23:31:16] 2025-06-03 18:44:30,306 | INFO     | ..............................
[2025-06-03 23:31:16] 2025-06-03 18:44:30,478 | INFO     | 
[2025-06-03 23:31:16] 2025-06-03 18:44:30,478 | INFO     | job summary report
[2025-06-03 23:31:16] 2025-06-03 18:44:30,478 | INFO     | --------------------------------------------------
[2025-06-03 23:31:16] 2025-06-03 18:44:30,478 | INFO     | PanDA job id: 6677457543
[2025-06-03 23:31:16] 2025-06-03 18:44:30,478 | INFO     | task id: 45006595
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | errors: (none)
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | pilot state: finished 
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | transexitcode: 0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | exeerrorcode: 0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | exeerrordiag: 
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | exitcode: 0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | exitmsg: OK
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | cpuconsumptiontime: 49160 s
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | nevents: 400
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | neventsw: 0
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | pid: 16155
[2025-06-03 23:31:16] 2025-06-03 18:44:30,479 | INFO     | pgrp: 16155
[2025-06-03 23:31:16] 2025-06-03 18:44:30,480 | INFO     | corecount: 8
[2025-06-03 23:31:16] 2025-06-03 18:44:30,480 | INFO     | event service: False
[2025-06-03 23:31:16] 2025-06-03 18:44:30,480 | INFO     | sizes: {0: 2404955, 1: 2405210, 12: 2405210, 23: 2405238, 34: 2405266, 44: 2405294, 55: 2405450, 66: 2405478, 77: 2405506, 88: 2405562, 92: 2405796, 98: 2406104, 1
[2025-06-03 23:31:16] 2025-06-03 18:44:30,480 | INFO     | --------------------------------------------------
[2025-06-03 23:31:16] 2025-06-03 18:44:30,480 | INFO     | 
[2025-06-03 23:31:16] 2025-06-03 18:44:30,480 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 23:31:16] 2025-06-03 18:44:31,000 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,000 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,000 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,001 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:31:16] 2025-06-03 18:44:31,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:31:16] 2025-06-03 18:44:31,003 | INFO     | job 6677457543 has completed (purged errors)
[2025-06-03 23:31:16] 2025-06-03 18:44:31,003 | INFO     | overall cleanup function is called
[2025-06-03 23:31:16] 2025-06-03 18:44:32,012 | INFO     | --- collectZombieJob: --- 10, [16155]
[2025-06-03 23:31:16] 2025-06-03 18:44:32,012 | INFO     | zombie collector waiting for pid 16155
[2025-06-03 23:31:16] 2025-06-03 18:44:32,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:31:16] 2025-06-03 18:44:32,013 | INFO     | collected zombie processes
[2025-06-03 23:31:16] 2025-06-03 18:44:32,013 | INFO     | will attempt to kill all subprocesses of pid=16155
[2025-06-03 23:31:16] 2025-06-03 18:44:32,156 | INFO     | process IDs to be killed: [16155] (in reverse order)
[2025-06-03 23:31:16] 2025-06-03 18:44:32,702 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:31:16] 2025-06-03 18:44:32,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:31:16] 2025-06-03 18:44:32,706 | INFO     | did not find any defunct processes belonging to 16155
[2025-06-03 23:31:16] 2025-06-03 18:44:32,716 | INFO     | did not find any defunct processes belonging to 16155
[2025-06-03 23:31:16] 2025-06-03 18:44:32,717 | INFO     | ready for new job
[2025-06-03 23:31:16] 2025-06-03 18:44:32,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:31:16] 2025-06-03 18:44:32,719 | INFO     | **************************************
[2025-06-03 23:31:16] 2025-06-03 18:44:32,719 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:31:16] 2025-06-03 18:44:32,719 | INFO     | **************************************
[2025-06-03 23:31:16] 2025-06-03 18:44:32,719 | INFO     | 
[2025-06-03 23:31:16] 2025-06-03 18:44:32,720 | INFO     | pilot is running in a VM
[2025-06-03 23:31:16] 2025-06-03 18:44:32,720 | INFO     | architecture information:
[2025-06-03 23:31:16] 2025-06-03 18:44:32,734 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:31:16] 2025-06-03 18:44:33,038 | INFO     | cat /etc/os-release:
[2025-06-03 23:31:16] NAME="CentOS Linux"
[2025-06-03 23:31:16] VERSION="7 (Core)"
[2025-06-03 23:31:16] ID="centos"
[2025-06-03 23:31:16] ID_LIKE="rhel fedora"
[2025-06-03 23:31:16] VERSION_ID="7"
[2025-06-03 23:31:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:31:16] ANSI_COLOR="0;31"
[2025-06-03 23:31:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:31:16] HOME_URL="https://www.centos.org/"
[2025-06-03 23:31:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:31:16] 
[2025-06-03 23:31:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:31:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:31:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:31:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:31:16] 
[2025-06-03 23:31:16] 2025-06-03 18:44:33,038 | INFO     | **************************************
[2025-06-03 23:31:16] 2025-06-03 18:44:33,542 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 23:31:16] 2025-06-03 18:44:33,808 | INFO     | sufficient remaining disk space (497107861504 B)
[2025-06-03 23:31:16] 2025-06-03 18:44:33,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:31:16] 2025-06-03 18:44:33,809 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:31:16] 2025-06-03 18:44:33,809 | INFO     | update_server=False
[2025-06-03 23:31:16] 2025-06-03 18:44:33,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:31:16] 2025-06-03 18:44:33,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:31:16] 2025-06-03 18:44:33,810 | INFO     | aborting loop
[2025-06-03 23:31:16] 2025-06-03 18:44:33,817 | INFO     | all payload control threads have been joined
[2025-06-03 23:31:16] 2025-06-03 18:44:34,208 | INFO     | all job control threads have been joined
[2025-06-03 23:31:16] 2025-06-03 18:44:34,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:31:16] 2025-06-03 18:44:34,665 | INFO     | all data control threads have been joined
[2025-06-03 23:31:16] 2025-06-03 18:44:34,754 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:31:16] 2025-06-03 18:44:34,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:31:16] 2025-06-03 18:44:34,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:31:16] 2025-06-03 18:44:34,814 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:34,815 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:34,823 | INFO     | [payload] control thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:34,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:31:16] 2025-06-03 18:44:34,996 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:35,214 | INFO     | [job] control thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:35,233 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:35,337 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:35,492 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:35,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:31:16] 2025-06-03 18:44:35,594 | INFO     | [job] validate thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:35,671 | INFO     | [data] control thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:36,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:36,268 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:36,385 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:36,502 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:36,893 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:38,294 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:31:16] 2025-06-03 18:44:39,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840566593344)>', '<ExcThread(monitor, started 139840267986688)>']
[2025-06-03 23:31:16] 2025-06-03 18:44:39,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:31:16] 2025-06-03 18:44:39,784 | INFO     | [monitor] control thread has ended
[2025-06-03 23:31:16] 2025-06-03 18:44:44,393 | INFO     | all workflow threads have been joined
[2025-06-03 23:31:16] 2025-06-03 18:44:44,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:31:16] 2025-06-03 18:44:44,394 | INFO     | traces error code: 0
[2025-06-03 23:31:16] 2025-06-03 18:44:44,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:31:16] 2025-06-03 18:44:44,768 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:31:16] 2025-06-03 18:44:44,802 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:31:16] 2025-06-03 18:44:44,834 [wrapper] pilotpid: 9549
[2025-06-03 23:31:16] 2025-06-03 18:44:45,002 [wrapper] Pilot exit status: 0
[2025-06-03 23:31:16] 2025-06-03 18:44:45,166 [wrapper] pandaids: 6677457543
[2025-06-03 23:31:16] 2025-06-03 18:44:46,289 [wrapper] cleanup supervisor_pilot 20951 9550
[2025-06-03 23:31:16] 2025-06-03 18:44:46,351 [wrapper] Test setup, not cleaning
[2025-06-03 23:31:16] 2025-06-03 18:44:46,529 [wrapper] apfmon messages muted
[2025-06-03 23:31:16] 2025-06-03 18:44:46,598 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:31:16] 2025-06-03 18:44:46,704 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:31:16]  *** Error codes and diagnostics ***
[2025-06-03 23:31:16]     "exeErrorCode": 0,
[2025-06-03 23:31:16]     "exeErrorDiag": "",
[2025-06-03 23:31:16]     "pilotErrorCode": 0,
[2025-06-03 23:31:16]     "pilotErrorDiag": "",
[2025-06-03 23:31:16]  *** Listing of results directory ***
[2025-06-03 23:31:16] total 385092
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc    495897 Jun  3 06:08 pilot3.tar.gz
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc      5111 Jun  3 06:14 queuedata.json
[2025-06-03 23:31:16] -rwx------. 1 boinc boinc     37140 Jun  3 06:15 runpilot2-wrapper.sh
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:31:16] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:49 run_atlas
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:49 job.xml
[2025-06-03 23:31:16] -rw-r--r--. 2 boinc boinc 214740969 Jun  3 16:49 EVNT.45006593._000770.pool.root.1
[2025-06-03 23:31:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:49 start_atlas.sh
[2025-06-03 23:31:16] drwxrwx--x. 2 boinc boinc        68 Jun  3 16:49 shared
[2025-06-03 23:31:16] -rw-r--r--. 2 boinc boinc    508877 Jun  3 16:49 input.tar.gz
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc      6391 Jun  3 16:49 init_data.xml
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:49 boinc_lockfile
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc      2524 Jun  3 16:49 pandaJob.out
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc    982724 Jun  3 16:52 agis_schedconf.cvmfs.json
[2025-06-03 23:31:16] drwx------. 4 boinc boinc      4096 Jun  3 16:52 pilot3
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc 172637326 Jun  3 20:41 HITS.45006595._019238.pool.root.1
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:41 boinc_task_state.xml
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc      1034 Jun  3 20:42 memory_monitor_summary.json
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc   1603667 Jun  3 20:42 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc    380021 Jun  3 20:42 log.45006595._019238.job.log.tgz.1
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc        95 Jun  3 20:44 pilot_heartbeat.json
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc      7688 Jun  3 20:44 heartbeat.json
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc      4416 Jun  3 20:44 pilotlog.txt
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc   1191671 Jun  3 20:44 log.45006595._019238.job.log.1
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc       357 Jun  3 20:44 output.list
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:44 runtime_log
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc   1587200 Jun  3 20:44 result.tar.gz
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc       656 Jun  3 20:44 UdJNDmNEYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWvhKDmhwcAen.diag
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc      8659 Jun  3 20:44 runtime_log.err
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:31 boinc_mmap_file
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc        28 Jun  3 23:31 wrapper_checkpoint.txt
[2025-06-03 23:31:16] -rw-r--r--. 1 boinc boinc     20538 Jun  3 23:31 stderr.txt
[2025-06-03 23:31:16] HITS file was successfully produced:
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc 172637326 Jun  3 20:41 shared/HITS.pool.root.1
[2025-06-03 23:31:16]  *** Contents of shared directory: ***
[2025-06-03 23:31:16] total 380368
[2025-06-03 23:31:16] -rw-r--r--. 2 boinc boinc 214740969 Jun  3 16:49 ATLAS.root_0
[2025-06-03 23:31:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:49 start_atlas.sh
[2025-06-03 23:31:16] -rw-r--r--. 2 boinc boinc    508877 Jun  3 16:49 input.tar.gz
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc 172637326 Jun  3 20:41 HITS.pool.root.1
[2025-06-03 23:31:16] -rw-------. 1 boinc boinc   1587200 Jun  3 20:44 result.tar.gz
23:31:18 (4676): run_atlas exited; CPU time 49348.646214
23:31:18 (4676): called boinc_finish(0)

</stderr_txt>
]]>

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