Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:34:21 (1319100): wrapper (7.7.26015): starting
03:34:21 (1319100): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:34:21] Arguments: --nthreads 8
[2025-06-03 03:34:21] Threads: 8
[2025-06-03 03:34:21] Checking for CVMFS
[2025-06-03 03:34:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:34:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:34:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:34:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:34:22] 2.12.6.0 3036893 21566 431840 146734 0 290 32828288 32935937 10715 16776704 0 106507318 99.638 95999934 24439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 03:34:22] CVMFS is ok
[2025-06-03 03:34:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:34:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:34:22] Further information can be found at the LHC@home message board.
[2025-06-03 03:34:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:34:22] Checking for apptainer binary...
[2025-06-03 03:34:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:34:22] Running /usr/bin/apptainer --version
[2025-06-03 03:34:22] apptainer version 1.4.1-1.el9
[2025-06-03 03:34:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:34:22] c6-12-29-4.aglt2.org
[2025-06-03 03:34:22] apptainer works
[2025-06-03 03:34:22] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:34:22] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:34:22] Starting ATLAS job with PandaID=6677469042
[2025-06-03 03:34:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:03:49]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:03:49]  guid=bfbbcaa8-04b4-4e78-9303-8a56176b5bb6
[2025-06-03 05:03:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 05:03:49]  is_altstaged=None
[2025-06-03 05:03:49]  is_tar=False
[2025-06-03 05:03:49]  lfn=log.45006595._019834.job.log.tgz.1
[2025-06-03 05:03:49]  mtime=0
[2025-06-03 05:03:49]  protocol_id=None
[2025-06-03 05:03:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 05:03:49]  replicas=None
[2025-06-03 05:03:49]  scope=mc23_13p6TeV
[2025-06-03 05:03:49]  status=None
[2025-06-03 05:03:49]  status_code=0
[2025-06-03 05:03:49]  storage_token=
[2025-06-03 05:03:49]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677469042/log.45006595._019834.job.log.tgz.1
[2025-06-03 05:03:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/3a/log.45006595._019834.job.log.tgz.1
[2025-06-03 05:03:49]  workdir=None
[2025-06-03 05:03:49] ]
[2025-06-03 05:03:49] 2025-06-03 09:03:26,096 | INFO     | transferring file log.45006595._019834.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677469042/log.45006595._019834.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 05:03:49] 2025-06-03 09:03:26,096 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677469042/log.45006595._019834.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._019834.job
[2025-06-03 05:03:49] 2025-06-03 09:03:26,115 | INFO     | adding to output.list: log.45006595._019834.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/3a/log.45006595._019834.job.log.tg
[2025-06-03 05:03:49] 2025-06-03 09:03:26,116 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 05:03:49] 2025-06-03 09:03:26,116 | INFO     | summary of transferred files:
[2025-06-03 05:03:49] 2025-06-03 09:03:26,116 | INFO     |  -- lfn=log.45006595._019834.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 05:03:49] 2025-06-03 09:03:26,116 | INFO     | stage-out finished correctly
[2025-06-03 05:03:49] 2025-06-03 09:03:26,216 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 05:03:49] 2025-06-03 09:03:26,312 | INFO     | job 6677469042 has state=finished
[2025-06-03 05:03:49] 2025-06-03 09:03:26,312 | INFO     | preparing for final server update for job 6677469042 in state='finished'
[2025-06-03 05:03:49] 2025-06-03 09:03:26,313 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:03:49] 2025-06-03 09:03:26,313 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:03:49] 2025-06-03 09:03:26,313 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:03:49] 2025-06-03 09:03:26,313 | INFO     | job 6677469042 has finished - writing final server update
[2025-06-03 05:03:49] 2025-06-03 09:03:26,313 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:03:49] 2025-06-03 09:03:26,331 | INFO     | executing command: lscpu
[2025-06-03 05:03:49] 2025-06-03 09:03:26,423 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:03:49] 2025-06-03 09:03:27,358 | INFO     | monitor loop #380: job 0:6677469042 is in state 'finished'
[2025-06-03 05:03:49] 2025-06-03 09:03:27,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:03:49] 2025-06-03 09:03:29,862 | INFO     | monitor loop #381: job 0:6677469042 is in state 'finished'
[2025-06-03 05:03:49] 2025-06-03 09:03:29,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:03:49] 2025-06-03 09:03:30,125 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 05:03:49] 2025-06-03 09:03:30,125 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677469042/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:03:49] 2025-06-03 09:03:30,126 | INFO     | extracted standard info from prmon json
[2025-06-03 05:03:49] 2025-06-03 09:03:30,126 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:03:49] 2025-06-03 09:03:30,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:03:49] 2025-06-03 09:03:30,126 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:03:49] 2025-06-03 09:03:30,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:03:49] 2025-06-03 09:03:30,129 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:03:49] 2025-06-03 09:03:30,129 | INFO     | sum of square deviations: 158737860.0
[2025-06-03 05:03:49] 2025-06-03 09:03:30,130 | INFO     | sum of deviations: 10828514430.0
[2025-06-03 05:03:49] 2025-06-03 09:03:30,130 | INFO     | mean x: 1748938810.5
[2025-06-03 05:03:49] 2025-06-03 09:03:30,130 | INFO     | mean y: 2112649.625
[2025-06-03 05:03:49] 2025-06-03 09:03:30,130 | INFO     | -- intersect: -119304076476.81458
[2025-06-03 05:03:49] 2025-06-03 09:03:30,130 | INFO     | intersect: -119304076476.81458
[2025-06-03 05:03:49] 2025-06-03 09:03:30,130 | INFO     | chi2: 0.984094394320224
[2025-06-03 05:03:49] 2025-06-03 09:03:30,130 | INFO     | -- intersect: -119304076476.81458
[2025-06-03 05:03:49] 2025-06-03 09:03:30,130 | INFO     | current memory leak: 68.22 B/s (using 80 data points, chi2=0.98)
[2025-06-03 05:03:49] 2025-06-03 09:03:30,131 | INFO     | ..............................
[2025-06-03 05:03:49] 2025-06-03 09:03:30,131 | INFO     | . Timing measurements:
[2025-06-03 05:03:49] 2025-06-03 09:03:30,131 | INFO     | . get job = 0 s
[2025-06-03 05:03:49] 2025-06-03 09:03:30,131 | INFO     | . initial setup = 4 s
[2025-06-03 05:03:49] 2025-06-03 09:03:30,131 | INFO     | . payload setup = 4 s
[2025-06-03 05:03:49] 2025-06-03 09:03:30,131 | INFO     | . stage-in = 0 s
[2025-06-03 05:03:49] 2025-06-03 09:03:30,131 | INFO     | . payload execution = 5308 s
[2025-06-03 05:03:49] 2025-06-03 09:03:30,132 | INFO     | . stage-out = 0 s
[2025-06-03 05:03:49] 2025-06-03 09:03:30,132 | INFO     | . log creation = 0 s
[2025-06-03 05:03:49] 2025-06-03 09:03:30,132 | INFO     | ..............................
[2025-06-03 05:03:49] 2025-06-03 09:03:30,230 | INFO     | 
[2025-06-03 05:03:49] 2025-06-03 09:03:30,230 | INFO     | job summary report
[2025-06-03 05:03:49] 2025-06-03 09:03:30,230 | INFO     | --------------------------------------------------
[2025-06-03 05:03:49] 2025-06-03 09:03:30,230 | INFO     | PanDA job id: 6677469042
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | task id: 45006595
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | errors: (none)
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | pilot state: finished 
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | transexitcode: 0
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | exeerrorcode: 0
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | exeerrordiag: 
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | exitcode: 0
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | exitmsg: OK
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | cpuconsumptiontime: 34395 s
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | nevents: 400
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | neventsw: 0
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | pid: 1335545
[2025-06-03 05:03:49] 2025-06-03 09:03:30,231 | INFO     | pgrp: 1335545
[2025-06-03 05:03:49] 2025-06-03 09:03:30,232 | INFO     | corecount: 8
[2025-06-03 05:03:49] 2025-06-03 09:03:30,232 | INFO     | event service: False
[2025-06-03 05:03:49] 2025-06-03 09:03:30,232 | INFO     | sizes: {0: 2405182, 4: 2405388, 11: 2405416, 5317: 2431908, 5318: 2440905, 5322: 2441019}
[2025-06-03 05:03:49] 2025-06-03 09:03:30,232 | INFO     | --------------------------------------------------
[2025-06-03 05:03:49] 2025-06-03 09:03:30,232 | INFO     | 
[2025-06-03 05:03:49] 2025-06-03 09:03:30,232 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 05:03:49] 2025-06-03 09:03:30,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:03:49] 2025-06-03 09:03:30,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:03:49] 2025-06-03 09:03:30,253 | INFO     | job 6677469042 has completed (purged errors)
[2025-06-03 05:03:49] 2025-06-03 09:03:30,253 | INFO     | overall cleanup function is called
[2025-06-03 05:03:49] 2025-06-03 09:03:31,260 | INFO     | --- collectZombieJob: --- 10, [1335545]
[2025-06-03 05:03:49] 2025-06-03 09:03:31,261 | INFO     | zombie collector waiting for pid 1335545
[2025-06-03 05:03:49] 2025-06-03 09:03:31,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:03:49] 2025-06-03 09:03:31,261 | INFO     | collected zombie processes
[2025-06-03 05:03:49] 2025-06-03 09:03:31,261 | INFO     | will attempt to kill all subprocesses of pid=1335545
[2025-06-03 05:03:49] 2025-06-03 09:03:31,615 | INFO     | process IDs to be killed: [1335545] (in reverse order)
[2025-06-03 05:03:49] 2025-06-03 09:03:31,724 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:03:49] 2025-06-03 09:03:31,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:03:49] 2025-06-03 09:03:31,737 | INFO     | did not find any defunct processes belonging to 1335545
[2025-06-03 05:03:49] 2025-06-03 09:03:31,750 | INFO     | did not find any defunct processes belonging to 1335545
[2025-06-03 05:03:49] 2025-06-03 09:03:31,750 | INFO     | ready for new job
[2025-06-03 05:03:49] 2025-06-03 09:03:31,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:03:49] 2025-06-03 09:03:31,752 | INFO     | **************************************
[2025-06-03 05:03:49] 2025-06-03 09:03:31,753 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:03:49] 2025-06-03 09:03:31,753 | INFO     | **************************************
[2025-06-03 05:03:49] 2025-06-03 09:03:31,753 | INFO     | 
[2025-06-03 05:03:49] 2025-06-03 09:03:31,770 | INFO     | architecture information:
[2025-06-03 05:03:49] 2025-06-03 09:03:31,771 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:03:49] 2025-06-03 09:03:31,787 | INFO     | cat /etc/os-release:
[2025-06-03 05:03:49] NAME="CentOS Linux"
[2025-06-03 05:03:49] VERSION="7 (Core)"
[2025-06-03 05:03:49] ID="centos"
[2025-06-03 05:03:49] ID_LIKE="rhel fedora"
[2025-06-03 05:03:49] VERSION_ID="7"
[2025-06-03 05:03:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:03:49] ANSI_COLOR="0;31"
[2025-06-03 05:03:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:03:49] HOME_URL="https://www.centos.org/"
[2025-06-03 05:03:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:03:49] 
[2025-06-03 05:03:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:03:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:03:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:03:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:03:49] 
[2025-06-03 05:03:49] 2025-06-03 09:03:31,787 | INFO     | **************************************
[2025-06-03 05:03:49] 2025-06-03 09:03:32,290 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 05:03:49] 2025-06-03 09:03:32,308 | INFO     | sufficient remaining disk space (90409271296 B)
[2025-06-03 05:03:49] 2025-06-03 09:03:32,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:03:49] 2025-06-03 09:03:32,309 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:03:49] 2025-06-03 09:03:32,309 | INFO     | update_server=False
[2025-06-03 05:03:49] 2025-06-03 09:03:32,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:03:49] 2025-06-03 09:03:32,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:03:49] 2025-06-03 09:03:32,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:03:49] 2025-06-03 09:03:32,365 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 05:03:49] 2025-06-03 09:03:32,365 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 05:03:49] 2025-06-03 09:03:32,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:03:49] 2025-06-03 09:03:32,365 | INFO     | will abort loop
[2025-06-03 05:03:49] 2025-06-03 09:03:32,909 | INFO     | all data control threads have been joined
[2025-06-03 05:03:49] 2025-06-03 09:03:32,942 | INFO     | all payload control threads have been joined
[2025-06-03 05:03:49] 2025-06-03 09:03:33,241 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:03:49] 2025-06-03 09:03:33,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:03:49] 2025-06-03 09:03:33,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:03:49] 2025-06-03 09:03:33,315 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:33,371 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:33,595 | INFO     | [job] validate thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:33,670 | INFO     | all job control threads have been joined
[2025-06-03 05:03:49] 2025-06-03 09:03:33,720 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:33,814 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:33,914 | INFO     | [data] control thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:33,947 | INFO     | [payload] control thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:34,200 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:34,315 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:34,521 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:34,676 | INFO     | [job] control thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:34,776 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:34,830 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:35,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:03:49] 2025-06-03 09:03:36,246 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:36,323 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:42,477 | INFO     | job.realtimelogging is not enabled
[2025-06-03 05:03:49] 2025-06-03 09:03:43,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:03:49] 2025-06-03 09:03:44,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490035726144)>', '<ExcThread(monitor, started 140489672070912)>']
[2025-06-03 05:03:49] 2025-06-03 09:03:45,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:03:49] 2025-06-03 09:03:45,301 | INFO     | [monitor] control thread has ended
[2025-06-03 05:03:49] 2025-06-03 09:03:49,374 | INFO     | all workflow threads have been joined
[2025-06-03 05:03:49] 2025-06-03 09:03:49,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:03:49] 2025-06-03 09:03:49,374 | INFO     | traces error code: 0
[2025-06-03 05:03:49] 2025-06-03 09:03:49,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:03:49] 2025-06-03 09:03:49,517 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:03:49] 2025-06-03 09:03:49,519 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:03:49] 2025-06-03 09:03:49,520 [wrapper] pilotpid: 1323048
[2025-06-03 05:03:49] 2025-06-03 09:03:49,522 [wrapper] Pilot exit status: 0
[2025-06-03 05:03:49] 2025-06-03 09:03:49,528 [wrapper] pandaids: 6677469042
[2025-06-03 05:03:49] 2025-06-03 09:03:49,571 [wrapper] cleanup supervisor_pilot 1684046 1323049
[2025-06-03 05:03:49] 2025-06-03 09:03:49,573 [wrapper] Test setup, not cleaning
[2025-06-03 05:03:49] 2025-06-03 09:03:49,575 [wrapper] apfmon messages muted
[2025-06-03 05:03:49] 2025-06-03 09:03:49,577 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:03:49] 2025-06-03 09:03:49,579 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:03:49]  *** Error codes and diagnostics ***
[2025-06-03 05:03:49]     "exeErrorCode": 0,
[2025-06-03 05:03:49]     "exeErrorDiag": "",
[2025-06-03 05:03:49]     "pilotErrorCode": 0,
[2025-06-03 05:03:49]     "pilotErrorDiag": "",
[2025-06-03 05:03:49]  *** Listing of results directory ***
[2025-06-03 05:03:49] total 394788
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 00:37 pilot3.tar.gz
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 00:49 queuedata.json
[2025-06-03 05:03:49] -rwx------. 1 boincer umatlas     37140 Jun  3 00:50 runpilot2-wrapper.sh
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas       100 Jun  3 03:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:03:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 03:34 run_atlas
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas       105 Jun  3 03:34 job.xml
[2025-06-03 05:03:49] -rw-r--r--. 2 boincer umatlas 217515665 Jun  3 03:34 EVNT.45006593._000794.pool.root.1
[2025-06-03 05:03:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:34 start_atlas.sh
[2025-06-03 05:03:49] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 03:34 shared
[2025-06-03 05:03:49] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 03:34 input.tar.gz
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas         0 Jun  3 03:34 boinc_lockfile
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 03:34 pandaJob.out
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas    985499 Jun  3 03:34 agis_schedconf.cvmfs.json
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas   1603667 Jun  3 03:34 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:03:49] drwx------. 4 boincer umatlas      4096 Jun  3 03:34 pilot3
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas      6860 Jun  3 05:02 init_data.xml
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas 181283299 Jun  3 05:02 HITS.45006595._019834.pool.root.1
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas       529 Jun  3 05:02 boinc_task_state.xml
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas        95 Jun  3 05:03 pilot_heartbeat.json
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas      1036 Jun  3 05:03 memory_monitor_summary.json
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas    301130 Jun  3 05:03 log.45006595._019834.job.log.tgz.1
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas      7716 Jun  3 05:03 heartbeat.json
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas        27 Jun  3 05:03 wrapper_checkpoint.txt
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 05:03 boinc_mmap_file
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas      4611 Jun  3 05:03 pilotlog.txt
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas    512253 Jun  3 05:03 log.45006595._019834.job.log.1
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas       357 Jun  3 05:03 output.list
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas       620 Jun  3 05:03 runtime_log
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas    829440 Jun  3 05:03 result.tar.gz
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas      8669 Jun  3 05:03 runtime_log.err
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas       654 Jun  3 05:03 DwKKDmOmYg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhOXKDmm3kean.diag
[2025-06-03 05:03:49] -rw-r--r--. 1 boincer umatlas     21238 Jun  3 05:03 stderr.txt
[2025-06-03 05:03:49] HITS file was successfully produced:
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas 181283299 Jun  3 05:02 shared/HITS.pool.root.1
[2025-06-03 05:03:49]  *** Contents of shared directory: ***
[2025-06-03 05:03:49] total 390792
[2025-06-03 05:03:49] -rw-r--r--. 2 boincer umatlas 217515665 Jun  3 03:34 ATLAS.root_0
[2025-06-03 05:03:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:34 start_atlas.sh
[2025-06-03 05:03:49] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 03:34 input.tar.gz
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas 181283299 Jun  3 05:02 HITS.pool.root.1
[2025-06-03 05:03:49] -rw-------. 1 boincer umatlas    829440 Jun  3 05:03 result.tar.gz
05:03:51 (1319100): run_atlas exited; CPU time 34605.083888
05:03:51 (1319100): called boinc_finish(0)

</stderr_txt>
]]>

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