Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:34:34 (32720): wrapper (7.7.26015): starting
16:34:34 (32720): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:34:34] Arguments: --nthreads 8
[2025-06-03 16:34:34] Threads: 8
[2025-06-03 16:34:34] Checking for CVMFS
[2025-06-03 16:34:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:34:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:34:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:34:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:34:35] 2.11.2.0 19466 31894 91256 146743 1 207 24938522 25165825 4641 130560 0 16320987 99.839 17559532 1977 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 16:34:35] CVMFS is ok
[2025-06-03 16:34:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:34:36] Checking for apptainer binary...
[2025-06-03 16:34:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:34:36] Running /usr/bin/apptainer --version
[2025-06-03 16:34:36] apptainer version 1.3.2-1.el7
[2025-06-03 16:34:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:42:52] cg-vwn426.simple-grid.lan
[2025-06-03 16:42:52] apptainer works
[2025-06-03 16:42:52] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:42:52] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:42:52] Starting ATLAS job with PandaID=6677458175
[2025-06-03 16:42:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:26:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:26:36] 2025-06-03 18:49:54,111 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:26:36] 2025-06-03 18:49:54,111 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:26:36] 2025-06-03 18:49:54,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:26:36] 2025-06-03 18:49:54,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:26:36] 2025-06-03 18:49:54,117 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:26:36] 2025-06-03 18:49:54,117 | INFO     | sum of square deviations: 3772712597.5
[2025-06-03 21:26:36] 2025-06-03 18:49:54,119 | INFO     | sum of deviations: 87532993984.5
[2025-06-03 21:26:36] 2025-06-03 18:49:54,120 | INFO     | mean x: 1748969475.5
[2025-06-03 21:26:36] 2025-06-03 18:49:54,120 | INFO     | mean y: 2423629.8391304347
[2025-06-03 21:26:36] 2025-06-03 18:49:54,120 | INFO     | -- intersect: -40576478319.7721
[2025-06-03 21:26:36] 2025-06-03 18:49:54,120 | INFO     | intersect: -40576478319.7721
[2025-06-03 21:26:36] 2025-06-03 18:49:54,120 | INFO     | chi2: 7.153355665049543
[2025-06-03 21:26:36] 2025-06-03 18:49:54,121 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,123 | INFO     | sum of deviations: 100540522019.0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,123 | INFO     | mean x: 1748969323.0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,123 | INFO     | mean y: 2431699.5377777778
[2025-06-03 21:26:36] 2025-06-03 18:49:54,123 | INFO     | -- intersect: -49783418524.2513
[2025-06-03 21:26:36] 2025-06-03 18:49:54,123 | INFO     | intersect: -49783418524.2513
[2025-06-03 21:26:36] 2025-06-03 18:49:54,124 | INFO     | chi2: 6.4459331826218005
[2025-06-03 21:26:36] 2025-06-03 18:49:54,124 | INFO     | current chi2=6.4459331826218005 (change=9.889379412296325 %)
[2025-06-03 21:26:36] 2025-06-03 18:49:54,124 | INFO     | right removable region: 224
[2025-06-03 21:26:36] 2025-06-03 18:49:54,125 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,126 | INFO     | sum of deviations: 8463764579.000002
[2025-06-03 21:26:36] 2025-06-03 18:49:54,127 | INFO     | mean x: 1748969628.0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,127 | INFO     | mean y: 2473675.3066666666
[2025-06-03 21:26:36] 2025-06-03 18:49:54,127 | INFO     | -- intersect: -4188630375.8829656
[2025-06-03 21:26:36] 2025-06-03 18:49:54,127 | INFO     | intersect: -4188630375.8829656
[2025-06-03 21:26:36] 2025-06-03 18:49:54,127 | INFO     | chi2: 2.300236138140681
[2025-06-03 21:26:36] 2025-06-03 18:49:54,128 | INFO     | current chi2=2.300236138140681 (change=67.84395679667703 %)
[2025-06-03 21:26:36] 2025-06-03 18:49:54,128 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,130 | INFO     | sum of deviations: -30265309972.499996
[2025-06-03 21:26:36] 2025-06-03 18:49:54,130 | INFO     | mean x: 1748969780.5
[2025-06-03 21:26:36] 2025-06-03 18:49:54,130 | INFO     | mean y: 2499161.1954545453
[2025-06-03 21:26:36] 2025-06-03 18:49:54,130 | INFO     | -- intersect: 16034581642.269073
[2025-06-03 21:26:36] 2025-06-03 18:49:54,130 | INFO     | intersect: 16034581642.269073
[2025-06-03 21:26:36] 2025-06-03 18:49:54,131 | INFO     | chi2: 0.9179363704904119
[2025-06-03 21:26:36] 2025-06-03 18:49:54,131 | INFO     | current chi2=0.9179363704904119 (change=60.09382014003158 %)
[2025-06-03 21:26:36] 2025-06-03 18:49:54,132 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,133 | INFO     | sum of deviations: -26193029363.999996
[2025-06-03 21:26:36] 2025-06-03 18:49:54,133 | INFO     | mean x: 1748969933.0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,134 | INFO     | mean y: 2496304.074418605
[2025-06-03 21:26:36] 2025-06-03 18:49:54,134 | INFO     | -- intersect: 14868138137.874054
[2025-06-03 21:26:36] 2025-06-03 18:49:54,134 | INFO     | intersect: 14868138137.874054
[2025-06-03 21:26:36] 2025-06-03 18:49:54,134 | INFO     | chi2: 0.8964060847385915
[2025-06-03 21:26:36] 2025-06-03 18:49:54,134 | INFO     | current chi2=0.8964060847385915 (change=2.3455096065447005 %)
[2025-06-03 21:26:36] 2025-06-03 18:49:54,134 | INFO     | left removable region: 30
[2025-06-03 21:26:36] 2025-06-03 18:49:54,135 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 21:26:36] 2025-06-03 18:49:54,136 | INFO     | sum of deviations: 4750522223.5
[2025-06-03 21:26:36] 2025-06-03 18:49:54,136 | INFO     | mean x: 1748970207.5
[2025-06-03 21:26:36] 2025-06-03 18:49:54,136 | INFO     | mean y: 2493748.3041237113
[2025-06-03 21:26:36] 2025-06-03 18:49:54,137 | INFO     | -- intersect: -3667384796.7224116
[2025-06-03 21:26:36] 2025-06-03 18:49:54,137 | INFO     | intersect: -3667384796.7224116
[2025-06-03 21:26:36] 2025-06-03 18:49:54,137 | INFO     | chi2: 0.0005966620525562738
[2025-06-03 21:26:36] 2025-06-03 18:49:54,137 | INFO     | -- intersect: -3667384796.7224116
[2025-06-03 21:26:36] 2025-06-03 18:49:54,137 | INFO     | current memory leak: 2.10 B/s (using 194 data points, chi2=0.00)
[2025-06-03 21:26:36] 2025-06-03 18:49:54,138 | INFO     | ..............................
[2025-06-03 21:26:36] 2025-06-03 18:49:54,138 | INFO     | . Timing measurements:
[2025-06-03 21:26:36] 2025-06-03 18:49:54,138 | INFO     | . get job = 0 s
[2025-06-03 21:26:36] 2025-06-03 18:49:54,139 | INFO     | . initial setup = 10 s
[2025-06-03 21:26:36] 2025-06-03 18:49:54,139 | INFO     | . payload setup = 163 s
[2025-06-03 21:26:36] 2025-06-03 18:49:54,139 | INFO     | . stage-in = 0 s
[2025-06-03 21:26:36] 2025-06-03 18:49:54,139 | INFO     | . payload execution = 14169 s
[2025-06-03 21:26:36] 2025-06-03 18:49:54,139 | INFO     | . stage-out = 2 s
[2025-06-03 21:26:36] 2025-06-03 18:49:54,139 | INFO     | . log creation = 1 s
[2025-06-03 21:26:36] 2025-06-03 18:49:54,139 | INFO     | ..............................
[2025-06-03 21:26:36] 2025-06-03 18:49:54,320 | INFO     | 
[2025-06-03 21:26:36] 2025-06-03 18:49:54,320 | INFO     | job summary report
[2025-06-03 21:26:36] 2025-06-03 18:49:54,320 | INFO     | --------------------------------------------------
[2025-06-03 21:26:36] 2025-06-03 18:49:54,320 | INFO     | PanDA job id: 6677458175
[2025-06-03 21:26:36] 2025-06-03 18:49:54,320 | INFO     | task id: 45006595
[2025-06-03 21:26:36] 2025-06-03 18:49:54,320 | INFO     | errors: (none)
[2025-06-03 21:26:36] 2025-06-03 18:49:54,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | pilot state: finished 
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | transexitcode: 0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | exeerrorcode: 0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | exeerrordiag: 
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | exitcode: 0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | exitmsg: OK
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | cpuconsumptiontime: 50886 s
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | nevents: 400
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | neventsw: 0
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | pid: 21247
[2025-06-03 21:26:36] 2025-06-03 18:49:54,321 | INFO     | pgrp: 21247
[2025-06-03 21:26:36] 2025-06-03 18:49:54,322 | INFO     | corecount: 8
[2025-06-03 21:26:36] 2025-06-03 18:49:54,322 | INFO     | event service: False
[2025-06-03 21:26:36] 2025-06-03 18:49:54,322 | INFO     | sizes: {0: 2404303, 1: 2404988, 2: 2405187, 13: 2405187, 23: 2405243, 34: 2405271, 45: 2405427, 56: 2405455, 66: 2405483, 77: 2405511, 88: 2405567, 93: 2406081, 98
[2025-06-03 21:26:36] 2025-06-03 18:49:54,322 | INFO     | --------------------------------------------------
[2025-06-03 21:26:36] 2025-06-03 18:49:54,322 | INFO     | 
[2025-06-03 21:26:36] 2025-06-03 18:49:54,322 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-03 21:26:36] 2025-06-03 18:49:54,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,682 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,682 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,682 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,683 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,683 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,683 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,684 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:26:36] 2025-06-03 18:49:54,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,684 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:26:36] 2025-06-03 18:49:54,684 | INFO     | job 6677458175 has completed (purged errors)
[2025-06-03 21:26:36] 2025-06-03 18:49:54,684 | INFO     | overall cleanup function is called
[2025-06-03 21:26:36] 2025-06-03 18:49:55,693 | INFO     | --- collectZombieJob: --- 10, [21247]
[2025-06-03 21:26:36] 2025-06-03 18:49:55,694 | INFO     | zombie collector waiting for pid 21247
[2025-06-03 21:26:36] 2025-06-03 18:49:55,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:26:36] 2025-06-03 18:49:55,694 | INFO     | collected zombie processes
[2025-06-03 21:26:36] 2025-06-03 18:49:55,694 | INFO     | will attempt to kill all subprocesses of pid=21247
[2025-06-03 21:26:36] 2025-06-03 18:49:55,800 | INFO     | process IDs to be killed: [21247] (in reverse order)
[2025-06-03 21:26:36] 2025-06-03 18:49:56,601 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:26:36] 2025-06-03 18:49:56,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:26:36] 2025-06-03 18:49:56,605 | INFO     | did not find any defunct processes belonging to 21247
[2025-06-03 21:26:36] 2025-06-03 18:49:56,609 | INFO     | did not find any defunct processes belonging to 21247
[2025-06-03 21:26:36] 2025-06-03 18:49:56,609 | INFO     | ready for new job
[2025-06-03 21:26:36] 2025-06-03 18:49:56,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:26:36] 2025-06-03 18:49:56,614 | INFO     | **************************************
[2025-06-03 21:26:36] 2025-06-03 18:49:56,615 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:26:36] 2025-06-03 18:49:56,615 | INFO     | **************************************
[2025-06-03 21:26:36] 2025-06-03 18:49:56,615 | INFO     | 
[2025-06-03 21:26:36] 2025-06-03 18:49:56,616 | INFO     | pilot is running in a VM
[2025-06-03 21:26:36] 2025-06-03 18:49:56,616 | INFO     | architecture information:
[2025-06-03 21:26:36] 2025-06-03 18:49:56,631 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:26:36] 2025-06-03 18:49:56,886 | INFO     | cat /etc/os-release:
[2025-06-03 21:26:36] NAME="CentOS Linux"
[2025-06-03 21:26:36] VERSION="7 (Core)"
[2025-06-03 21:26:36] ID="centos"
[2025-06-03 21:26:36] ID_LIKE="rhel fedora"
[2025-06-03 21:26:36] VERSION_ID="7"
[2025-06-03 21:26:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:26:36] ANSI_COLOR="0;31"
[2025-06-03 21:26:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:26:36] HOME_URL="https://www.centos.org/"
[2025-06-03 21:26:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:26:36] 
[2025-06-03 21:26:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:26:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:26:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:26:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:26:36] 
[2025-06-03 21:26:36] 2025-06-03 18:49:56,887 | INFO     | **************************************
[2025-06-03 21:26:36] 2025-06-03 18:49:57,391 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-03 21:26:36] 2025-06-03 18:49:57,589 | INFO     | sufficient remaining disk space (496860397568 B)
[2025-06-03 21:26:36] 2025-06-03 18:49:57,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:26:36] 2025-06-03 18:49:57,590 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:26:36] 2025-06-03 18:49:57,590 | INFO     | update_server=False
[2025-06-03 21:26:36] 2025-06-03 18:49:57,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:26:36] 2025-06-03 18:49:57,590 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:26:36] 2025-06-03 18:49:57,591 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:26:36] 2025-06-03 18:49:57,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:26:36] 2025-06-03 18:49:57,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:26:36] 2025-06-03 18:49:57,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:26:36] 2025-06-03 18:49:57,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:26:36] 2025-06-03 18:49:57,724 | INFO     | all job control threads have been joined
[2025-06-03 21:26:36] 2025-06-03 18:49:57,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:26:36] 2025-06-03 18:49:57,759 | INFO     | aborting loop
[2025-06-03 21:26:36] 2025-06-03 18:49:57,839 | INFO     | all payload control threads have been joined
[2025-06-03 21:26:36] 2025-06-03 18:49:58,114 | INFO     | all data control threads have been joined
[2025-06-03 21:26:36] 2025-06-03 18:49:58,596 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:58,730 | INFO     | [job] control thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:58,765 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:58,844 | INFO     | [payload] control thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:58,886 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:58,968 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:58,986 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:59,120 | INFO     | [data] control thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:59,129 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:59,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:26:36] 2025-06-03 18:49:59,316 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:59,388 | INFO     | [job] validate thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:49:59,599 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:50:00,071 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:50:00,293 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:50:01,604 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:50:07,758 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:26:36] 2025-06-03 18:50:08,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:26:36] 2025-06-03 18:50:10,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714559756096)>', '<ExcThread(monitor, started 140713589204736)>']
[2025-06-03 21:26:36] 2025-06-03 18:50:10,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:26:36] 2025-06-03 18:50:10,667 | INFO     | [monitor] control thread has ended
[2025-06-03 21:26:36] 2025-06-03 18:50:15,332 | INFO     | all workflow threads have been joined
[2025-06-03 21:26:36] 2025-06-03 18:50:15,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:26:36] 2025-06-03 18:50:15,333 | INFO     | traces error code: 0
[2025-06-03 21:26:36] 2025-06-03 18:50:15,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:26:36] 2025-06-03 18:50:15,657 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:26:36] 2025-06-03 18:50:15,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:26:36] 2025-06-03 18:50:15,848 [wrapper] pilotpid: 14630
[2025-06-03 21:26:36] 2025-06-03 18:50:15,905 [wrapper] Pilot exit status: 0
[2025-06-03 21:26:36] 2025-06-03 18:50:16,282 [wrapper] pandaids: 6677458175
[2025-06-03 21:26:36] 2025-06-03 18:50:17,228 [wrapper] cleanup supervisor_pilot 31000 14631
[2025-06-03 21:26:36] 2025-06-03 18:50:17,308 [wrapper] Test setup, not cleaning
[2025-06-03 21:26:36] 2025-06-03 18:50:17,396 [wrapper] apfmon messages muted
[2025-06-03 21:26:36] 2025-06-03 18:50:17,491 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:26:36] 2025-06-03 18:50:17,603 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:26:36]  *** Error codes and diagnostics ***
[2025-06-03 21:26:36]     "exeErrorCode": 0,
[2025-06-03 21:26:36]     "exeErrorDiag": "",
[2025-06-03 21:26:36]     "pilotErrorCode": 0,
[2025-06-03 21:26:36]     "pilotErrorDiag": "",
[2025-06-03 21:26:36]  *** Listing of results directory ***
[2025-06-03 21:26:36] total 393760
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc    495897 Jun  3 06:08 pilot3.tar.gz
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc      5111 Jun  3 06:30 queuedata.json
[2025-06-03 21:26:36] -rwx------. 1 boinc boinc     37140 Jun  3 06:31 runpilot2-wrapper.sh
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:26:36] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:34 run_atlas
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:34 job.xml
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc      6391 Jun  3 16:34 init_data.xml
[2025-06-03 21:26:36] -rw-r--r--. 2 boinc boinc 214441065 Jun  3 16:34 EVNT.45006593._000782.pool.root.1
[2025-06-03 21:26:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:34 start_atlas.sh
[2025-06-03 21:26:36] drwxrwx--x. 2 boinc boinc        68 Jun  3 16:34 shared
[2025-06-03 21:26:36] -rw-r--r--. 2 boinc boinc    508883 Jun  3 16:34 input.tar.gz
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:34 boinc_lockfile
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc      2523 Jun  3 16:42 pandaJob.out
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc    982724 Jun  3 16:46 agis_schedconf.cvmfs.json
[2025-06-03 21:26:36] drwx------. 4 boinc boinc      4096 Jun  3 16:46 pilot3
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc 181710432 Jun  3 20:47 HITS.45006595._019534.pool.root.1
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:47 boinc_task_state.xml
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc      1018 Jun  3 20:48 memory_monitor_summary.json
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc   1603667 Jun  3 20:48 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc    379477 Jun  3 20:48 log.45006595._019534.job.log.tgz.1
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc        95 Jun  3 20:49 pilot_heartbeat.json
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc      7694 Jun  3 20:49 heartbeat.json
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc      4611 Jun  3 20:50 pilotlog.txt
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc   1243247 Jun  3 20:50 log.45006595._019534.job.log.1
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc       357 Jun  3 20:50 output.list
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:50 runtime_log
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc   1638400 Jun  3 20:50 result.tar.gz
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc      8659 Jun  3 20:50 runtime_log.err
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc       656 Jun  3 20:50 LSTMDmMUYg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtMXKDmJq2eFm.diag
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:26 boinc_mmap_file
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:26 wrapper_checkpoint.txt
[2025-06-03 21:26:36] -rw-r--r--. 1 boinc boinc     20511 Jun  3 21:26 stderr.txt
[2025-06-03 21:26:36] HITS file was successfully produced:
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc 181710432 Jun  3 20:47 shared/HITS.pool.root.1
[2025-06-03 21:26:36]  *** Contents of shared directory: ***
[2025-06-03 21:26:36] total 388984
[2025-06-03 21:26:36] -rw-r--r--. 2 boinc boinc 214441065 Jun  3 16:34 ATLAS.root_0
[2025-06-03 21:26:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:34 start_atlas.sh
[2025-06-03 21:26:36] -rw-r--r--. 2 boinc boinc    508883 Jun  3 16:34 input.tar.gz
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc 181710432 Jun  3 20:47 HITS.pool.root.1
[2025-06-03 21:26:36] -rw-------. 1 boinc boinc   1638400 Jun  3 20:50 result.tar.gz
21:26:38 (32720): run_atlas exited; CPU time 51092.987545
21:26:38 (32720): called boinc_finish(0)

</stderr_txt>
]]>

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