Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:46 (994869): wrapper (7.7.26015): starting
00:10:46 (994869): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 00:10:46] Arguments: --nthreads 4
[2025-06-05 00:10:46] Threads: 4
[2025-06-05 00:10:46] Checking for CVMFS
[2025-06-05 00:10:46] No cvmfs_config command found, will try listing directly
[2025-06-05 00:10:46] CVMFS is ok
[2025-06-05 00:10:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:10:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:10:46] Further information can be found at the LHC@home message board.
[2025-06-05 00:10:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:10:46] Checking for apptainer binary...
[2025-06-05 00:10:46] which: no apptainer in ((null))
[2025-06-05 00:10:46] apptainer is not installed, using version from CVMFS
[2025-06-05 00:10:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:10:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-05 00:10:46] apptainer works
[2025-06-05 00:10:46] Set ATHENA_PROC_NUMBER=4
[2025-06-05 00:10:46] Set ATHENA_CORE_NUMBER=4
[2025-06-05 00:10:46] Starting ATLAS job with PandaID=6677457568
[2025-06-05 00:10:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:54:20]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:54:20] 2025-06-05 00:53:49,053 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6677457568/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:54:20] 2025-06-05 00:53:49,054 | INFO     | extracted standard info from prmon json
[2025-06-05 02:54:20] 2025-06-05 00:53:49,054 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:54:20] 2025-06-05 00:53:49,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:54:20] 2025-06-05 00:53:49,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:54:20] 2025-06-05 00:53:49,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:54:20] 2025-06-05 00:53:49,059 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:54:20] 2025-06-05 00:53:49,060 | INFO     | sum of square deviations: 1270051720.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,061 | INFO     | sum of deviations: 11838783742.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,061 | INFO     | mean x: 1749079932.5
[2025-06-05 02:54:20] 2025-06-05 00:53:49,061 | INFO     | mean y: 2328154.25
[2025-06-05 02:54:20] 2025-06-05 00:53:49,061 | INFO     | -- intersect: -16301715801.014637
[2025-06-05 02:54:20] 2025-06-05 00:53:49,061 | INFO     | intersect: -16301715801.014637
[2025-06-05 02:54:20] 2025-06-05 00:53:49,062 | INFO     | chi2: 1.515796010636913
[2025-06-05 02:54:20] 2025-06-05 00:53:49,062 | INFO     | sum of square deviations: 1154663510.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,063 | INFO     | sum of deviations: 11582372682.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,063 | INFO     | mean x: 1749079780.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,063 | INFO     | mean y: 2327815.0387096773
[2025-06-05 02:54:20] 2025-06-05 00:53:49,063 | INFO     | -- intersect: -17542605134.743835
[2025-06-05 02:54:20] 2025-06-05 00:53:49,063 | INFO     | intersect: -17542605134.743835
[2025-06-05 02:54:20] 2025-06-05 00:53:49,064 | INFO     | chi2: 1.5173611188483924
[2025-06-05 02:54:20] 2025-06-05 00:53:49,064 | INFO     | current chi2=1.5173611188483924 (change=-0.10325322144249068 %)
[2025-06-05 02:54:20] 2025-06-05 00:53:49,064 | INFO     | right removable region: 154
[2025-06-05 02:54:20] 2025-06-05 00:53:49,064 | INFO     | sum of square deviations: 1154663510.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,065 | INFO     | sum of deviations: -11278861814.000002
[2025-06-05 02:54:20] 2025-06-05 00:53:49,065 | INFO     | mean x: 1749080085.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,065 | INFO     | mean y: 2358271.2322580647
[2025-06-05 02:54:20] 2025-06-05 00:53:49,065 | INFO     | -- intersect: 17087537121.592203
[2025-06-05 02:54:20] 2025-06-05 00:53:49,065 | INFO     | intersect: 17087537121.592203
[2025-06-05 02:54:20] 2025-06-05 00:53:49,066 | INFO     | chi2: 0.02283631414571898
[2025-06-05 02:54:20] 2025-06-05 00:53:49,066 | INFO     | current chi2=0.02283631414571898 (change=98.49344410557437 %)
[2025-06-05 02:54:20] 2025-06-05 00:53:49,066 | INFO     | sum of square deviations: 1046484737.5
[2025-06-05 02:54:20] 2025-06-05 00:53:49,067 | INFO     | sum of deviations: -11249665597.5
[2025-06-05 02:54:20] 2025-06-05 00:53:49,067 | INFO     | mean x: 1749080237.5
[2025-06-05 02:54:20] 2025-06-05 00:53:49,067 | INFO     | mean y: 2358189.5
[2025-06-05 02:54:20] 2025-06-05 00:53:49,067 | INFO     | -- intersect: 18804894977.640095
[2025-06-05 02:54:20] 2025-06-05 00:53:49,067 | INFO     | intersect: 18804894977.640095
[2025-06-05 02:54:20] 2025-06-05 00:53:49,068 | INFO     | chi2: 0.016236726282460888
[2025-06-05 02:54:20] 2025-06-05 00:53:49,068 | INFO     | current chi2=0.016236726282460888 (change=28.899531777089717 %)
[2025-06-05 02:54:20] 2025-06-05 00:53:49,068 | INFO     | sum of square deviations: 945282840.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,069 | INFO     | sum of deviations: -9515168875.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,069 | INFO     | mean x: 1749080390.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,069 | INFO     | mean y: 2355574.206896552
[2025-06-05 02:54:20] 2025-06-05 00:53:49,069 | INFO     | -- intersect: 17608509608.274483
[2025-06-05 02:54:20] 2025-06-05 00:53:49,069 | INFO     | intersect: 17608509608.274483
[2025-06-05 02:54:20] 2025-06-05 00:53:49,070 | INFO     | chi2: 0.01542958946127404
[2025-06-05 02:54:20] 2025-06-05 00:53:49,070 | INFO     | current chi2=0.01542958946127404 (change=4.971056401059903 %)
[2025-06-05 02:54:20] 2025-06-05 00:53:49,070 | INFO     | left removable region: 30
[2025-06-05 02:54:20] 2025-06-05 00:53:49,070 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,071 | INFO     | sum of deviations: -3734235566.5000005
[2025-06-05 02:54:20] 2025-06-05 00:53:49,071 | INFO     | mean x: 1749080664.5
[2025-06-05 02:54:20] 2025-06-05 00:53:49,071 | INFO     | mean y: 2346239.959677419
[2025-06-05 02:54:20] 2025-06-05 00:53:49,071 | INFO     | -- intersect: 11050668065.84103
[2025-06-05 02:54:20] 2025-06-05 00:53:49,071 | INFO     | intersect: 11050668065.84103
[2025-06-05 02:54:20] 2025-06-05 00:53:49,071 | INFO     | chi2: 0.005679085890732795
[2025-06-05 02:54:20] 2025-06-05 00:53:49,072 | INFO     | -- intersect: 11050668065.84103
[2025-06-05 02:54:20] 2025-06-05 00:53:49,072 | INFO     | current memory leak: -6.32 B/s (using 124 data points, chi2=0.01)
[2025-06-05 02:54:20] 2025-06-05 00:53:49,072 | INFO     | ..............................
[2025-06-05 02:54:20] 2025-06-05 00:53:49,072 | INFO     | . Timing measurements:
[2025-06-05 02:54:20] 2025-06-05 00:53:49,073 | INFO     | . get job = 0 s
[2025-06-05 02:54:20] 2025-06-05 00:53:49,073 | INFO     | . initial setup = 1 s
[2025-06-05 02:54:20] 2025-06-05 00:53:49,073 | INFO     | . payload setup = 7 s
[2025-06-05 02:54:20] 2025-06-05 00:53:49,073 | INFO     | . stage-in = 0 s
[2025-06-05 02:54:20] 2025-06-05 00:53:49,073 | INFO     | . payload execution = 9737 s
[2025-06-05 02:54:20] 2025-06-05 00:53:49,073 | INFO     | . stage-out = 0 s
[2025-06-05 02:54:20] 2025-06-05 00:53:49,073 | INFO     | . log creation = 0 s
[2025-06-05 02:54:20] 2025-06-05 00:53:49,073 | INFO     | ..............................
[2025-06-05 02:54:20] 2025-06-05 00:53:49,185 | INFO     | 
[2025-06-05 02:54:20] 2025-06-05 00:53:49,185 | INFO     | job summary report
[2025-06-05 02:54:20] 2025-06-05 00:53:49,185 | INFO     | --------------------------------------------------
[2025-06-05 02:54:20] 2025-06-05 00:53:49,185 | INFO     | PanDA job id: 6677457568
[2025-06-05 02:54:20] 2025-06-05 00:53:49,185 | INFO     | task id: 45006595
[2025-06-05 02:54:20] 2025-06-05 00:53:49,185 | INFO     | errors: (none)
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | pilot state: finished 
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | transexitcode: 0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | exeerrorcode: 0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | exeerrordiag: 
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | exitcode: 0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | exitmsg: OK
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | cpuconsumptiontime: 37184 s
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | nevents: 400
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | neventsw: 0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,186 | INFO     | pid: 1005658
[2025-06-05 02:54:20] 2025-06-05 00:53:49,187 | INFO     | pgrp: 1005658
[2025-06-05 02:54:20] 2025-06-05 00:53:49,187 | INFO     | corecount: 4
[2025-06-05 02:54:20] 2025-06-05 00:53:49,187 | INFO     | event service: False
[2025-06-05 02:54:20] 2025-06-05 00:53:49,187 | INFO     | sizes: {0: 2397351, 4: 2397557, 11: 2397585, 9748: 2425817, 9749: 2434780, 9751: 2434836, 9758: 2435134}
[2025-06-05 02:54:20] 2025-06-05 00:53:49,187 | INFO     | --------------------------------------------------
[2025-06-05 02:54:20] 2025-06-05 00:53:49,187 | INFO     | 
[2025-06-05 02:54:20] 2025-06-05 00:53:49,187 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-05 02:54:20] 2025-06-05 00:53:49,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,209 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,209 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:54:20] 2025-06-05 00:53:49,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:54:20] 2025-06-05 00:53:49,211 | INFO     | job 6677457568 has completed (purged errors)
[2025-06-05 02:54:20] 2025-06-05 00:53:49,211 | INFO     | overall cleanup function is called
[2025-06-05 02:54:20] 2025-06-05 00:53:50,216 | INFO     | --- collectZombieJob: --- 10, [1005658]
[2025-06-05 02:54:20] 2025-06-05 00:53:50,216 | INFO     | zombie collector waiting for pid 1005658
[2025-06-05 02:54:20] 2025-06-05 00:53:50,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:54:20] 2025-06-05 00:53:50,217 | INFO     | collected zombie processes
[2025-06-05 02:54:20] 2025-06-05 00:53:50,217 | INFO     | will attempt to kill all subprocesses of pid=1005658
[2025-06-05 02:54:20] 2025-06-05 00:53:50,582 | INFO     | process IDs to be killed: [1005658] (in reverse order)
[2025-06-05 02:54:20] 2025-06-05 00:53:50,693 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:54:20] 2025-06-05 00:53:50,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:54:20] 2025-06-05 00:53:50,705 | INFO     | did not find any defunct processes belonging to 1005658
[2025-06-05 02:54:20] 2025-06-05 00:53:50,717 | INFO     | did not find any defunct processes belonging to 1005658
[2025-06-05 02:54:20] 2025-06-05 00:53:50,717 | INFO     | ready for new job
[2025-06-05 02:54:20] 2025-06-05 00:53:50,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:54:20] 2025-06-05 00:53:50,719 | INFO     | **************************************
[2025-06-05 02:54:20] 2025-06-05 00:53:50,720 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:54:20] 2025-06-05 00:53:50,720 | INFO     | **************************************
[2025-06-05 02:54:20] 2025-06-05 00:53:50,720 | INFO     | 
[2025-06-05 02:54:20] 2025-06-05 00:53:50,724 | INFO     | architecture information:
[2025-06-05 02:54:20] 2025-06-05 00:53:50,724 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:54:20] 2025-06-05 00:53:50,739 | INFO     | cat /etc/os-release:
[2025-06-05 02:54:20] NAME="CentOS Linux"
[2025-06-05 02:54:20] VERSION="7 (Core)"
[2025-06-05 02:54:20] ID="centos"
[2025-06-05 02:54:20] ID_LIKE="rhel fedora"
[2025-06-05 02:54:20] VERSION_ID="7"
[2025-06-05 02:54:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:54:20] ANSI_COLOR="0;31"
[2025-06-05 02:54:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:54:20] HOME_URL="https://www.centos.org/"
[2025-06-05 02:54:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:54:20] 
[2025-06-05 02:54:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:54:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:54:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:54:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:54:20] 
[2025-06-05 02:54:20] 2025-06-05 00:53:50,740 | INFO     | **************************************
[2025-06-05 02:54:20] 2025-06-05 00:53:51,243 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-05 02:54:20] 2025-06-05 00:53:51,259 | INFO     | sufficient remaining disk space (661039087616 B)
[2025-06-05 02:54:20] 2025-06-05 00:53:51,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:54:20] 2025-06-05 00:53:51,260 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:54:20] 2025-06-05 00:53:51,260 | INFO     | update_server=False
[2025-06-05 02:54:20] 2025-06-05 00:53:51,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:54:20] 2025-06-05 00:53:51,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:54:20] 2025-06-05 00:53:51,261 | INFO     | aborting loop
[2025-06-05 02:54:20] 2025-06-05 00:53:51,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:54:20] 2025-06-05 00:53:51,301 | INFO     | all payload control threads have been joined
[2025-06-05 02:54:20] 2025-06-05 00:53:52,045 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:54:20] 2025-06-05 00:53:52,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:54:20] 2025-06-05 00:53:52,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:54:20] 2025-06-05 00:53:52,224 | INFO     | all data control threads have been joined
[2025-06-05 02:54:20] 2025-06-05 00:53:52,261 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:52,266 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:52,306 | INFO     | [payload] control thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:52,310 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:52,362 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:52,546 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:52,782 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:52,806 | INFO     | all job control threads have been joined
[2025-06-05 02:54:20] 2025-06-05 00:53:52,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:54:20] 2025-06-05 00:53:53,139 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:53,230 | INFO     | [data] control thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:53,266 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:53,330 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:53,663 | INFO     | [job] validate thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:53,811 | INFO     | [job] control thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:54,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:54:20] 2025-06-05 00:53:55,200 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:53:56,871 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:54:01,807 | INFO     | job.realtimelogging is not enabled
[2025-06-05 02:54:20] 2025-06-05 00:54:02,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:54:20] 2025-06-05 00:54:02,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23377090873152)>', '<ExcThread(monitor, started 23376852645632)>']
[2025-06-05 02:54:20] 2025-06-05 00:54:03,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:54:20] 2025-06-05 00:54:03,086 | INFO     | [monitor] control thread has ended
[2025-06-05 02:54:20] 2025-06-05 00:54:07,965 | INFO     | all workflow threads have been joined
[2025-06-05 02:54:20] 2025-06-05 00:54:07,966 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:54:20] 2025-06-05 00:54:07,966 | INFO     | traces error code: 0
[2025-06-05 02:54:20] 2025-06-05 00:54:07,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:54:20] 2025-06-05 00:54:08,133 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:54:20] 2025-06-05 00:54:08,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:54:20] 2025-06-05 00:54:08,139 [wrapper] pilotpid: 998573
[2025-06-05 02:54:20] 2025-06-05 00:54:08,142 [wrapper] Pilot exit status: 0
[2025-06-05 02:54:20] 2025-06-05 00:54:08,151 [wrapper] pandaids: 6677457568
[2025-06-05 02:54:20] 2025-06-05 00:54:08,200 [wrapper] cleanup supervisor_pilot 1315040 998574
[2025-06-05 02:54:20] 2025-06-05 00:54:08,202 [wrapper] Test setup, not cleaning
[2025-06-05 02:54:20] 2025-06-05 00:54:08,204 [wrapper] apfmon messages muted
[2025-06-05 02:54:20] 2025-06-05 00:54:08,206 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:54:20] 2025-06-05 00:54:08,208 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:54:20]  *** Error codes and diagnostics ***
[2025-06-05 02:54:20]     "exeErrorCode": 0,
[2025-06-05 02:54:20]     "exeErrorDiag": "",
[2025-06-05 02:54:20]     "pilotErrorCode": 0,
[2025-06-05 02:54:20]     "pilotErrorDiag": "",
[2025-06-05 02:54:20]  *** Listing of results directory ***
[2025-06-05 02:54:20] total 392692
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc    495897 Jun  3 06:08 pilot3.tar.gz
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc      5111 Jun  3 06:17 queuedata.json
[2025-06-05 02:54:20] -rwx------ 1 boinc boinc     37140 Jun  3 06:17 runpilot2-wrapper.sh
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc       100 Jun  5 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:54:20] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:10 run_atlas
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc       105 Jun  5 00:10 job.xml
[2025-06-05 02:54:20] -rw-r--r-- 2 boinc boinc 213838902 Jun  5 00:10 EVNT.45006593._000771.pool.root.1
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc      6635 Jun  5 00:10 init_data.xml
[2025-06-05 02:54:20] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:10 start_atlas.sh
[2025-06-05 02:54:20] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:10 shared
[2025-06-05 02:54:20] -rw-r--r-- 2 boinc boinc    508877 Jun  5 00:10 input.tar.gz
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc         0 Jun  5 00:10 boinc_lockfile
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc      2524 Jun  5 00:10 pandaJob.out
[2025-06-05 02:54:20] -rw------- 1 boinc boinc    987032 Jun  5 00:10 agis_schedconf.cvmfs.json
[2025-06-05 02:54:20] -rw------- 1 boinc boinc   1598969 Jun  5 00:10 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:54:20] drwx------ 4 boinc boinc      4096 Jun  5 00:10 pilot3
[2025-06-05 02:54:20] -rw------- 1 boinc boinc 182008488 Jun  5 02:53 HITS.45006595._019263.pool.root.1
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc       528 Jun  5 02:53 boinc_task_state.xml
[2025-06-05 02:54:20] -rw------- 1 boinc boinc      1033 Jun  5 02:53 memory_monitor_summary.json
[2025-06-05 02:54:20] -rw------- 1 boinc boinc        95 Jun  5 02:53 pilot_heartbeat.json
[2025-06-05 02:54:20] -rw------- 1 boinc boinc    290831 Jun  5 02:53 log.45006595._019263.job.log.tgz.1
[2025-06-05 02:54:20] -rw------- 1 boinc boinc      7723 Jun  5 02:53 heartbeat.json
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc        26 Jun  5 02:53 wrapper_checkpoint.txt
[2025-06-05 02:54:20] -rw------- 1 boinc boinc      4435 Jun  5 02:54 pilotlog.txt
[2025-06-05 02:54:20] -rw------- 1 boinc boinc    923905 Jun  5 02:54 log.45006595._019263.job.log.1
[2025-06-05 02:54:20] -rw------- 1 boinc boinc       357 Jun  5 02:54 output.list
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc       620 Jun  5 02:54 runtime_log
[2025-06-05 02:54:20] -rw------- 1 boinc boinc   1239040 Jun  5 02:54 result.tar.gz
[2025-06-05 02:54:20] -rw------- 1 boinc boinc       663 Jun  5 02:54 wPUMDmBHYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzvhKDmixsCIo.diag
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc      9025 Jun  5 02:54 runtime_log.err
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc      8192 Jun  5 02:54 boinc_mmap_file
[2025-06-05 02:54:20] -rw-r--r-- 1 boinc boinc     20574 Jun  5 02:54 stderr.txt
[2025-06-05 02:54:20] HITS file was successfully produced:
[2025-06-05 02:54:20] -rw------- 1 boinc boinc 182008488 Jun  5 02:53 shared/HITS.pool.root.1
[2025-06-05 02:54:20]  *** Contents of shared directory: ***
[2025-06-05 02:54:20] total 388308
[2025-06-05 02:54:20] -rw-r--r-- 2 boinc boinc 213838902 Jun  5 00:10 ATLAS.root_0
[2025-06-05 02:54:20] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:10 start_atlas.sh
[2025-06-05 02:54:20] -rw-r--r-- 2 boinc boinc    508877 Jun  5 00:10 input.tar.gz
[2025-06-05 02:54:20] -rw------- 1 boinc boinc 182008488 Jun  5 02:53 HITS.pool.root.1
[2025-06-05 02:54:20] -rw------- 1 boinc boinc   1239040 Jun  5 02:54 result.tar.gz
02:54:22 (994869): run_atlas exited; CPU time 37581.382349
02:54:22 (994869): called boinc_finish(0)

</stderr_txt>
]]>

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