Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:17:41 (4172087): wrapper (7.7.26015): starting
09:17:41 (4172087): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 09:17:41] Arguments: --nthreads 4
[2025-06-03 09:17:41] Threads: 4
[2025-06-03 09:17:41] Checking for CVMFS
[2025-06-03 09:17:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:17:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:17:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:17:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:17:41] 2.12.7.0 3701437 688 60776 146731 0 187 6985888 10240000 1822 130560 0 1305154 99.997 145850 526 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-06-03 09:17:41] CVMFS is ok
[2025-06-03 09:17:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:17:41] Checking for apptainer binary...
[2025-06-03 09:17:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:17:41] Running /usr/bin/apptainer --version
[2025-06-03 09:17:41] apptainer version 1.3.4
[2025-06-03 09:17:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:17:42] woolyvlneu
[2025-06-03 09:17:42] apptainer works
[2025-06-03 09:17:42] Set ATHENA_PROC_NUMBER=4
[2025-06-03 09:17:42] Set ATHENA_CORE_NUMBER=4
[2025-06-03 09:17:42] Starting ATLAS job with PandaID=6677444280
[2025-06-03 09:17:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:38:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:38:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 10:38:55]  replicas=None
[2025-06-03 10:38:55]  scope=mc23_13p6TeV
[2025-06-03 10:38:55]  status=None
[2025-06-03 10:38:55]  status_code=0
[2025-06-03 10:38:55]  storage_token=
[2025-06-03 10:38:55]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6677444280/log.45006595._017496.job.log.tgz.1
[2025-06-03 10:38:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/0a/log.45006595._017496.job.log.tgz.1
[2025-06-03 10:38:55]  workdir=None
[2025-06-03 10:38:55] ]
[2025-06-03 10:38:55] 2025-06-03 08:38:26,130 | INFO     | transferring file log.45006595._017496.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6677444280/log.45006595._017496.job.log.tgz.1 to /var/li
[2025-06-03 10:38:55] 2025-06-03 08:38:26,130 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6677444280/log.45006595._017496.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-06-03 10:38:55] 2025-06-03 08:38:26,145 | INFO     | adding to output.list: log.45006595._017496.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/0a/log.45006595._017496.job.log.tg
[2025-06-03 10:38:55] 2025-06-03 08:38:26,145 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 10:38:55] 2025-06-03 08:38:26,145 | INFO     | summary of transferred files:
[2025-06-03 10:38:55] 2025-06-03 08:38:26,145 | INFO     |  -- lfn=log.45006595._017496.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 10:38:55] 2025-06-03 08:38:26,146 | INFO     | stage-out finished correctly
[2025-06-03 10:38:55] 2025-06-03 08:38:27,900 | INFO     | PID=4176168 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 10:38:55] 2025-06-03 08:38:27,900 | INFO     | .. there are 3 such processes running
[2025-06-03 10:38:55] 2025-06-03 08:38:29,231 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 10:38:55] 2025-06-03 08:38:31,245 | INFO     | job 6677444280 has state=finished
[2025-06-03 10:38:55] 2025-06-03 08:38:31,245 | INFO     | preparing for final server update for job 6677444280 in state='finished'
[2025-06-03 10:38:55] 2025-06-03 08:38:31,245 | INFO     | this job has now completed (state=finished)
[2025-06-03 10:38:55] 2025-06-03 08:38:31,245 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 10:38:55] 2025-06-03 08:38:31,245 | INFO     | log transfer has been attempted: DONE
[2025-06-03 10:38:55] 2025-06-03 08:38:31,245 | INFO     | job 6677444280 has finished - writing final server update
[2025-06-03 10:38:55] 2025-06-03 08:38:31,245 | INFO     | total number of processed events: 400 (read)
[2025-06-03 10:38:55] 2025-06-03 08:38:31,247 | INFO     | executing command: lscpu
[2025-06-03 10:38:55] 2025-06-03 08:38:31,266 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 10:38:55] 2025-06-03 08:38:31,625 | WARNING  | process 4182793 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 10:38:55] 2025-06-03 08:38:31,625 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6677444280/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:38:55] 2025-06-03 08:38:31,744 | INFO     | number of running child processes to parent process 4182793: 1
[2025-06-03 10:38:55] 2025-06-03 08:38:31,744 | INFO     | maximum number of monitored processes: 6
[2025-06-03 10:38:55] 2025-06-03 08:38:32,910 | INFO     | 4844s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 10:38:55] 2025-06-03 08:38:34,248 | INFO     | monitor loop #370: job 0:6677444280 is in state 'finished'
[2025-06-03 10:38:55] 2025-06-03 08:38:34,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 10:38:55] 2025-06-03 08:38:34,418 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 10:38:55] 2025-06-03 08:38:34,418 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6677444280/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:38:55] 2025-06-03 08:38:34,419 | INFO     | extracted standard info from prmon json
[2025-06-03 10:38:55] 2025-06-03 08:38:34,419 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:38:55] 2025-06-03 08:38:34,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:38:55] 2025-06-03 08:38:34,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:38:55] 2025-06-03 08:38:34,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | sum of square deviations: 115715658.0
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | sum of deviations: -1695572897.0
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | mean x: 1748937561.5
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | mean y: 2351943.722222222
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | -- intersect: 25629403451.51964
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | intersect: 25629403451.51964
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | chi2: 0.013614896943933483
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | -- intersect: 25629403451.51964
[2025-06-03 10:38:55] 2025-06-03 08:38:34,420 | INFO     | current memory leak: -14.65 B/s (using 72 data points, chi2=0.01)
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | ..............................
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | . Timing measurements:
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | . get job = 0 s
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | . initial setup = 1 s
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | . payload setup = 4 s
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | . stage-in = 0 s
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | . payload execution = 4814 s
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | . stage-out = 0 s
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | . log creation = 0 s
[2025-06-03 10:38:55] 2025-06-03 08:38:34,421 | INFO     | ..............................
[2025-06-03 10:38:55] 2025-06-03 08:38:34,599 | INFO     | 
[2025-06-03 10:38:55] 2025-06-03 08:38:34,599 | INFO     | job summary report
[2025-06-03 10:38:55] 2025-06-03 08:38:34,599 | INFO     | --------------------------------------------------
[2025-06-03 10:38:55] 2025-06-03 08:38:34,599 | INFO     | PanDA job id: 6677444280
[2025-06-03 10:38:55] 2025-06-03 08:38:34,599 | INFO     | task id: 45006595
[2025-06-03 10:38:55] 2025-06-03 08:38:34,599 | INFO     | errors: (none)
[2025-06-03 10:38:55] 2025-06-03 08:38:34,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:38:55] 2025-06-03 08:38:34,599 | INFO     | pilot state: finished 
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | transexitcode: 0
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | exeerrorcode: 0
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | exeerrordiag: 
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | exitcode: 0
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | exitmsg: OK
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | cpuconsumptiontime: 18351 s
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | nevents: 400
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | neventsw: 0
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | pid: 4182793
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | pgrp: 4182793
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | corecount: 4
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | event service: False
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | sizes: {0: 2405025, 1: 2405224, 3: 2405430, 11: 2405458, 4822: 2431709, 4823: 2440678, 4826: 2440862, 4831: 2441032}
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | --------------------------------------------------
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | 
[2025-06-03 10:38:55] 2025-06-03 08:38:34,600 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-06-03 10:38:55] 2025-06-03 08:38:34,614 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,614 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,614 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,614 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | job 6677444280 has completed (purged errors)
[2025-06-03 10:38:55] 2025-06-03 08:38:34,615 | INFO     | overall cleanup function is called
[2025-06-03 10:38:55] 2025-06-03 08:38:35,622 | INFO     | --- collectZombieJob: --- 10, [4182793]
[2025-06-03 10:38:55] 2025-06-03 08:38:35,623 | INFO     | zombie collector waiting for pid 4182793
[2025-06-03 10:38:55] 2025-06-03 08:38:35,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:38:55] 2025-06-03 08:38:35,623 | INFO     | collected zombie processes
[2025-06-03 10:38:55] 2025-06-03 08:38:35,623 | INFO     | will attempt to kill all subprocesses of pid=4182793
[2025-06-03 10:38:55] 2025-06-03 08:38:35,717 | INFO     | process IDs to be killed: [4182793] (in reverse order)
[2025-06-03 10:38:55] 2025-06-03 08:38:35,758 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:38:55] 2025-06-03 08:38:35,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:38:55] 2025-06-03 08:38:35,761 | INFO     | did not find any defunct processes belonging to 4182793
[2025-06-03 10:38:55] 2025-06-03 08:38:35,763 | INFO     | did not find any defunct processes belonging to 4182793
[2025-06-03 10:38:55] 2025-06-03 08:38:35,763 | INFO     | ready for new job
[2025-06-03 10:38:55] 2025-06-03 08:38:35,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:38:55] 2025-06-03 08:38:35,765 | INFO     | **************************************
[2025-06-03 10:38:55] 2025-06-03 08:38:35,765 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:38:55] 2025-06-03 08:38:35,765 | INFO     | **************************************
[2025-06-03 10:38:55] 2025-06-03 08:38:35,765 | INFO     | 
[2025-06-03 10:38:55] 2025-06-03 08:38:35,765 | INFO     | pilot is running in a VM
[2025-06-03 10:38:55] 2025-06-03 08:38:35,765 | INFO     | architecture information:
[2025-06-03 10:38:55] 2025-06-03 08:38:35,765 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:38:55] 2025-06-03 08:38:35,775 | INFO     | cat /etc/os-release:
[2025-06-03 10:38:55] NAME="CentOS Linux"
[2025-06-03 10:38:55] VERSION="7 (Core)"
[2025-06-03 10:38:55] ID="centos"
[2025-06-03 10:38:55] ID_LIKE="rhel fedora"
[2025-06-03 10:38:55] VERSION_ID="7"
[2025-06-03 10:38:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:38:55] ANSI_COLOR="0;31"
[2025-06-03 10:38:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:38:55] HOME_URL="https://www.centos.org/"
[2025-06-03 10:38:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:38:55] 
[2025-06-03 10:38:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:38:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:38:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:38:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:38:55] 
[2025-06-03 10:38:55] 2025-06-03 08:38:35,775 | INFO     | **************************************
[2025-06-03 10:38:55] 2025-06-03 08:38:36,278 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-06-03 10:38:55] 2025-06-03 08:38:36,289 | INFO     | sufficient remaining disk space (26494369792 B)
[2025-06-03 10:38:55] 2025-06-03 08:38:36,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:38:55] 2025-06-03 08:38:36,290 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:38:55] 2025-06-03 08:38:36,290 | INFO     | update_server=False
[2025-06-03 10:38:55] 2025-06-03 08:38:36,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:38:55] 2025-06-03 08:38:36,290 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 10:38:55] 2025-06-03 08:38:36,290 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:38:55] 2025-06-03 08:38:36,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:38:55] 2025-06-03 08:38:36,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:38:55] 2025-06-03 08:38:36,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:38:55] 2025-06-03 08:38:36,541 | INFO     | all payload control threads have been joined
[2025-06-03 10:38:55] 2025-06-03 08:38:36,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:38:55] 2025-06-03 08:38:36,751 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 10:38:55] 2025-06-03 08:38:36,752 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 10:38:55] 2025-06-03 08:38:36,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:38:55] 2025-06-03 08:38:36,752 | INFO     | will abort loop
[2025-06-03 10:38:55] 2025-06-03 08:38:37,071 | INFO     | all job control threads have been joined
[2025-06-03 10:38:55] 2025-06-03 08:38:37,222 | INFO     | all data control threads have been joined
[2025-06-03 10:38:55] 2025-06-03 08:38:37,295 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:37,295 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:37,351 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:37,547 | INFO     | [payload] control thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:37,757 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:38,021 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:38,077 | INFO     | [job] control thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:38,227 | INFO     | [data] control thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:38,656 | INFO     | [job] validate thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:38,689 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:38,690 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:38,702 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:38,702 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:38,791 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:39,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:38:55] 2025-06-03 08:38:43,788 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:46,896 | INFO     | job.realtimelogging is not enabled
[2025-06-03 10:38:55] 2025-06-03 08:38:47,901 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:38:55] 2025-06-03 08:38:49,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128989694355264)>', '<ExcThread(monitor, started 128989299476224)>']
[2025-06-03 10:38:55] 2025-06-03 08:38:50,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:38:55] 2025-06-03 08:38:50,358 | INFO     | [monitor] control thread has ended
[2025-06-03 10:38:55] 2025-06-03 08:38:54,972 | INFO     | all workflow threads have been joined
[2025-06-03 10:38:55] 2025-06-03 08:38:54,972 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:38:55] 2025-06-03 08:38:54,972 | INFO     | traces error code: 0
[2025-06-03 10:38:55] 2025-06-03 08:38:54,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:38:55] 2025-06-03 08:38:55,040 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:38:55] 2025-06-03 08:38:55,042 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:38:55] 2025-06-03 08:38:55,044 [wrapper] pilotpid: 4176168
[2025-06-03 10:38:55] 2025-06-03 08:38:55,047 [wrapper] Pilot exit status: 0
[2025-06-03 10:38:55] 2025-06-03 08:38:55,056 [wrapper] pandaids: 6677444280
[2025-06-03 10:38:55] 2025-06-03 08:38:55,084 [wrapper] cleanup supervisor_pilot   48482 4176169
[2025-06-03 10:38:55] 2025-06-03 08:38:55,087 [wrapper] Test setup, not cleaning
[2025-06-03 10:38:55] 2025-06-03 08:38:55,089 [wrapper] apfmon messages muted
[2025-06-03 10:38:55] 2025-06-03 08:38:55,092 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:38:55] 2025-06-03 08:38:55,094 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:38:55]  *** Error codes and diagnostics ***
[2025-06-03 10:38:55]     "exeErrorCode": 0,
[2025-06-03 10:38:55]     "exeErrorDiag": "",
[2025-06-03 10:38:55]     "pilotErrorCode": 0,
[2025-06-03 10:38:55]     "pilotErrorDiag": "",
[2025-06-03 10:38:55]  *** Listing of results directory ***
[2025-06-03 10:38:55] insgesamt 395368
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc    495897 Jun  3 04:22 pilot3.tar.gz
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc      5111 Jun  3 04:33 queuedata.json
[2025-06-03 10:38:55] -rwx------ 1 yeti boinc     37140 Jun  3 04:35 runpilot2-wrapper.sh
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc       100 Jun  3 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:38:55] -rwxr-xr-x 1 yeti boinc      7986 Jun  3 09:17 run_atlas
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc       105 Jun  3 09:17 job.xml
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc      6710 Jun  3 09:17 init_data.xml
[2025-06-03 10:38:55] -rw-r--r-- 2 yeti boinc 216710138 Jun  3 09:17 EVNT.45006593._000700.pool.root.1
[2025-06-03 10:38:55] -rw-r--r-- 2 yeti boinc     15093 Jun  3 09:17 start_atlas.sh
[2025-06-03 10:38:55] drwxrwx--x 2 yeti boinc      4096 Jun  3 09:17 shared
[2025-06-03 10:38:55] -rw-r--r-- 2 yeti boinc    508880 Jun  3 09:17 input.tar.gz
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc         0 Jun  3 09:17 boinc_lockfile
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc      2524 Jun  3 09:17 pandaJob.out
[2025-06-03 10:38:55] -rw------- 1 yeti boinc    986901 Jun  3 09:17 agis_schedconf.cvmfs.json
[2025-06-03 10:38:55] -rw------- 1 yeti boinc   1603667 Jun  3 09:17 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:38:55] drwx------ 4 yeti boinc      4096 Jun  3 09:17 pilot3
[2025-06-03 10:38:55] -rw------- 1 yeti boinc 182831099 Jun  3 10:38 HITS.45006595._017496.pool.root.1
[2025-06-03 10:38:55] -rw------- 1 yeti boinc      1018 Jun  3 10:38 memory_monitor_summary.json
[2025-06-03 10:38:55] -rw------- 1 yeti boinc    249969 Jun  3 10:38 log.45006595._017496.job.log.tgz.1
[2025-06-03 10:38:55] -rw------- 1 yeti boinc        95 Jun  3 10:38 pilot_heartbeat.json
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc      8192 Jun  3 10:38 boinc_mmap_file
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc        27 Jun  3 10:38 wrapper_checkpoint.txt
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc       529 Jun  3 10:38 boinc_task_state.xml
[2025-06-03 10:38:55] -rw------- 1 yeti boinc      7648 Jun  3 10:38 heartbeat.json
[2025-06-03 10:38:55] -rw------- 1 yeti boinc      4810 Jun  3 10:38 pilotlog.txt
[2025-06-03 10:38:55] -rw------- 1 yeti boinc    491162 Jun  3 10:38 log.45006595._017496.job.log.1
[2025-06-03 10:38:55] -rw------- 1 yeti boinc       357 Jun  3 10:38 output.list
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc       620 Jun  3 10:38 runtime_log
[2025-06-03 10:38:55] -rw------- 1 yeti boinc    757760 Jun  3 10:38 result.tar.gz
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc      8838 Jun  3 10:38 runtime_log.err
[2025-06-03 10:38:55] -rw------- 1 yeti boinc       640 Jun  3 10:38 o4ZMDmefWg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2bhKDmemBUVo.diag
[2025-06-03 10:38:55] -rw-r--r-- 1 yeti boinc     21621 Jun  3 10:38 stderr.txt
[2025-06-03 10:38:55] HITS file was successfully produced:
[2025-06-03 10:38:55] -rw------- 1 yeti boinc 182831099 Jun  3 10:38 shared/HITS.pool.root.1
[2025-06-03 10:38:55]  *** Contents of shared directory: ***
[2025-06-03 10:38:55] insgesamt 391444
[2025-06-03 10:38:55] -rw-r--r-- 2 yeti boinc 216710138 Jun  3 09:17 ATLAS.root_0
[2025-06-03 10:38:55] -rw-r--r-- 2 yeti boinc     15093 Jun  3 09:17 start_atlas.sh
[2025-06-03 10:38:55] -rw-r--r-- 2 yeti boinc    508880 Jun  3 09:17 input.tar.gz
[2025-06-03 10:38:55] -rw------- 1 yeti boinc 182831099 Jun  3 10:38 HITS.pool.root.1
[2025-06-03 10:38:55] -rw------- 1 yeti boinc    757760 Jun  3 10:38 result.tar.gz
10:38:56 (4172087): run_atlas exited; CPU time 18383.025077
10:38:56 (4172087): called boinc_finish(0)

</stderr_txt>
]]>

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