Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:25:05 (2771497): wrapper (7.7.26015): starting
03:25:05 (2771497): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:25:05] Arguments: --nthreads 8
[2025-06-03 03:25:05] Threads: 8
[2025-06-03 03:25:05] Checking for CVMFS
[2025-06-03 03:25:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:25:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:25:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:25:05] 2.12.6.0 2157222 21525 210272 146734 2 414 25775643 40960001 10075 16776704 0 267872406 99.775 155143554 36375 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 03:25:05] CVMFS is ok
[2025-06-03 03:25:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:25:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:25:05] Further information can be found at the LHC@home message board.
[2025-06-03 03:25:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:25:05] Checking for apptainer binary...
[2025-06-03 03:25:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:25:05] Running /usr/bin/apptainer --version
[2025-06-03 03:25:05] apptainer version 1.4.1-1.el9
[2025-06-03 03:25:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:25:05] c8-6-10.aglt2.org
[2025-06-03 03:25:05] apptainer works
[2025-06-03 03:25:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:25:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:25:05] Starting ATLAS job with PandaID=6677444285
[2025-06-03 03:25:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 04:18:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 04:18:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 04:18:07]  is_altstaged=None
[2025-06-03 04:18:07]  is_tar=False
[2025-06-03 04:18:07]  lfn=log.45006595._017501.job.log.tgz.1
[2025-06-03 04:18:07]  mtime=0
[2025-06-03 04:18:07]  protocol_id=None
[2025-06-03 04:18:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 04:18:07]  replicas=None
[2025-06-03 04:18:07]  scope=mc23_13p6TeV
[2025-06-03 04:18:07]  status=None
[2025-06-03 04:18:07]  status_code=0
[2025-06-03 04:18:07]  storage_token=
[2025-06-03 04:18:07]  surl=/tmp/boinchome/slots/9/PanDA_Pilot-6677444285/log.45006595._017501.job.log.tgz.1
[2025-06-03 04:18:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/b1/log.45006595._017501.job.log.tgz.1
[2025-06-03 04:18:07]  workdir=None
[2025-06-03 04:18:07] ]
[2025-06-03 04:18:07] 2025-06-03 08:17:26,725 | INFO     | transferring file log.45006595._017501.job.log.tgz.1 from /tmp/boinchome/slots/9/PanDA_Pilot-6677444285/log.45006595._017501.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 04:18:07] 2025-06-03 08:17:26,725 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/9/PanDA_Pilot-6677444285/log.45006595._017501.job.log.tgz.1 /tmp/boinchome/slots/9/log.45006595._017501.job
[2025-06-03 04:18:07] 2025-06-03 08:17:26,742 | INFO     | adding to output.list: log.45006595._017501.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/b1/log.45006595._017501.job.log.tg
[2025-06-03 04:18:07] 2025-06-03 08:17:26,742 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 04:18:07] 2025-06-03 08:17:26,742 | INFO     | summary of transferred files:
[2025-06-03 04:18:07] 2025-06-03 08:17:26,742 | INFO     |  -- lfn=log.45006595._017501.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 04:18:07] 2025-06-03 08:17:26,742 | INFO     | stage-out finished correctly
[2025-06-03 04:18:07] 2025-06-03 08:17:27,698 | WARNING  | process 2802529 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 04:18:07] 2025-06-03 08:17:27,699 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6677444285/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 04:18:07] 2025-06-03 08:17:28,144 | INFO     | number of running child processes to parent process 2802529: 1
[2025-06-03 04:18:07] 2025-06-03 08:17:28,144 | INFO     | maximum number of monitored processes: 6
[2025-06-03 04:18:07] 2025-06-03 08:17:28,425 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 04:18:07] 2025-06-03 08:17:30,651 | INFO     | monitor loop #216: job 0:6677444285 is in state 'finished'
[2025-06-03 04:18:07] 2025-06-03 08:17:30,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:18:07] 2025-06-03 08:17:30,734 | INFO     | job 6677444285 has state=finished
[2025-06-03 04:18:07] 2025-06-03 08:17:30,735 | INFO     | preparing for final server update for job 6677444285 in state='finished'
[2025-06-03 04:18:07] 2025-06-03 08:17:30,735 | INFO     | this job has now completed (state=finished)
[2025-06-03 04:18:07] 2025-06-03 08:17:30,735 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 04:18:07] 2025-06-03 08:17:30,735 | INFO     | log transfer has been attempted: DONE
[2025-06-03 04:18:07] 2025-06-03 08:17:30,735 | INFO     | job 6677444285 has finished - writing final server update
[2025-06-03 04:18:07] 2025-06-03 08:17:30,735 | INFO     | total number of processed events: 400 (read)
[2025-06-03 04:18:07] 2025-06-03 08:17:30,740 | INFO     | executing command: lscpu
[2025-06-03 04:18:07] 2025-06-03 08:17:30,805 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 04:18:07] 2025-06-03 08:17:33,155 | INFO     | monitor loop #217: job 0:6677444285 is in state 'finished'
[2025-06-03 04:18:07] 2025-06-03 08:17:33,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:18:07] 2025-06-03 08:17:34,738 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 04:18:07] 2025-06-03 08:17:34,738 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6677444285/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 04:18:07] 2025-06-03 08:17:34,739 | INFO     | extracted standard info from prmon json
[2025-06-03 04:18:07] 2025-06-03 08:17:34,739 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 04:18:07] 2025-06-03 08:17:34,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 04:18:07] 2025-06-03 08:17:34,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 04:18:07] 2025-06-03 08:17:34,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 04:18:07] 2025-06-03 08:17:34,740 | INFO     | fitting pss+swap vs Time
[2025-06-03 04:18:07] 2025-06-03 08:17:34,740 | INFO     | sum of square deviations: 26400495.0
[2025-06-03 04:18:07] 2025-06-03 08:17:34,740 | INFO     | sum of deviations: 4719220866.5
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | mean x: 1748937148.5
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | mean y: 2122037.477272727
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | -- intersect: -312629163300.0972
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | intersect: -312629163300.0972
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | chi2: 0.7326197309084251
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | -- intersect: -312629163300.0972
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | current memory leak: 178.76 B/s (using 44 data points, chi2=0.73)
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | ..............................
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | . Timing measurements:
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | . get job = 0 s
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | . initial setup = 2 s
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | . payload setup = 3 s
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | . stage-in = 0 s
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | . payload execution = 3113 s
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | . stage-out = 0 s
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | . log creation = 0 s
[2025-06-03 04:18:07] 2025-06-03 08:17:34,741 | INFO     | ..............................
[2025-06-03 04:18:07] 2025-06-03 08:17:34,795 | INFO     | 
[2025-06-03 04:18:07] 2025-06-03 08:17:34,795 | INFO     | job summary report
[2025-06-03 04:18:07] 2025-06-03 08:17:34,795 | INFO     | --------------------------------------------------
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | PanDA job id: 6677444285
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | task id: 45006595
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | errors: (none)
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | pilot state: finished 
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | transexitcode: 0
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | exeerrorcode: 0
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | exeerrordiag: 
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | exitcode: 0
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | exitmsg: OK
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | cpuconsumptiontime: 20011 s
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | nevents: 400
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | neventsw: 0
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | pid: 2802529
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | pgrp: 2802529
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | corecount: 8
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | event service: False
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | sizes: {0: 2405182, 3: 2405388, 11: 2405416, 3121: 2430888, 3122: 2439829, 3124: 2439885, 3130: 2440183}
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | --------------------------------------------------
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | 
[2025-06-03 04:18:07] 2025-06-03 08:17:34,796 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 04:18:07] 2025-06-03 08:17:34,813 | INFO     | job 6677444285 has completed (purged errors)
[2025-06-03 04:18:07] 2025-06-03 08:17:34,813 | INFO     | overall cleanup function is called
[2025-06-03 04:18:07] 2025-06-03 08:17:35,819 | INFO     | --- collectZombieJob: --- 10, [2802529]
[2025-06-03 04:18:07] 2025-06-03 08:17:35,819 | INFO     | zombie collector waiting for pid 2802529
[2025-06-03 04:18:07] 2025-06-03 08:17:35,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 04:18:07] 2025-06-03 08:17:35,819 | INFO     | collected zombie processes
[2025-06-03 04:18:07] 2025-06-03 08:17:35,819 | INFO     | will attempt to kill all subprocesses of pid=2802529
[2025-06-03 04:18:07] 2025-06-03 08:17:36,254 | INFO     | process IDs to be killed: [2802529] (in reverse order)
[2025-06-03 04:18:07] 2025-06-03 08:17:36,416 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 04:18:07] 2025-06-03 08:17:36,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 04:18:07] 2025-06-03 08:17:36,438 | INFO     | did not find any defunct processes belonging to 2802529
[2025-06-03 04:18:07] 2025-06-03 08:17:36,459 | INFO     | did not find any defunct processes belonging to 2802529
[2025-06-03 04:18:07] 2025-06-03 08:17:36,459 | INFO     | ready for new job
[2025-06-03 04:18:07] 2025-06-03 08:17:36,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 04:18:07] 2025-06-03 08:17:36,461 | INFO     | **************************************
[2025-06-03 04:18:07] 2025-06-03 08:17:36,461 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 04:18:07] 2025-06-03 08:17:36,461 | INFO     | **************************************
[2025-06-03 04:18:07] 2025-06-03 08:17:36,461 | INFO     | 
[2025-06-03 04:18:07] 2025-06-03 08:17:36,479 | INFO     | architecture information:
[2025-06-03 04:18:07] 2025-06-03 08:17:36,479 | INFO     | executing command: cat /etc/os-release
[2025-06-03 04:18:07] 2025-06-03 08:17:36,492 | INFO     | cat /etc/os-release:
[2025-06-03 04:18:07] NAME="CentOS Linux"
[2025-06-03 04:18:07] VERSION="7 (Core)"
[2025-06-03 04:18:07] ID="centos"
[2025-06-03 04:18:07] ID_LIKE="rhel fedora"
[2025-06-03 04:18:07] VERSION_ID="7"
[2025-06-03 04:18:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 04:18:07] ANSI_COLOR="0;31"
[2025-06-03 04:18:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 04:18:07] HOME_URL="https://www.centos.org/"
[2025-06-03 04:18:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 04:18:07] 
[2025-06-03 04:18:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 04:18:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 04:18:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 04:18:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 04:18:07] 
[2025-06-03 04:18:07] 2025-06-03 08:17:36,492 | INFO     | **************************************
[2025-06-03 04:18:07] 2025-06-03 08:17:36,995 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-06-03 04:18:07] 2025-06-03 08:17:37,014 | INFO     | sufficient remaining disk space (164776378368 B)
[2025-06-03 04:18:07] 2025-06-03 08:17:37,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 04:18:07] 2025-06-03 08:17:37,014 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 04:18:07] 2025-06-03 08:17:37,014 | INFO     | update_server=False
[2025-06-03 04:18:07] 2025-06-03 08:17:37,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 04:18:07] 2025-06-03 08:17:37,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:18:07] 2025-06-03 08:17:37,015 | INFO     | aborting loop
[2025-06-03 04:18:07] 2025-06-03 08:17:37,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 04:18:07] 2025-06-03 08:17:37,760 | INFO     | all data control threads have been joined
[2025-06-03 04:18:07] 2025-06-03 08:17:37,778 | INFO     | all payload control threads have been joined
[2025-06-03 04:18:07] 2025-06-03 08:17:37,892 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 04:18:07] 2025-06-03 08:17:37,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 04:18:07] 2025-06-03 08:17:37,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 04:18:07] 2025-06-03 08:17:38,019 | INFO     | [job] job monitor thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,020 | INFO     | [job] retrieve thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,314 | INFO     | all job control threads have been joined
[2025-06-03 04:18:07] 2025-06-03 08:17:38,604 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,612 | INFO     | [job] validate thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,668 | INFO     | [data] copytool_in thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,766 | INFO     | [data] control thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,782 | INFO     | [payload] control thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,857 | INFO     | [payload] failed_post thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,886 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,896 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:38,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 04:18:07] 2025-06-03 08:17:39,311 | INFO     | [data] copytool_out thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:39,319 | INFO     | [job] control thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:39,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:39,463 | INFO     | [payload] validate_post thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:39,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:18:07] 2025-06-03 08:17:40,811 | INFO     | [job] queue monitor thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:42,990 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 04:18:07] 2025-06-03 08:17:44,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140498458535744)>', '<ExcThread(monitor, started 140497825814272)>']
[2025-06-03 04:18:07] 2025-06-03 08:17:44,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 04:18:07] 2025-06-03 08:17:44,927 | INFO     | [monitor] control thread has ended
[2025-06-03 04:18:07] 2025-06-03 08:17:49,214 | INFO     | all workflow threads have been joined
[2025-06-03 04:18:07] 2025-06-03 08:17:49,214 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 04:18:07] 2025-06-03 08:17:49,214 | INFO     | traces error code: 0
[2025-06-03 04:18:07] 2025-06-03 08:17:49,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 04:18:07] 2025-06-03 08:17:49,296 [wrapper] ==== pilot stdout END ====
[2025-06-03 04:18:07] 2025-06-03 08:17:49,298 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 04:18:07] 2025-06-03 08:17:49,300 [wrapper] pilotpid: 2777362
[2025-06-03 04:18:07] 2025-06-03 08:17:49,301 [wrapper] Pilot exit status: 0
[2025-06-03 04:18:07] 2025-06-03 08:17:49,310 [wrapper] pandaids: 6677444285
[2025-06-03 04:18:07] 2025-06-03 08:17:49,416 [wrapper] cleanup supervisor_pilot 3622444 2777363
[2025-06-03 04:18:07] 2025-06-03 08:17:49,418 [wrapper] Test setup, not cleaning
[2025-06-03 04:18:07] 2025-06-03 08:17:49,420 [wrapper] apfmon messages muted
[2025-06-03 04:18:07] 2025-06-03 08:17:49,422 [wrapper] ==== wrapper stdout END ====
[2025-06-03 04:18:07] 2025-06-03 08:17:49,424 [wrapper] ==== wrapper stderr END ====
[2025-06-03 04:18:07]  *** Error codes and diagnostics ***
[2025-06-03 04:18:07]     "exeErrorCode": 0,
[2025-06-03 04:18:07]     "exeErrorDiag": "",
[2025-06-03 04:18:07]     "pilotErrorCode": 0,
[2025-06-03 04:18:07]     "pilotErrorDiag": "",
[2025-06-03 04:18:07]  *** Listing of results directory ***
[2025-06-03 04:18:07] total 390224
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 22:22 pilot3.tar.gz
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 22:33 queuedata.json
[2025-06-03 04:18:07] -rwx------. 1 boincer umatlas     37140 Jun  2 22:35 runpilot2-wrapper.sh
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas       100 Jun  3 03:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 04:18:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 03:25 run_atlas
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas       105 Jun  3 03:25 job.xml
[2025-06-03 04:18:07] -rw-r--r--. 2 boincer umatlas 216710138 Jun  3 03:25 EVNT.45006593._000700.pool.root.1
[2025-06-03 04:18:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:25 start_atlas.sh
[2025-06-03 04:18:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 03:25 shared
[2025-06-03 04:18:07] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 03:25 input.tar.gz
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas         0 Jun  3 03:25 boinc_lockfile
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 03:25 pandaJob.out
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas    985499 Jun  3 03:25 agis_schedconf.cvmfs.json
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas   1603667 Jun  3 03:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 04:18:07] drwx------. 4 boincer umatlas      4096 Jun  3 03:25 pilot3
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas      7162 Jun  3 04:13 init_data.xml
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas 177812053 Jun  3 04:17 HITS.45006595._017501.pool.root.1
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas       529 Jun  3 04:17 boinc_task_state.xml
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas        95 Jun  3 04:17 pilot_heartbeat.json
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas      1029 Jun  3 04:17 memory_monitor_summary.json
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas    300414 Jun  3 04:17 log.45006595._017501.job.log.tgz.1
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas      7683 Jun  3 04:17 heartbeat.json
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas      4354 Jun  3 04:17 pilotlog.txt
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas    317308 Jun  3 04:17 log.45006595._017501.job.log.1
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas       357 Jun  3 04:17 output.list
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas       620 Jun  3 04:17 runtime_log
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas    634880 Jun  3 04:17 result.tar.gz
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 04:17 runtime_log.err
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas       651 Jun  3 04:17 DXhMDmefWg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7bhKDmleCaLm.diag
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas        27 Jun  3 04:18 wrapper_checkpoint.txt
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 04:18 boinc_mmap_file
[2025-06-03 04:18:07] -rw-r--r--. 1 boincer umatlas     21386 Jun  3 04:18 stderr.txt
[2025-06-03 04:18:07] HITS file was successfully produced:
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas 177812053 Jun  3 04:17 shared/HITS.pool.root.1
[2025-06-03 04:18:07]  *** Contents of shared directory: ***
[2025-06-03 04:18:07] total 386420
[2025-06-03 04:18:07] -rw-r--r--. 2 boincer umatlas 216710138 Jun  3 03:25 ATLAS.root_0
[2025-06-03 04:18:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:25 start_atlas.sh
[2025-06-03 04:18:07] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 03:25 input.tar.gz
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas 177812053 Jun  3 04:17 HITS.pool.root.1
[2025-06-03 04:18:07] -rw-------. 1 boincer umatlas    634880 Jun  3 04:17 result.tar.gz
04:18:08 (2771497): run_atlas exited; CPU time 20090.677323
04:18:08 (2771497): called boinc_finish(0)

</stderr_txt>
]]>

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