Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:10:16 (1013815): wrapper (7.7.26015): starting
03:10:16 (1013815): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:10:16] Arguments: --nthreads 8
[2025-06-03 03:10:16] Threads: 8
[2025-06-03 03:10:16] Checking for CVMFS
[2025-06-03 03:10:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:10:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:10:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:10:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:10:16] 2.12.6.0 1594372 21755 337376 146733 3 195 26219578 32935937 14348 16776704 0 161278661 99.627 172065845 17265 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 03:10:16] CVMFS is ok
[2025-06-03 03:10:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:10:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:10:16] Further information can be found at the LHC@home message board.
[2025-06-03 03:10:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:10:16] Checking for apptainer binary...
[2025-06-03 03:10:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:10:16] Running /usr/bin/apptainer --version
[2025-06-03 03:10:16] apptainer version 1.4.1-1.el9
[2025-06-03 03:10:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:10:16] c7-4-31.aglt2.org
[2025-06-03 03:10:16] apptainer works
[2025-06-03 03:10:16] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:10:16] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:10:16] Starting ATLAS job with PandaID=6665990322
[2025-06-03 03:10:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 04:41:45]  *** The last 200 lines of the pilot log: ***
[2025-06-03 04:41:45]  guid=d04ba02b-2974-4804-af34-a0a1dcbf1f10
[2025-06-03 04:41:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 04:41:45]  is_altstaged=None
[2025-06-03 04:41:45]  is_tar=False
[2025-06-03 04:41:45]  lfn=log.44871837._051776.job.log.tgz.1
[2025-06-03 04:41:45]  mtime=0
[2025-06-03 04:41:45]  protocol_id=None
[2025-06-03 04:41:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 04:41:45]  replicas=None
[2025-06-03 04:41:45]  scope=mc23_13p6TeV
[2025-06-03 04:41:45]  status=None
[2025-06-03 04:41:45]  status_code=0
[2025-06-03 04:41:45]  storage_token=
[2025-06-03 04:41:45]  surl=/tmp/boinchome/slots/9/PanDA_Pilot-6665990322/log.44871837._051776.job.log.tgz.1
[2025-06-03 04:41:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/a3/log.44871837._051776.job.log.tgz.1
[2025-06-03 04:41:45]  workdir=None
[2025-06-03 04:41:45] ]
[2025-06-03 04:41:45] 2025-06-03 08:41:20,384 | INFO     | transferring file log.44871837._051776.job.log.tgz.1 from /tmp/boinchome/slots/9/PanDA_Pilot-6665990322/log.44871837._051776.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 04:41:45] 2025-06-03 08:41:20,384 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/9/PanDA_Pilot-6665990322/log.44871837._051776.job.log.tgz.1 /tmp/boinchome/slots/9/log.44871837._051776.job
[2025-06-03 04:41:45] 2025-06-03 08:41:20,405 | INFO     | adding to output.list: log.44871837._051776.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/a3/log.44871837._051776.job.log.tg
[2025-06-03 04:41:45] 2025-06-03 08:41:20,406 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 04:41:45] 2025-06-03 08:41:20,406 | INFO     | summary of transferred files:
[2025-06-03 04:41:45] 2025-06-03 08:41:20,406 | INFO     |  -- lfn=log.44871837._051776.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 04:41:45] 2025-06-03 08:41:20,407 | INFO     | stage-out finished correctly
[2025-06-03 04:41:45] 2025-06-03 08:41:21,253 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 04:41:45] 2025-06-03 08:41:21,326 | INFO     | job 6665990322 has state=finished
[2025-06-03 04:41:45] 2025-06-03 08:41:21,327 | INFO     | preparing for final server update for job 6665990322 in state='finished'
[2025-06-03 04:41:45] 2025-06-03 08:41:21,327 | INFO     | this job has now completed (state=finished)
[2025-06-03 04:41:45] 2025-06-03 08:41:21,327 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 04:41:45] 2025-06-03 08:41:21,327 | INFO     | log transfer has been attempted: DONE
[2025-06-03 04:41:45] 2025-06-03 08:41:21,327 | INFO     | job 6665990322 has finished - writing final server update
[2025-06-03 04:41:45] 2025-06-03 08:41:21,328 | INFO     | total number of processed events: 400 (read)
[2025-06-03 04:41:45] 2025-06-03 08:41:21,333 | INFO     | executing command: lscpu
[2025-06-03 04:41:45] 2025-06-03 08:41:21,422 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 04:41:45] 2025-06-03 08:41:22,604 | INFO     | monitor loop #392: job 0:6665990322 is in state 'finished'
[2025-06-03 04:41:45] 2025-06-03 08:41:22,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:41:45] 2025-06-03 08:41:25,107 | INFO     | monitor loop #393: job 0:6665990322 is in state 'finished'
[2025-06-03 04:41:45] 2025-06-03 08:41:25,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:41:45] 2025-06-03 08:41:25,894 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 04:41:45] 2025-06-03 08:41:25,894 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6665990322/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 04:41:45] 2025-06-03 08:41:25,895 | INFO     | extracted standard info from prmon json
[2025-06-03 04:41:45] 2025-06-03 08:41:25,896 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 04:41:45] 2025-06-03 08:41:25,896 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 04:41:45] 2025-06-03 08:41:25,896 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 04:41:45] 2025-06-03 08:41:25,896 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 04:41:45] 2025-06-03 08:41:25,898 | INFO     | fitting pss+swap vs Time
[2025-06-03 04:41:45] 2025-06-03 08:41:25,898 | INFO     | sum of square deviations: 170944600.5
[2025-06-03 04:41:45] 2025-06-03 08:41:25,898 | INFO     | sum of deviations: 12450365258.5
[2025-06-03 04:41:45] 2025-06-03 08:41:25,899 | INFO     | mean x: 1748937430.5
[2025-06-03 04:41:45] 2025-06-03 08:41:25,899 | INFO     | mean y: 2130927.93902439
[2025-06-03 04:41:45] 2025-06-03 08:41:25,899 | INFO     | -- intersect: -127377790756.0305
[2025-06-03 04:41:45] 2025-06-03 08:41:25,899 | INFO     | intersect: -127377790756.0305
[2025-06-03 04:41:45] 2025-06-03 08:41:25,899 | INFO     | chi2: 0.9838074704582052
[2025-06-03 04:41:45] 2025-06-03 08:41:25,899 | INFO     | -- intersect: -127377790756.0305
[2025-06-03 04:41:45] 2025-06-03 08:41:25,899 | INFO     | current memory leak: 72.83 B/s (using 82 data points, chi2=0.98)
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | ..............................
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | . Timing measurements:
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | . get job = 0 s
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | . initial setup = 3 s
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | . payload setup = 6 s
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | . stage-in = 0 s
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | . payload execution = 5425 s
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | . stage-out = 0 s
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | . log creation = 0 s
[2025-06-03 04:41:45] 2025-06-03 08:41:25,900 | INFO     | ..............................
[2025-06-03 04:41:45] 2025-06-03 08:41:26,414 | INFO     | 
[2025-06-03 04:41:45] 2025-06-03 08:41:26,414 | INFO     | job summary report
[2025-06-03 04:41:45] 2025-06-03 08:41:26,414 | INFO     | --------------------------------------------------
[2025-06-03 04:41:45] 2025-06-03 08:41:26,414 | INFO     | PanDA job id: 6665990322
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | task id: 44871837
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | errors: (none)
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | pilot state: finished 
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | transexitcode: 0
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | exeerrorcode: 0
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | exeerrordiag: 
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | exitcode: 0
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | exitmsg: OK
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | cpuconsumptiontime: 37592 s
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | nevents: 400
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | neventsw: 0
[2025-06-03 04:41:45] 2025-06-03 08:41:26,415 | INFO     | pid: 1042902
[2025-06-03 04:41:45] 2025-06-03 08:41:26,416 | INFO     | pgrp: 1042902
[2025-06-03 04:41:45] 2025-06-03 08:41:26,416 | INFO     | corecount: 8
[2025-06-03 04:41:45] 2025-06-03 08:41:26,416 | INFO     | event service: False
[2025-06-03 04:41:45] 2025-06-03 08:41:26,416 | INFO     | sizes: {0: 2405228, 5: 2405434, 11: 2405490, 5436: 2440906, 5437: 2440906, 5442: 2441076}
[2025-06-03 04:41:45] 2025-06-03 08:41:26,416 | INFO     | --------------------------------------------------
[2025-06-03 04:41:45] 2025-06-03 08:41:26,416 | INFO     | 
[2025-06-03 04:41:45] 2025-06-03 08:41:26,416 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-06-03 04:41:45] 2025-06-03 08:41:26,437 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,439 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,439 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 04:41:45] 2025-06-03 08:41:26,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,439 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 04:41:45] 2025-06-03 08:41:26,439 | INFO     | job 6665990322 has completed (purged errors)
[2025-06-03 04:41:45] 2025-06-03 08:41:26,439 | INFO     | overall cleanup function is called
[2025-06-03 04:41:45] 2025-06-03 08:41:26,958 | INFO     | PID=1022985 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 04:41:45] 2025-06-03 08:41:26,959 | INFO     | .. there are 13 such processes running
[2025-06-03 04:41:45] 2025-06-03 08:41:27,447 | INFO     | --- collectZombieJob: --- 10, [1042902]
[2025-06-03 04:41:45] 2025-06-03 08:41:27,447 | INFO     | zombie collector waiting for pid 1042902
[2025-06-03 04:41:45] 2025-06-03 08:41:27,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 04:41:45] 2025-06-03 08:41:27,448 | INFO     | collected zombie processes
[2025-06-03 04:41:45] 2025-06-03 08:41:27,448 | INFO     | will attempt to kill all subprocesses of pid=1042902
[2025-06-03 04:41:45] 2025-06-03 08:41:27,844 | INFO     | process IDs to be killed: [1042902] (in reverse order)
[2025-06-03 04:41:45] 2025-06-03 08:41:27,975 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 04:41:45] 2025-06-03 08:41:27,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 04:41:45] 2025-06-03 08:41:27,992 | INFO     | did not find any defunct processes belonging to 1042902
[2025-06-03 04:41:45] 2025-06-03 08:41:28,008 | INFO     | did not find any defunct processes belonging to 1042902
[2025-06-03 04:41:45] 2025-06-03 08:41:28,008 | INFO     | ready for new job
[2025-06-03 04:41:45] 2025-06-03 08:41:28,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 04:41:45] 2025-06-03 08:41:28,010 | INFO     | **************************************
[2025-06-03 04:41:45] 2025-06-03 08:41:28,010 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 04:41:45] 2025-06-03 08:41:28,010 | INFO     | **************************************
[2025-06-03 04:41:45] 2025-06-03 08:41:28,010 | INFO     | 
[2025-06-03 04:41:45] 2025-06-03 08:41:28,025 | INFO     | architecture information:
[2025-06-03 04:41:45] 2025-06-03 08:41:28,025 | INFO     | executing command: cat /etc/os-release
[2025-06-03 04:41:45] 2025-06-03 08:41:28,046 | INFO     | cat /etc/os-release:
[2025-06-03 04:41:45] NAME="CentOS Linux"
[2025-06-03 04:41:45] VERSION="7 (Core)"
[2025-06-03 04:41:45] ID="centos"
[2025-06-03 04:41:45] ID_LIKE="rhel fedora"
[2025-06-03 04:41:45] VERSION_ID="7"
[2025-06-03 04:41:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 04:41:45] ANSI_COLOR="0;31"
[2025-06-03 04:41:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 04:41:45] HOME_URL="https://www.centos.org/"
[2025-06-03 04:41:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 04:41:45] 
[2025-06-03 04:41:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 04:41:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 04:41:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 04:41:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 04:41:45] 
[2025-06-03 04:41:45] 2025-06-03 08:41:28,046 | INFO     | **************************************
[2025-06-03 04:41:45] 2025-06-03 08:41:28,549 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-06-03 04:41:45] 2025-06-03 08:41:28,565 | INFO     | sufficient remaining disk space (70585942016 B)
[2025-06-03 04:41:45] 2025-06-03 08:41:28,565 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 04:41:45] 2025-06-03 08:41:28,565 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 04:41:45] 2025-06-03 08:41:28,565 | INFO     | update_server=False
[2025-06-03 04:41:45] 2025-06-03 08:41:28,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 04:41:45] 2025-06-03 08:41:28,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 04:41:45] 2025-06-03 08:41:28,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:41:45] 2025-06-03 08:41:28,616 | INFO     | aborting loop
[2025-06-03 04:41:45] 2025-06-03 08:41:28,964 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 04:41:45] 2025-06-03 08:41:28,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 04:41:45] 2025-06-03 08:41:28,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 04:41:45] 2025-06-03 08:41:29,070 | INFO     | all data control threads have been joined
[2025-06-03 04:41:45] 2025-06-03 08:41:29,462 | INFO     | all payload control threads have been joined
[2025-06-03 04:41:45] 2025-06-03 08:41:29,571 | INFO     | [job] retrieve thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:29,596 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:29,621 | INFO     | [job] job monitor thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:29,675 | INFO     | all job control threads have been joined
[2025-06-03 04:41:45] 2025-06-03 08:41:29,779 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:30,075 | INFO     | [data] control thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:30,274 | INFO     | [payload] validate_post thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:30,467 | INFO     | [payload] control thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:30,571 | INFO     | [data] copytool_out thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:30,572 | INFO     | [job] validate thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:30,649 | INFO     | [payload] failed_post thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:30,680 | INFO     | [job] control thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:30,813 | INFO     | [data] copytool_in thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:30,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:41:45] 2025-06-03 08:41:31,045 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:31,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 04:41:45] 2025-06-03 08:41:31,995 | INFO     | [job] queue monitor thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:35,839 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:38,629 | INFO     | job.realtimelogging is not enabled
[2025-06-03 04:41:45] 2025-06-03 08:41:39,635 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 04:41:45] 2025-06-03 08:41:40,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040231626560)>', '<ExcThread(monitor, started 140039740708608)>']
[2025-06-03 04:41:45] 2025-06-03 08:41:41,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 04:41:45] 2025-06-03 08:41:41,020 | INFO     | [monitor] control thread has ended
[2025-06-03 04:41:45] 2025-06-03 08:41:45,513 | INFO     | all workflow threads have been joined
[2025-06-03 04:41:45] 2025-06-03 08:41:45,513 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 04:41:45] 2025-06-03 08:41:45,514 | INFO     | traces error code: 0
[2025-06-03 04:41:45] 2025-06-03 08:41:45,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 04:41:45] 2025-06-03 08:41:45,629 [wrapper] ==== pilot stdout END ====
[2025-06-03 04:41:45] 2025-06-03 08:41:45,633 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 04:41:45] 2025-06-03 08:41:45,636 [wrapper] pilotpid: 1022985
[2025-06-03 04:41:45] 2025-06-03 08:41:45,639 [wrapper] Pilot exit status: 0
[2025-06-03 04:41:45] 2025-06-03 08:41:45,649 [wrapper] pandaids: 6665990322
[2025-06-03 04:41:45] 2025-06-03 08:41:45,749 [wrapper] cleanup supervisor_pilot 1493735 1022986
[2025-06-03 04:41:45] 2025-06-03 08:41:45,753 [wrapper] Test setup, not cleaning
[2025-06-03 04:41:45] 2025-06-03 08:41:45,756 [wrapper] apfmon messages muted
[2025-06-03 04:41:45] 2025-06-03 08:41:45,760 [wrapper] ==== wrapper stdout END ====
[2025-06-03 04:41:45] 2025-06-03 08:41:45,763 [wrapper] ==== wrapper stderr END ====
[2025-06-03 04:41:45]  *** Error codes and diagnostics ***
[2025-06-03 04:41:45]     "exeErrorCode": 0,
[2025-06-03 04:41:45]     "exeErrorDiag": "",
[2025-06-03 04:41:45]     "pilotErrorCode": 0,
[2025-06-03 04:41:45]     "pilotErrorDiag": "",
[2025-06-03 04:41:45]  *** Listing of results directory ***
[2025-06-03 04:41:45] total 412444
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas    495897 May 26 09:12 pilot3.tar.gz
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas      5111 May 26 09:41 queuedata.json
[2025-06-03 04:41:45] -rwx------. 1 boincer umatlas     37140 May 26 09:42 runpilot2-wrapper.sh
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas       100 Jun  3 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 04:41:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 03:10 run_atlas
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas       105 Jun  3 03:10 job.xml
[2025-06-03 04:41:45] -rw-r--r--. 2 boincer umatlas 222267911 Jun  3 03:10 EVNT.44871834._002061.pool.root.1
[2025-06-03 04:41:45] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 03:10 input.tar.gz
[2025-06-03 04:41:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:10 start_atlas.sh
[2025-06-03 04:41:45] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 03:10 shared
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas         0 Jun  3 03:10 boinc_lockfile
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas      2556 Jun  3 03:10 pandaJob.out
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas    986901 Jun  3 03:10 agis_schedconf.cvmfs.json
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas   1603667 Jun  3 03:10 agis_ddmendpoints.agis.ALL.json
[2025-06-03 04:41:45] drwx------. 4 boincer umatlas      4096 Jun  3 03:10 pilot3
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas      6934 Jun  3 04:36 init_data.xml
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas 194599581 Jun  3 04:40 HITS.44871837._051776.pool.root.1
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas       529 Jun  3 04:40 boinc_task_state.xml
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas      1031 Jun  3 04:41 memory_monitor_summary.json
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas    298232 Jun  3 04:41 log.44871837._051776.job.log.tgz.1
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas      7682 Jun  3 04:41 heartbeat.json
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas        95 Jun  3 04:41 pilot_heartbeat.json
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas        27 Jun  3 04:41 wrapper_checkpoint.txt
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 04:41 boinc_mmap_file
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas      4425 Jun  3 04:41 pilotlog.txt
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas    522129 Jun  3 04:41 log.44871837._051776.job.log.1
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas       357 Jun  3 04:41 output.list
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas       620 Jun  3 04:41 runtime_log
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas    839680 Jun  3 04:41 result.tar.gz
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 04:41 runtime_log.err
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas       650 Jun  3 04:41 FYSNDmsGnd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5uWKDmKGVkon.diag
[2025-06-03 04:41:45] -rw-r--r--. 1 boincer umatlas     21330 Jun  3 04:41 stderr.txt
[2025-06-03 04:41:45] HITS file was successfully produced:
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas 194599581 Jun  3 04:40 shared/HITS.pool.root.1
[2025-06-03 04:41:45]  *** Contents of shared directory: ***
[2025-06-03 04:41:45] total 408444
[2025-06-03 04:41:45] -rw-r--r--. 2 boincer umatlas 222267911 Jun  3 03:10 ATLAS.root_0
[2025-06-03 04:41:45] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 03:10 input.tar.gz
[2025-06-03 04:41:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:10 start_atlas.sh
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas 194599581 Jun  3 04:40 HITS.pool.root.1
[2025-06-03 04:41:45] -rw-------. 1 boincer umatlas    839680 Jun  3 04:41 result.tar.gz
04:41:47 (1013815): run_atlas exited; CPU time 37777.237179
04:41:47 (1013815): called boinc_finish(0)

</stderr_txt>
]]>

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