Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:29:37 (19308): wrapper (7.7.26015): starting
18:29:37 (19308): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:29:37] Arguments: --nthreads 8
[2025-06-03 18:29:37] Threads: 8
[2025-06-03 18:29:37] Checking for CVMFS
[2025-06-03 18:29:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:29:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:29:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:29:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:29:39] 2.11.2.0 18542 31997 90680 146746 1 94 22037116 25165825 4496 130560 0 15726871 99.776 18604365 2310 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 18:29:39] CVMFS is ok
[2025-06-03 18:29:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:29:39] Checking for apptainer binary...
[2025-06-03 18:29:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:29:39] Running /usr/bin/apptainer --version
[2025-06-03 18:29:39] apptainer version 1.3.2-1.el7
[2025-06-03 18:29:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:00:05] cg-vwn438.simple-grid.lan
[2025-06-03 19:00:05] apptainer works
[2025-06-03 19:00:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 19:00:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 19:00:05] Starting ATLAS job with PandaID=6677457618
[2025-06-03 19:00:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:05:42]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:05:42] 2025-06-03 20:54:21,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:05:42] 2025-06-03 20:54:23,865 | INFO     | monitor loop #1016: job 0:6677457618 is in state 'finished'
[2025-06-03 23:05:42] 2025-06-03 20:54:23,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:05:42] 2025-06-03 20:54:26,372 | INFO     | monitor loop #1017: job 0:6677457618 is in state 'finished'
[2025-06-03 23:05:42] 2025-06-03 20:54:26,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:05:42] 2025-06-03 20:54:28,880 | INFO     | monitor loop #1018: job 0:6677457618 is in state 'finished'
[2025-06-03 23:05:42] 2025-06-03 20:54:28,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:05:42] 2025-06-03 20:54:30,860 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 23:05:42] 2025-06-03 20:54:30,860 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6677457618/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:05:42] 2025-06-03 20:54:30,861 | INFO     | extracted standard info from prmon json
[2025-06-03 23:05:42] 2025-06-03 20:54:30,861 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:05:42] 2025-06-03 20:54:30,861 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:05:42] 2025-06-03 20:54:30,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:05:42] 2025-06-03 20:54:30,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:05:42] 2025-06-03 20:54:30,867 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:05:42] 2025-06-03 20:54:30,868 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 23:05:42] 2025-06-03 20:54:30,876 | INFO     | sum of deviations: 29096263181.0
[2025-06-03 23:05:42] 2025-06-03 20:54:30,876 | INFO     | mean x: 1748977324.0
[2025-06-03 23:05:42] 2025-06-03 20:54:30,876 | INFO     | mean y: 2457372.3378995433
[2025-06-03 23:05:42] 2025-06-03 20:54:30,877 | INFO     | -- intersect: -15622530245.551315
[2025-06-03 23:05:42] 2025-06-03 20:54:30,877 | INFO     | intersect: -15622530245.551315
[2025-06-03 23:05:42] 2025-06-03 20:54:30,877 | INFO     | chi2: 4.974115617226346
[2025-06-03 23:05:42] 2025-06-03 20:54:30,878 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 23:05:42] 2025-06-03 20:54:30,879 | INFO     | sum of deviations: 42666237262.49998
[2025-06-03 23:05:42] 2025-06-03 20:54:30,880 | INFO     | mean x: 1748977171.5
[2025-06-03 23:05:42] 2025-06-03 20:54:30,880 | INFO     | mean y: 2466679.313084112
[2025-06-03 23:05:42] 2025-06-03 20:54:30,880 | INFO     | -- intersect: -24553567223.705673
[2025-06-03 23:05:42] 2025-06-03 20:54:30,880 | INFO     | intersect: -24553567223.705673
[2025-06-03 23:05:42] 2025-06-03 20:54:30,881 | INFO     | chi2: 4.244497747731603
[2025-06-03 23:05:42] 2025-06-03 20:54:30,881 | INFO     | current chi2=4.244497747731603 (change=14.668293333752278 %)
[2025-06-03 23:05:42] 2025-06-03 20:54:30,881 | INFO     | right removable region: 213
[2025-06-03 23:05:42] 2025-06-03 20:54:30,881 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 23:05:42] 2025-06-03 20:54:30,883 | INFO     | sum of deviations: -39653817349.49999
[2025-06-03 23:05:42] 2025-06-03 20:54:30,884 | INFO     | mean x: 1748977476.5
[2025-06-03 23:05:42] 2025-06-03 20:54:30,884 | INFO     | mean y: 2505352.8457943927
[2025-06-03 23:05:42] 2025-06-03 20:54:30,884 | INFO     | -- intersect: 22824781595.203243
[2025-06-03 23:05:42] 2025-06-03 20:54:30,884 | INFO     | intersect: 22824781595.203243
[2025-06-03 23:05:42] 2025-06-03 20:54:30,884 | INFO     | chi2: 1.0693662408006355
[2025-06-03 23:05:42] 2025-06-03 20:54:30,884 | INFO     | current chi2=1.0693662408006355 (change=78.50137947945542 %)
[2025-06-03 23:05:42] 2025-06-03 20:54:30,885 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 23:05:42] 2025-06-03 20:54:30,887 | INFO     | sum of deviations: -48707666496.00001
[2025-06-03 23:05:42] 2025-06-03 20:54:30,887 | INFO     | mean x: 1748977629.0
[2025-06-03 23:05:42] 2025-06-03 20:54:30,887 | INFO     | mean y: 2511936.5598086123
[2025-06-03 23:05:42] 2025-06-03 20:54:30,887 | INFO     | -- intersect: 30096118475.107056
[2025-06-03 23:05:42] 2025-06-03 20:54:30,887 | INFO     | intersect: 30096118475.107056
[2025-06-03 23:05:42] 2025-06-03 20:54:30,888 | INFO     | chi2: 0.95050789758517
[2025-06-03 23:05:42] 2025-06-03 20:54:30,888 | INFO     | current chi2=0.95050789758517 (change=11.114839676112851 %)
[2025-06-03 23:05:42] 2025-06-03 20:54:30,888 | INFO     | left removable region: 20
[2025-06-03 23:05:42] 2025-06-03 20:54:30,888 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 23:05:42] 2025-06-03 20:54:30,890 | INFO     | sum of deviations: -21313351748.999996
[2025-06-03 23:05:42] 2025-06-03 20:54:30,890 | INFO     | mean x: 1748977751.0
[2025-06-03 23:05:42] 2025-06-03 20:54:30,890 | INFO     | mean y: 2512699.1865284974
[2025-06-03 23:05:42] 2025-06-03 20:54:30,890 | INFO     | -- intersect: 16724864109.750683
[2025-06-03 23:05:42] 2025-06-03 20:54:30,890 | INFO     | intersect: 16724864109.750683
[2025-06-03 23:05:42] 2025-06-03 20:54:30,891 | INFO     | chi2: 0.13112266025334368
[2025-06-03 23:05:42] 2025-06-03 20:54:30,891 | INFO     | -- intersect: 16724864109.750683
[2025-06-03 23:05:42] 2025-06-03 20:54:30,891 | INFO     | current memory leak: -9.56 B/s (using 193 data points, chi2=0.13)
[2025-06-03 23:05:42] 2025-06-03 20:54:30,892 | INFO     | ..............................
[2025-06-03 23:05:42] 2025-06-03 20:54:30,892 | INFO     | . Timing measurements:
[2025-06-03 23:05:42] 2025-06-03 20:54:30,892 | INFO     | . get job = 0 s
[2025-06-03 23:05:42] 2025-06-03 20:54:30,893 | INFO     | . initial setup = 7 s
[2025-06-03 23:05:42] 2025-06-03 20:54:30,893 | INFO     | . payload setup = 133 s
[2025-06-03 23:05:42] 2025-06-03 20:54:30,893 | INFO     | . stage-in = 0 s
[2025-06-03 23:05:42] 2025-06-03 20:54:30,898 | INFO     | . payload execution = 13447 s
[2025-06-03 23:05:42] 2025-06-03 20:54:30,898 | INFO     | . stage-out = 3 s
[2025-06-03 23:05:42] 2025-06-03 20:54:30,898 | INFO     | . log creation = 1 s
[2025-06-03 23:05:42] 2025-06-03 20:54:30,898 | INFO     | ..............................
[2025-06-03 23:05:42] 2025-06-03 20:54:31,462 | INFO     | 
[2025-06-03 23:05:42] 2025-06-03 20:54:31,462 | INFO     | job summary report
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | --------------------------------------------------
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | PanDA job id: 6677457618
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | task id: 45006595
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | errors: (none)
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | pilot state: finished 
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | transexitcode: 0
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | exeerrorcode: 0
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | exeerrordiag: 
[2025-06-03 23:05:42] 2025-06-03 20:54:31,463 | INFO     | exitcode: 0
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | exitmsg: OK
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | cpuconsumptiontime: 48092 s
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | nevents: 400
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | neventsw: 0
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | pid: 17254
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | pgrp: 17254
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | corecount: 8
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | event service: False
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | sizes: {0: 2404954, 1: 2405209, 2: 2405209, 12: 2405237, 23: 2405265, 34: 2405293, 45: 2405449, 55: 2405477, 66: 2405505, 77: 2405533, 87: 2405589, 88: 2406103, 98
[2025-06-03 23:05:42] 2025-06-03 20:54:31,464 | INFO     | --------------------------------------------------
[2025-06-03 23:05:42] 2025-06-03 20:54:31,465 | INFO     | 
[2025-06-03 23:05:42] 2025-06-03 20:54:31,465 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 23:05:42] 2025-06-03 20:54:31,947 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,947 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,947 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,947 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,947 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,947 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,948 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,948 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,948 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,948 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,949 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:05:42] 2025-06-03 20:54:31,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,949 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:05:42] 2025-06-03 20:54:31,949 | INFO     | job 6677457618 has completed (purged errors)
[2025-06-03 23:05:42] 2025-06-03 20:54:31,950 | INFO     | overall cleanup function is called
[2025-06-03 23:05:42] 2025-06-03 20:54:32,958 | INFO     | --- collectZombieJob: --- 10, [17254]
[2025-06-03 23:05:42] 2025-06-03 20:54:32,958 | INFO     | zombie collector waiting for pid 17254
[2025-06-03 23:05:42] 2025-06-03 20:54:32,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:05:42] 2025-06-03 20:54:32,959 | INFO     | collected zombie processes
[2025-06-03 23:05:42] 2025-06-03 20:54:32,959 | INFO     | will attempt to kill all subprocesses of pid=17254
[2025-06-03 23:05:42] 2025-06-03 20:54:33,072 | INFO     | process IDs to be killed: [17254] (in reverse order)
[2025-06-03 23:05:42] 2025-06-03 20:54:33,967 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:05:42] 2025-06-03 20:54:33,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:05:42] 2025-06-03 20:54:33,970 | INFO     | did not find any defunct processes belonging to 17254
[2025-06-03 23:05:42] 2025-06-03 20:54:33,973 | INFO     | did not find any defunct processes belonging to 17254
[2025-06-03 23:05:42] 2025-06-03 20:54:33,974 | INFO     | ready for new job
[2025-06-03 23:05:42] 2025-06-03 20:54:33,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:05:42] 2025-06-03 20:54:33,976 | INFO     | **************************************
[2025-06-03 23:05:42] 2025-06-03 20:54:33,976 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:05:42] 2025-06-03 20:54:33,976 | INFO     | **************************************
[2025-06-03 23:05:42] 2025-06-03 20:54:33,976 | INFO     | 
[2025-06-03 23:05:42] 2025-06-03 20:54:33,977 | INFO     | pilot is running in a VM
[2025-06-03 23:05:42] 2025-06-03 20:54:33,977 | INFO     | architecture information:
[2025-06-03 23:05:42] 2025-06-03 20:54:33,980 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:05:42] 2025-06-03 20:54:34,232 | INFO     | cat /etc/os-release:
[2025-06-03 23:05:42] NAME="CentOS Linux"
[2025-06-03 23:05:42] VERSION="7 (Core)"
[2025-06-03 23:05:42] ID="centos"
[2025-06-03 23:05:42] ID_LIKE="rhel fedora"
[2025-06-03 23:05:42] VERSION_ID="7"
[2025-06-03 23:05:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:05:42] ANSI_COLOR="0;31"
[2025-06-03 23:05:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:05:42] HOME_URL="https://www.centos.org/"
[2025-06-03 23:05:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:05:42] 
[2025-06-03 23:05:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:05:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:05:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:05:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:05:42] 
[2025-06-03 23:05:42] 2025-06-03 20:54:34,233 | INFO     | **************************************
[2025-06-03 23:05:42] 2025-06-03 20:54:34,738 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 23:05:42] 2025-06-03 20:54:34,956 | INFO     | sufficient remaining disk space (496500736000 B)
[2025-06-03 23:05:42] 2025-06-03 20:54:34,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:05:42] 2025-06-03 20:54:34,956 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:05:42] 2025-06-03 20:54:34,956 | INFO     | update_server=False
[2025-06-03 23:05:42] 2025-06-03 20:54:34,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:05:42] 2025-06-03 20:54:34,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:05:42] 2025-06-03 20:54:34,957 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:05:42] 2025-06-03 20:54:34,957 | INFO     | aborting loop
[2025-06-03 23:05:42] 2025-06-03 20:54:35,080 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:05:42] 2025-06-03 20:54:35,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:05:42] 2025-06-03 20:54:35,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:05:42] 2025-06-03 20:54:35,290 | INFO     | all data control threads have been joined
[2025-06-03 23:05:42] 2025-06-03 20:54:35,317 | INFO     | all payload control threads have been joined
[2025-06-03 23:05:42] 2025-06-03 20:54:35,962 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:35,963 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:35,991 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:36,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:05:42] 2025-06-03 20:54:36,296 | INFO     | [data] control thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:36,323 | INFO     | [payload] control thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:36,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:05:42] 2025-06-03 20:54:36,506 | INFO     | all job control threads have been joined
[2025-06-03 23:05:42] 2025-06-03 20:54:36,553 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:36,735 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:36,736 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:36,743 | INFO     | [job] validate thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:36,964 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:37,101 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:37,165 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:37,319 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:37,446 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:37,512 | INFO     | [job] control thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:40,427 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:05:42] 2025-06-03 20:54:41,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845040211776)>', '<ExcThread(monitor, started 139844445521664)>']
[2025-06-03 23:05:42] 2025-06-03 20:54:42,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:05:42] 2025-06-03 20:54:42,121 | INFO     | [monitor] control thread has ended
[2025-06-03 23:05:42] 2025-06-03 20:54:46,559 | INFO     | all workflow threads have been joined
[2025-06-03 23:05:42] 2025-06-03 20:54:46,559 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:05:42] 2025-06-03 20:54:46,560 | INFO     | traces error code: 0
[2025-06-03 23:05:42] 2025-06-03 20:54:46,560 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:05:42] 2025-06-03 20:54:47,042 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:05:42] 2025-06-03 20:54:47,154 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:05:42] 2025-06-03 20:54:47,300 [wrapper] pilotpid: 8624
[2025-06-03 23:05:42] 2025-06-03 20:54:47,378 [wrapper] Pilot exit status: 0
[2025-06-03 23:05:42] 2025-06-03 20:54:47,891 [wrapper] pandaids: 6677457618
[2025-06-03 23:05:42] 2025-06-03 20:54:48,697 [wrapper] cleanup supervisor_pilot 15291 8625
[2025-06-03 23:05:42] 2025-06-03 20:54:48,769 [wrapper] Test setup, not cleaning
[2025-06-03 23:05:42] 2025-06-03 20:54:48,782 [wrapper] apfmon messages muted
[2025-06-03 23:05:42] 2025-06-03 20:54:48,791 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:05:42] 2025-06-03 20:54:48,800 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:05:42]  *** Error codes and diagnostics ***
[2025-06-03 23:05:42]     "exeErrorCode": 0,
[2025-06-03 23:05:42]     "exeErrorDiag": "",
[2025-06-03 23:05:42]     "pilotErrorCode": 0,
[2025-06-03 23:05:42]     "pilotErrorDiag": "",
[2025-06-03 23:05:42]  *** Listing of results directory ***
[2025-06-03 23:05:42] total 389488
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc    495897 Jun  3 06:08 pilot3.tar.gz
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc      5111 Jun  3 06:17 queuedata.json
[2025-06-03 23:05:42] -rwx------. 1 boinc boinc     37140 Jun  3 06:17 runpilot2-wrapper.sh
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc       100 Jun  3 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:05:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 18:29 run_atlas
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc       105 Jun  3 18:29 job.xml
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc      6392 Jun  3 18:29 init_data.xml
[2025-06-03 23:05:42] -rw-r--r--. 2 boinc boinc 219038417 Jun  3 18:29 EVNT.45006593._000773.pool.root.1
[2025-06-03 23:05:42] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:29 start_atlas.sh
[2025-06-03 23:05:42] drwxrwx--x. 2 boinc boinc        68 Jun  3 18:29 shared
[2025-06-03 23:05:42] -rw-r--r--. 2 boinc boinc    508873 Jun  3 18:29 input.tar.gz
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc         0 Jun  3 18:29 boinc_lockfile
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc      2523 Jun  3 19:00 pandaJob.out
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc    983734 Jun  3 19:03 agis_schedconf.cvmfs.json
[2025-06-03 23:05:42] drwx------. 4 boinc boinc      4096 Jun  3 19:03 pilot3
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc 172841276 Jun  3 22:51 HITS.45006595._019313.pool.root.1
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc       531 Jun  3 22:51 boinc_task_state.xml
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc      1018 Jun  3 22:52 memory_monitor_summary.json
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc   1603667 Jun  3 22:53 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc    379505 Jun  3 22:53 log.45006595._019313.job.log.tgz.1
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc        95 Jun  3 22:53 pilot_heartbeat.json
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc      7694 Jun  3 22:54 heartbeat.json
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc      4416 Jun  3 22:54 pilotlog.txt
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc   1186363 Jun  3 22:54 log.45006595._019313.job.log.1
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc       357 Jun  3 22:54 output.list
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc       620 Jun  3 22:54 runtime_log
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc   1587200 Jun  3 22:54 result.tar.gz
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc      8659 Jun  3 22:54 runtime_log.err
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc       657 Jun  3 22:54 do5LDmKGYg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdLXKDm6EG7Xn.diag
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:05 boinc_mmap_file
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc        28 Jun  3 23:05 wrapper_checkpoint.txt
[2025-06-03 23:05:42] -rw-r--r--. 1 boinc boinc     20799 Jun  3 23:05 stderr.txt
[2025-06-03 23:05:42] HITS file was successfully produced:
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc 172841276 Jun  3 22:51 shared/HITS.pool.root.1
[2025-06-03 23:05:42]  *** Contents of shared directory: ***
[2025-06-03 23:05:42] total 384768
[2025-06-03 23:05:42] -rw-r--r--. 2 boinc boinc 219038417 Jun  3 18:29 ATLAS.root_0
[2025-06-03 23:05:42] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:29 start_atlas.sh
[2025-06-03 23:05:42] -rw-r--r--. 2 boinc boinc    508873 Jun  3 18:29 input.tar.gz
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc 172841276 Jun  3 22:51 HITS.pool.root.1
[2025-06-03 23:05:42] -rw-------. 1 boinc boinc   1587200 Jun  3 22:54 result.tar.gz
23:05:44 (19308): run_atlas exited; CPU time 48277.341161
23:05:44 (19308): called boinc_finish(0)

</stderr_txt>
]]>

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