Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:35:59 (4321): wrapper (7.7.26015): starting
15:35:59 (4321): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:35:59] Arguments: --nthreads 8
[2025-06-03 15:35:59] Threads: 8
[2025-06-03 15:35:59] Checking for CVMFS
[2025-06-03 15:35:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:36:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:36:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:36:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:36:00] 2.11.2.0 22848 31962 101480 146743 0 114 17467071 25165824 4353 130560 0 16863995 99.832 17275213 2503 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:36:00] CVMFS is ok
[2025-06-03 15:36:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:36:00] Checking for apptainer binary...
[2025-06-03 15:36:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:36:00] Running /usr/bin/apptainer --version
[2025-06-03 15:36:00] apptainer version 1.3.2-1.el7
[2025-06-03 15:36:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:36:02] cg-vwn482.simple-grid.lan
[2025-06-03 15:36:02] apptainer works
[2025-06-03 15:36:02] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:36:02] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:36:02] Starting ATLAS job with PandaID=6677456496
[2025-06-03 15:36:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:03:56]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:03:56] 2025-06-03 17:01:15,405 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:03:56] 2025-06-03 17:01:15,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:03:56] 2025-06-03 17:01:15,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:03:56] 2025-06-03 17:01:15,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:03:56] 2025-06-03 17:01:15,410 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:03:56] 2025-06-03 17:01:15,410 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,412 | INFO     | sum of deviations: -52537723577.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,412 | INFO     | mean x: 1748963905.5
[2025-06-03 20:03:56] 2025-06-03 17:01:15,412 | INFO     | mean y: 2592576.83
[2025-06-03 20:03:56] 2025-06-03 17:01:15,412 | INFO     | -- intersect: 37044602561.49618
[2025-06-03 20:03:56] 2025-06-03 17:01:15,412 | INFO     | intersect: 37044602561.49618
[2025-06-03 20:03:56] 2025-06-03 17:01:15,413 | INFO     | chi2: 2.606339307855206
[2025-06-03 20:03:56] 2025-06-03 17:01:15,413 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,414 | INFO     | sum of deviations: -36041890565.00001
[2025-06-03 20:03:56] 2025-06-03 17:01:15,415 | INFO     | mean x: 1748963753.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,415 | INFO     | mean y: 2606219.7435897435
[2025-06-03 20:03:56] 2025-06-03 17:01:15,415 | INFO     | -- intersect: 27419454953.78655
[2025-06-03 20:03:56] 2025-06-03 17:01:15,415 | INFO     | intersect: 27419454953.78655
[2025-06-03 20:03:56] 2025-06-03 17:01:15,415 | INFO     | chi2: 1.842841195195749
[2025-06-03 20:03:56] 2025-06-03 17:01:15,416 | INFO     | current chi2=1.842841195195749 (change=29.29388780495163 %)
[2025-06-03 20:03:56] 2025-06-03 17:01:15,416 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 20:03:56] 2025-06-03 17:01:15,417 | INFO     | sum of deviations: -32793589599.500004
[2025-06-03 20:03:56] 2025-06-03 17:01:15,417 | INFO     | mean x: 1748963600.5
[2025-06-03 20:03:56] 2025-06-03 17:01:15,417 | INFO     | mean y: 2609094.3
[2025-06-03 20:03:56] 2025-06-03 17:01:15,418 | INFO     | -- intersect: 26970223634.054134
[2025-06-03 20:03:56] 2025-06-03 17:01:15,418 | INFO     | intersect: 26970223634.054134
[2025-06-03 20:03:56] 2025-06-03 17:01:15,418 | INFO     | chi2: 1.843754561994094
[2025-06-03 20:03:56] 2025-06-03 17:01:15,418 | INFO     | current chi2=1.843754561994094 (change=-0.049562968351592185 %)
[2025-06-03 20:03:56] 2025-06-03 17:01:15,418 | INFO     | right removable region: 189
[2025-06-03 20:03:56] 2025-06-03 17:01:15,419 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,420 | INFO     | sum of deviations: -86291313517.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,420 | INFO     | mean x: 1748964058.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,420 | INFO     | mean y: 2620660.292307692
[2025-06-03 20:03:56] 2025-06-03 17:01:15,421 | INFO     | -- intersect: 65643913756.903915
[2025-06-03 20:03:56] 2025-06-03 17:01:15,421 | INFO     | intersect: 65643913756.903915
[2025-06-03 20:03:56] 2025-06-03 17:01:15,421 | INFO     | chi2: 1.0026484888897906
[2025-06-03 20:03:56] 2025-06-03 17:01:15,421 | INFO     | current chi2=1.0026484888897906 (change=61.53039299726157 %)
[2025-06-03 20:03:56] 2025-06-03 17:01:15,421 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 20:03:56] 2025-06-03 17:01:15,423 | INFO     | sum of deviations: -87278651160.00002
[2025-06-03 20:03:56] 2025-06-03 17:01:15,423 | INFO     | mean x: 1748964210.5
[2025-06-03 20:03:56] 2025-06-03 17:01:15,423 | INFO     | mean y: 2621486.547368421
[2025-06-03 20:03:56] 2025-06-03 17:01:15,423 | INFO     | -- intersect: 71775729331.56766
[2025-06-03 20:03:56] 2025-06-03 17:01:15,423 | INFO     | intersect: 71775729331.56766
[2025-06-03 20:03:56] 2025-06-03 17:01:15,424 | INFO     | chi2: 0.9533941144980205
[2025-06-03 20:03:56] 2025-06-03 17:01:15,424 | INFO     | current chi2=0.9533941144980205 (change=4.91242693102828 %)
[2025-06-03 20:03:56] 2025-06-03 17:01:15,424 | INFO     | left removable region: 20
[2025-06-03 20:03:56] 2025-06-03 17:01:15,424 | INFO     | sum of square deviations: 1496660620.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,425 | INFO     | sum of deviations: -60748185168.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,425 | INFO     | mean x: 1748964180.0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,426 | INFO     | mean y: 2635593.023668639
[2025-06-03 20:03:56] 2025-06-03 17:01:15,426 | INFO     | -- intersect: 70991608269.30032
[2025-06-03 20:03:56] 2025-06-03 17:01:15,426 | INFO     | intersect: 70991608269.30032
[2025-06-03 20:03:56] 2025-06-03 17:01:15,426 | INFO     | chi2: 0.14555548817224012
[2025-06-03 20:03:56] 2025-06-03 17:01:15,426 | INFO     | -- intersect: 70991608269.30032
[2025-06-03 20:03:56] 2025-06-03 17:01:15,426 | INFO     | current memory leak: -40.59 B/s (using 169 data points, chi2=0.15)
[2025-06-03 20:03:56] 2025-06-03 17:01:15,427 | INFO     | ..............................
[2025-06-03 20:03:56] 2025-06-03 17:01:15,428 | INFO     | . Timing measurements:
[2025-06-03 20:03:56] 2025-06-03 17:01:15,428 | INFO     | . get job = 0 s
[2025-06-03 20:03:56] 2025-06-03 17:01:15,428 | INFO     | . initial setup = 2 s
[2025-06-03 20:03:56] 2025-06-03 17:01:15,428 | INFO     | . payload setup = 14 s
[2025-06-03 20:03:56] 2025-06-03 17:01:15,428 | INFO     | . stage-in = 0 s
[2025-06-03 20:03:56] 2025-06-03 17:01:15,428 | INFO     | . payload execution = 12162 s
[2025-06-03 20:03:56] 2025-06-03 17:01:15,428 | INFO     | . stage-out = 3 s
[2025-06-03 20:03:56] 2025-06-03 17:01:15,428 | INFO     | . log creation = 1 s
[2025-06-03 20:03:56] 2025-06-03 17:01:15,428 | INFO     | ..............................
[2025-06-03 20:03:56] 2025-06-03 17:01:15,549 | INFO     | 
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | job summary report
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | --------------------------------------------------
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | PanDA job id: 6677456496
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | task id: 45006595
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | errors: (none)
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | pilot state: finished 
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | transexitcode: 0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | exeerrorcode: 0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,550 | INFO     | exeerrordiag: 
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | exitcode: 0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | exitmsg: OK
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | cpuconsumptiontime: 45198 s
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | nevents: 400
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | neventsw: 0
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | pid: 16227
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | pgrp: 16227
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | corecount: 8
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | event service: False
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | sizes: {0: 2405180, 1: 2405180, 7: 2405414, 11: 2405442, 12180: 2434427, 12184: 2443368, 12188: 2443552, 12275: 2443722}
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | --------------------------------------------------
[2025-06-03 20:03:56] 2025-06-03 17:01:15,551 | INFO     | 
[2025-06-03 20:03:56] 2025-06-03 17:01:15,552 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-03 20:03:56] 2025-06-03 17:01:15,916 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,917 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:03:56] 2025-06-03 17:01:15,918 | INFO     | job 6677456496 has completed (purged errors)
[2025-06-03 20:03:56] 2025-06-03 17:01:15,918 | INFO     | overall cleanup function is called
[2025-06-03 20:03:56] 2025-06-03 17:01:16,927 | INFO     | --- collectZombieJob: --- 10, [16227]
[2025-06-03 20:03:56] 2025-06-03 17:01:16,927 | INFO     | zombie collector waiting for pid 16227
[2025-06-03 20:03:56] 2025-06-03 17:01:16,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:03:56] 2025-06-03 17:01:16,927 | INFO     | collected zombie processes
[2025-06-03 20:03:56] 2025-06-03 17:01:16,927 | INFO     | will attempt to kill all subprocesses of pid=16227
[2025-06-03 20:03:56] 2025-06-03 17:01:17,033 | INFO     | process IDs to be killed: [16227] (in reverse order)
[2025-06-03 20:03:56] 2025-06-03 17:01:17,090 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:03:56] 2025-06-03 17:01:17,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:03:56] 2025-06-03 17:01:17,094 | INFO     | did not find any defunct processes belonging to 16227
[2025-06-03 20:03:56] 2025-06-03 17:01:17,096 | INFO     | did not find any defunct processes belonging to 16227
[2025-06-03 20:03:56] 2025-06-03 17:01:17,096 | INFO     | ready for new job
[2025-06-03 20:03:56] 2025-06-03 17:01:17,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:03:56] 2025-06-03 17:01:17,098 | INFO     | **************************************
[2025-06-03 20:03:56] 2025-06-03 17:01:17,098 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:03:56] 2025-06-03 17:01:17,098 | INFO     | **************************************
[2025-06-03 20:03:56] 2025-06-03 17:01:17,098 | INFO     | 
[2025-06-03 20:03:56] 2025-06-03 17:01:17,099 | INFO     | pilot is running in a VM
[2025-06-03 20:03:56] 2025-06-03 17:01:17,099 | INFO     | architecture information:
[2025-06-03 20:03:56] 2025-06-03 17:01:17,100 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:03:56] 2025-06-03 17:01:17,297 | INFO     | cat /etc/os-release:
[2025-06-03 20:03:56] NAME="CentOS Linux"
[2025-06-03 20:03:56] VERSION="7 (Core)"
[2025-06-03 20:03:56] ID="centos"
[2025-06-03 20:03:56] ID_LIKE="rhel fedora"
[2025-06-03 20:03:56] VERSION_ID="7"
[2025-06-03 20:03:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:03:56] ANSI_COLOR="0;31"
[2025-06-03 20:03:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:03:56] HOME_URL="https://www.centos.org/"
[2025-06-03 20:03:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:03:56] 
[2025-06-03 20:03:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:03:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:03:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:03:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:03:56] 
[2025-06-03 20:03:56] 2025-06-03 17:01:17,297 | INFO     | **************************************
[2025-06-03 20:03:56] 2025-06-03 17:01:17,799 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-03 20:03:56] 2025-06-03 17:01:18,111 | INFO     | sufficient remaining disk space (496724082688 B)
[2025-06-03 20:03:56] 2025-06-03 17:01:18,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:03:56] 2025-06-03 17:01:18,112 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:03:56] 2025-06-03 17:01:18,112 | INFO     | update_server=False
[2025-06-03 20:03:56] 2025-06-03 17:01:18,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:03:56] 2025-06-03 17:01:18,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:03:56] 2025-06-03 17:01:18,113 | INFO     | aborting loop
[2025-06-03 20:03:56] 2025-06-03 17:01:18,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:03:56] 2025-06-03 17:01:18,172 | INFO     | PID=8377 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 20:03:56] 2025-06-03 17:01:18,173 | INFO     | .. there are 9 such processes running
[2025-06-03 20:03:56] 2025-06-03 17:01:18,173 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:03:56] 2025-06-03 17:01:18,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:03:56] 2025-06-03 17:01:18,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:03:56] 2025-06-03 17:01:18,573 | INFO     | all data control threads have been joined
[2025-06-03 20:03:56] 2025-06-03 17:01:19,118 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:19,118 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:19,153 | INFO     | all job control threads have been joined
[2025-06-03 20:03:56] 2025-06-03 17:01:19,164 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:19,180 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:19,384 | INFO     | all payload control threads have been joined
[2025-06-03 20:03:56] 2025-06-03 17:01:19,579 | INFO     | [data] control thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:19,682 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:19,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:03:56] 2025-06-03 17:01:19,821 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:19,975 | INFO     | [job] validate thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:20,063 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:20,122 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:20,159 | INFO     | [job] control thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:20,166 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:20,387 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:20,390 | INFO     | [payload] control thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:20,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:03:56] 2025-06-03 17:01:21,570 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:23,749 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:03:56] 2025-06-03 17:01:24,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052735514432)>', '<ExcThread(monitor, started 140052164241152)>']
[2025-06-03 20:03:56] 2025-06-03 17:01:25,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:03:56] 2025-06-03 17:01:25,214 | INFO     | [monitor] control thread has ended
[2025-06-03 20:03:56] 2025-06-03 17:01:29,939 | INFO     | all workflow threads have been joined
[2025-06-03 20:03:56] 2025-06-03 17:01:29,939 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:03:56] 2025-06-03 17:01:29,939 | INFO     | traces error code: 0
[2025-06-03 20:03:56] 2025-06-03 17:01:29,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:03:56] 2025-06-03 17:01:30,421 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:03:56] 2025-06-03 17:01:30,508 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:03:56] 2025-06-03 17:01:30,597 [wrapper] pilotpid: 8377
[2025-06-03 20:03:56] 2025-06-03 17:01:30,667 [wrapper] Pilot exit status: 0
[2025-06-03 20:03:56] 2025-06-03 17:01:30,997 [wrapper] pandaids: 6677456496
[2025-06-03 20:03:56] 2025-06-03 17:01:31,698 [wrapper] cleanup supervisor_pilot 15973 8378
[2025-06-03 20:03:56] 2025-06-03 17:01:31,758 [wrapper] Test setup, not cleaning
[2025-06-03 20:03:56] 2025-06-03 17:01:31,820 [wrapper] apfmon messages muted
[2025-06-03 20:03:56] 2025-06-03 17:01:31,938 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:03:56] 2025-06-03 17:01:32,042 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:03:56]  *** Error codes and diagnostics ***
[2025-06-03 20:03:56]     "exeErrorCode": 0,
[2025-06-03 20:03:56]     "exeErrorDiag": "",
[2025-06-03 20:03:56]     "pilotErrorCode": 0,
[2025-06-03 20:03:56]     "pilotErrorDiag": "",
[2025-06-03 20:03:56]  *** Listing of results directory ***
[2025-06-03 20:03:56] total 389936
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc    495897 Jun  3 05:41 pilot3.tar.gz
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc      5111 Jun  3 06:05 queuedata.json
[2025-06-03 20:03:56] -rwx------. 1 boinc boinc     37140 Jun  3 06:08 runpilot2-wrapper.sh
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:03:56] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:35 run_atlas
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:35 job.xml
[2025-06-03 20:03:56] -rw-r--r--. 2 boinc boinc 215808174 Jun  3 15:35 EVNT.45006593._000760.pool.root.1
[2025-06-03 20:03:56] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:35 start_atlas.sh
[2025-06-03 20:03:56] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:35 shared
[2025-06-03 20:03:56] -rw-r--r--. 2 boinc boinc    508882 Jun  3 15:35 input.tar.gz
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc      6391 Jun  3 15:35 init_data.xml
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:35 boinc_lockfile
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc      2523 Jun  3 15:36 pandaJob.out
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc    982724 Jun  3 15:36 agis_schedconf.cvmfs.json
[2025-06-03 20:03:56] drwx------. 4 boinc boinc      4096 Jun  3 15:36 pilot3
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc 176816685 Jun  3 18:58 HITS.45006595._018981.pool.root.1
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc       530 Jun  3 18:58 boinc_task_state.xml
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc      1021 Jun  3 18:59 memory_monitor_summary.json
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc   1603667 Jun  3 18:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc    358258 Jun  3 18:59 log.45006595._018981.job.log.tgz.1
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc      7694 Jun  3 19:01 heartbeat.json
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc        95 Jun  3 19:01 pilot_heartbeat.json
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc      4807 Jun  3 19:01 pilotlog.txt
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc   1067842 Jun  3 19:01 log.45006595._018981.job.log.1
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc       357 Jun  3 19:01 output.list
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:01 runtime_log
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc   1443840 Jun  3 19:01 result.tar.gz
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc       656 Jun  3 19:01 xBoNDm77Xg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEKXKDmfS9fEm.diag
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc      8659 Jun  3 19:01 runtime_log.err
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:03 boinc_mmap_file
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:03 wrapper_checkpoint.txt
[2025-06-03 20:03:56] -rw-r--r--. 1 boinc boinc     20518 Jun  3 20:03 stderr.txt
[2025-06-03 20:03:56] HITS file was successfully produced:
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc 176816685 Jun  3 18:58 shared/HITS.pool.root.1
[2025-06-03 20:03:56]  *** Contents of shared directory: ***
[2025-06-03 20:03:56] total 385356
[2025-06-03 20:03:56] -rw-r--r--. 2 boinc boinc 215808174 Jun  3 15:35 ATLAS.root_0
[2025-06-03 20:03:56] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:35 start_atlas.sh
[2025-06-03 20:03:56] -rw-r--r--. 2 boinc boinc    508882 Jun  3 15:35 input.tar.gz
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc 176816685 Jun  3 18:58 HITS.pool.root.1
[2025-06-03 20:03:56] -rw-------. 1 boinc boinc   1443840 Jun  3 19:01 result.tar.gz
20:03:58 (4321): run_atlas exited; CPU time 45337.676482
20:03:58 (4321): called boinc_finish(0)

</stderr_txt>
]]>

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