Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:03:36 (518815): wrapper (7.7.26015): starting
01:03:36 (518815): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 01:03:36] Arguments: --nthreads 4
[2025-06-05 01:03:36] Threads: 4
[2025-06-05 01:03:36] Checking for CVMFS
[2025-06-05 01:03:36] No cvmfs_config command found, will try listing directly
[2025-06-05 01:03:36] CVMFS is ok
[2025-06-05 01:03:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:03:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:03:36] Further information can be found at the LHC@home message board.
[2025-06-05 01:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:03:36] Checking for apptainer binary...
[2025-06-05 01:03:36] which: no apptainer in ((null))
[2025-06-05 01:03:36] apptainer is not installed, using version from CVMFS
[2025-06-05 01:03:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:03:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-06-05 01:03:36] apptainer works
[2025-06-05 01:03:36] Set ATHENA_PROC_NUMBER=4
[2025-06-05 01:03:36] Set ATHENA_CORE_NUMBER=4
[2025-06-05 01:03:36] Starting ATLAS job with PandaID=6677455872
[2025-06-05 01:03:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:44:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:44:26] 2025-06-05 01:42:46,810 | INFO     | sum of deviations: 17360342945.999996
[2025-06-05 03:44:26] 2025-06-05 01:42:46,810 | INFO     | mean x: 1749082828.0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,811 | INFO     | mean y: 2306216.821192053
[2025-06-05 03:44:26] 2025-06-05 01:42:46,811 | INFO     | -- intersect: -28440893973.66974
[2025-06-05 03:44:26] 2025-06-05 01:42:46,811 | INFO     | intersect: -28440893973.66974
[2025-06-05 03:44:26] 2025-06-05 01:42:46,811 | INFO     | chi2: 1.5235152871530104
[2025-06-05 03:44:26] 2025-06-05 01:42:46,811 | INFO     | current chi2=1.5235152871530104 (change=-0.11491912632796085 %)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,811 | INFO     | right removable region: 150
[2025-06-05 03:44:26] 2025-06-05 01:42:46,812 | INFO     | sum of square deviations: 1067554900.0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,813 | INFO     | sum of deviations: -2975718896.9999986
[2025-06-05 03:44:26] 2025-06-05 01:42:46,813 | INFO     | mean x: 1749083133.0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,813 | INFO     | mean y: 2336374.3509933776
[2025-06-05 03:44:26] 2025-06-05 01:42:46,813 | INFO     | -- intersect: 4877757517.836974
[2025-06-05 03:44:26] 2025-06-05 01:42:46,813 | INFO     | intersect: 4877757517.836974
[2025-06-05 03:44:26] 2025-06-05 01:42:46,814 | INFO     | chi2: 0.08704534224162559
[2025-06-05 03:44:26] 2025-06-05 01:42:46,814 | INFO     | current chi2=0.08704534224162559 (change=94.2799803373626 %)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,814 | INFO     | sum of square deviations: 964976232.5
[2025-06-05 03:44:26] 2025-06-05 01:42:46,815 | INFO     | sum of deviations: 3766487181.499998
[2025-06-05 03:44:26] 2025-06-05 01:42:46,815 | INFO     | mean x: 1749083285.5
[2025-06-05 03:44:26] 2025-06-05 01:42:46,815 | INFO     | mean y: 2326307.7191780824
[2025-06-05 03:44:26] 2025-06-05 01:42:46,815 | INFO     | -- intersect: -6824680982.547582
[2025-06-05 03:44:26] 2025-06-05 01:42:46,815 | INFO     | intersect: -6824680982.547582
[2025-06-05 03:44:26] 2025-06-05 01:42:46,816 | INFO     | chi2: 0.0006391206303749894
[2025-06-05 03:44:26] 2025-06-05 01:42:46,816 | INFO     | current chi2=0.0006391206303749894 (change=99.26576125279526 %)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,816 | INFO     | sum of square deviations: 869188390.0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,817 | INFO     | sum of deviations: 3113706996.9999995
[2025-06-05 03:44:26] 2025-06-05 01:42:46,817 | INFO     | mean x: 1749083438.0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,818 | INFO     | mean y: 2327341.1985815605
[2025-06-05 03:44:26] 2025-06-05 01:42:46,818 | INFO     | -- intersect: -6263441279.154729
[2025-06-05 03:44:26] 2025-06-05 01:42:46,818 | INFO     | intersect: -6263441279.154729
[2025-06-05 03:44:26] 2025-06-05 01:42:46,818 | INFO     | chi2: 0.00039786475138254754
[2025-06-05 03:44:26] 2025-06-05 01:42:46,818 | INFO     | current chi2=0.00039786475138254754 (change=37.74809754629427 %)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,818 | INFO     | sum of square deviations: 779958810.0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,819 | INFO     | sum of deviations: 2784262345.0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,819 | INFO     | mean x: 1749083590.5
[2025-06-05 03:44:26] 2025-06-05 01:42:46,820 | INFO     | mean y: 2327903.720588235
[2025-06-05 03:44:26] 2025-06-05 01:42:46,820 | INFO     | -- intersect: -6241473072.49577
[2025-06-05 03:44:26] 2025-06-05 01:42:46,820 | INFO     | intersect: -6241473072.49577
[2025-06-05 03:44:26] 2025-06-05 01:42:46,820 | INFO     | chi2: 0.0003961516678588909
[2025-06-05 03:44:26] 2025-06-05 01:42:46,820 | INFO     | current chi2=0.0003961516678588909 (change=0.43056931223583794 %)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,820 | INFO     | left removable region: 40
[2025-06-05 03:44:26] 2025-06-05 01:42:46,821 | INFO     | sum of square deviations: 412686807.5
[2025-06-05 03:44:26] 2025-06-05 01:42:46,821 | INFO     | sum of deviations: 1197210003.4999998
[2025-06-05 03:44:26] 2025-06-05 01:42:46,821 | INFO     | mean x: 1749084017.5
[2025-06-05 03:44:26] 2025-06-05 01:42:46,822 | INFO     | mean y: 2329960.0272727273
[2025-06-05 03:44:26] 2025-06-05 01:42:46,822 | INFO     | -- intersect: -5071786402.931503
[2025-06-05 03:44:26] 2025-06-05 01:42:46,822 | INFO     | intersect: -5071786402.931503
[2025-06-05 03:44:26] 2025-06-05 01:42:46,822 | INFO     | chi2: 0.00028347775495196886
[2025-06-05 03:44:26] 2025-06-05 01:42:46,822 | INFO     | -- intersect: -5071786402.931503
[2025-06-05 03:44:26] 2025-06-05 01:42:46,822 | INFO     | current memory leak: 2.90 B/s (using 110 data points, chi2=0.00)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,823 | INFO     | ..............................
[2025-06-05 03:44:26] 2025-06-05 01:42:46,823 | INFO     | . Timing measurements:
[2025-06-05 03:44:26] 2025-06-05 01:42:46,823 | INFO     | . get job = 0 s
[2025-06-05 03:44:26] 2025-06-05 01:42:46,823 | INFO     | . initial setup = 1 s
[2025-06-05 03:44:26] 2025-06-05 01:42:46,824 | INFO     | . payload setup = 7 s
[2025-06-05 03:44:26] 2025-06-05 01:42:46,824 | INFO     | . stage-in = 0 s
[2025-06-05 03:44:26] 2025-06-05 01:42:46,824 | INFO     | . payload execution = 9509 s
[2025-06-05 03:44:26] 2025-06-05 01:42:46,824 | INFO     | . stage-out = 0 s
[2025-06-05 03:44:26] 2025-06-05 01:42:46,824 | INFO     | . log creation = 0 s
[2025-06-05 03:44:26] 2025-06-05 01:42:46,824 | INFO     | ..............................
[2025-06-05 03:44:26] 2025-06-05 01:42:46,866 | INFO     | size of work directory /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6677455872: 2726690 B (within 2537553920 B limit)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,892 | INFO     | pfn file=/scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6677455872/HITS.45006595._018766.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,903 | INFO     | total size of present files: 0 B (workdir size: 2726690 B)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,913 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6677455872/HITS.45006595._018766.pool.root.1 since it does not exist
[2025-06-05 03:44:26] 2025-06-05 01:42:46,946 | INFO     | 
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | job summary report
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | --------------------------------------------------
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | PanDA job id: 6677455872
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | task id: 45006595
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | errors: (none)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | pilot state: finished 
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | transexitcode: 0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | exeerrorcode: 0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | exeerrordiag: 
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | exitcode: 0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,947 | INFO     | exitmsg: OK
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | cpuconsumptiontime: 36279 s
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | nevents: 400
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | neventsw: 0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | pid: 529570
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | pgrp: 529570
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | corecount: 4
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | event service: False
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | sizes: {0: 2397351, 5: 2397557, 11: 2397613, 9520: 2425761, 9521: 2425760, 9522: 2434963, 9526: 2435105}
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | --------------------------------------------------
[2025-06-05 03:44:26] 2025-06-05 01:42:46,948 | INFO     | 
[2025-06-05 03:44:26] 2025-06-05 01:42:46,949 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-06-05 03:44:26] 2025-06-05 01:42:46,969 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:44:26] 2025-06-05 01:42:46,972 | INFO     | job 6677455872 has completed (purged errors)
[2025-06-05 03:44:26] 2025-06-05 01:42:46,972 | INFO     | overall cleanup function is called
[2025-06-05 03:44:26] 2025-06-05 01:42:47,318 | INFO     | number of running child processes to parent process 529570: 1
[2025-06-05 03:44:26] 2025-06-05 01:42:47,318 | INFO     | maximum number of monitored processes: 6
[2025-06-05 03:44:26] 2025-06-05 01:42:47,318 | INFO     | aborting job monitoring since job object (job id=6677455872) has expired
[2025-06-05 03:44:26] 2025-06-05 01:42:47,981 | INFO     | --- collectZombieJob: --- 10, [529570]
[2025-06-05 03:44:26] 2025-06-05 01:42:47,981 | INFO     | zombie collector waiting for pid 529570
[2025-06-05 03:44:26] 2025-06-05 01:42:47,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:44:26] 2025-06-05 01:42:47,981 | INFO     | collected zombie processes
[2025-06-05 03:44:26] 2025-06-05 01:42:47,981 | INFO     | will attempt to kill all subprocesses of pid=529570
[2025-06-05 03:44:26] 2025-06-05 01:42:48,337 | INFO     | process IDs to be killed: [529570] (in reverse order)
[2025-06-05 03:44:26] 2025-06-05 01:42:48,445 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:44:26] 2025-06-05 01:42:48,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:44:26] 2025-06-05 01:42:48,456 | INFO     | did not find any defunct processes belonging to 529570
[2025-06-05 03:44:26] 2025-06-05 01:42:48,467 | INFO     | did not find any defunct processes belonging to 529570
[2025-06-05 03:44:26] 2025-06-05 01:42:48,468 | INFO     | ready for new job
[2025-06-05 03:44:26] 2025-06-05 01:42:48,468 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:44:26] 2025-06-05 01:42:48,470 | INFO     | **************************************
[2025-06-05 03:44:26] 2025-06-05 01:42:48,470 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:44:26] 2025-06-05 01:42:48,470 | INFO     | **************************************
[2025-06-05 03:44:26] 2025-06-05 01:42:48,470 | INFO     | 
[2025-06-05 03:44:26] 2025-06-05 01:42:48,474 | INFO     | architecture information:
[2025-06-05 03:44:26] 2025-06-05 01:42:48,475 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:44:26] 2025-06-05 01:42:48,489 | INFO     | cat /etc/os-release:
[2025-06-05 03:44:26] NAME="CentOS Linux"
[2025-06-05 03:44:26] VERSION="7 (Core)"
[2025-06-05 03:44:26] ID="centos"
[2025-06-05 03:44:26] ID_LIKE="rhel fedora"
[2025-06-05 03:44:26] VERSION_ID="7"
[2025-06-05 03:44:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:44:26] ANSI_COLOR="0;31"
[2025-06-05 03:44:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:44:26] HOME_URL="https://www.centos.org/"
[2025-06-05 03:44:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:44:26] 
[2025-06-05 03:44:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:44:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:44:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:44:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:44:26] 
[2025-06-05 03:44:26] 2025-06-05 01:42:48,490 | INFO     | **************************************
[2025-06-05 03:44:26] 2025-06-05 01:42:48,993 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-06-05 03:44:26] 2025-06-05 01:42:49,010 | INFO     | sufficient remaining disk space (666177110016 B)
[2025-06-05 03:44:26] 2025-06-05 01:42:49,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:44:26] 2025-06-05 01:42:49,010 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:44:26] 2025-06-05 01:42:49,010 | INFO     | update_server=False
[2025-06-05 03:44:26] 2025-06-05 01:42:49,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:44:26] 2025-06-05 01:42:49,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:44:26] 2025-06-05 01:42:49,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:44:26] 2025-06-05 01:42:49,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:44:26] 2025-06-05 01:42:49,012 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:44:26] 2025-06-05 01:42:49,013 | INFO     | aborting loop
[2025-06-05 03:44:26] 2025-06-05 01:42:49,013 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:44:26] 2025-06-05 01:42:49,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:44:26] 2025-06-05 01:42:49,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:44:26] 2025-06-05 01:42:49,087 | INFO     | all data control threads have been joined
[2025-06-05 03:44:26] 2025-06-05 01:42:49,800 | INFO     | all job control threads have been joined
[2025-06-05 03:44:26] 2025-06-05 01:42:50,016 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:50,018 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:50,052 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:50,088 | INFO     | all payload control threads have been joined
[2025-06-05 03:44:26] 2025-06-05 01:42:50,092 | INFO     | [data] control thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:50,586 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:50,806 | INFO     | [job] control thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:50,887 | INFO     | [job] validate thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:50,920 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:50,944 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:51,016 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:51,062 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:51,093 | INFO     | [payload] control thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:51,179 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:51,292 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:51,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:44:26] 2025-06-05 01:42:52,962 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:53,018 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:44:26] 2025-06-05 01:42:54,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22551597991744)>', '<ExcThread(monitor, started 22551356991232)>']
[2025-06-05 03:44:26] 2025-06-05 01:42:55,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:44:26] 2025-06-05 01:42:55,042 | INFO     | [monitor] control thread has ended
[2025-06-05 03:44:26] 2025-06-05 01:42:59,944 | INFO     | all workflow threads have been joined
[2025-06-05 03:44:26] 2025-06-05 01:42:59,944 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:44:26] 2025-06-05 01:42:59,944 | INFO     | traces error code: 0
[2025-06-05 03:44:26] 2025-06-05 01:42:59,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:44:26] 2025-06-05 01:43:00,093 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:44:26] 2025-06-05 01:43:00,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:44:26] 2025-06-05 01:43:00,098 [wrapper] pilotpid: 522578
[2025-06-05 03:44:26] 2025-06-05 01:43:00,101 [wrapper] Pilot exit status: 0
[2025-06-05 03:44:26] 2025-06-05 01:43:00,110 [wrapper] pandaids: 6677455872
[2025-06-05 03:44:26] 2025-06-05 01:43:00,183 [wrapper] cleanup supervisor_pilot  773460 522579
[2025-06-05 03:44:26] 2025-06-05 01:43:00,186 [wrapper] Test setup, not cleaning
[2025-06-05 03:44:26] 2025-06-05 01:43:00,188 [wrapper] apfmon messages muted
[2025-06-05 03:44:26] 2025-06-05 01:43:00,191 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:44:26] 2025-06-05 01:43:00,194 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:44:26]  *** Error codes and diagnostics ***
[2025-06-05 03:44:26]     "exeErrorCode": 0,
[2025-06-05 03:44:26]     "exeErrorDiag": "",
[2025-06-05 03:44:26]     "pilotErrorCode": 0,
[2025-06-05 03:44:26]     "pilotErrorDiag": "",
[2025-06-05 03:44:26]  *** Listing of results directory ***
[2025-06-05 03:44:26] total 395128
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc    495897 Jun  3 05:41 pilot3.tar.gz
[2025-06-05 03:44:26] -rwx------ 1 boinc boinc     37140 Jun  3 05:59 runpilot2-wrapper.sh
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc      5111 Jun  3 05:59 queuedata.json
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:44:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:03 run_atlas
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:03 job.xml
[2025-06-05 03:44:26] -rw-r--r-- 2 boinc boinc 216151520 Jun  5 01:03 EVNT.45006593._000751.pool.root.1
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc      6636 Jun  5 01:03 init_data.xml
[2025-06-05 03:44:26] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:03 shared
[2025-06-05 03:44:26] -rw-r--r-- 2 boinc boinc    508875 Jun  5 01:03 input.tar.gz
[2025-06-05 03:44:26] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:03 start_atlas.sh
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:03 boinc_lockfile
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc      2524 Jun  5 01:03 pandaJob.out
[2025-06-05 03:44:26] -rw------- 1 boinc boinc    987032 Jun  5 01:03 agis_schedconf.cvmfs.json
[2025-06-05 03:44:26] -rw------- 1 boinc boinc   1598969 Jun  5 01:03 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:44:26] drwx------ 4 boinc boinc      4096 Jun  5 01:03 pilot3
[2025-06-05 03:44:26] -rw------- 1 boinc boinc 182225820 Jun  5 03:42 HITS.45006595._018766.pool.root.1
[2025-06-05 03:44:26] -rw------- 1 boinc boinc        95 Jun  5 03:42 pilot_heartbeat.json
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc       528 Jun  5 03:42 boinc_task_state.xml
[2025-06-05 03:44:26] -rw------- 1 boinc boinc      1034 Jun  5 03:42 memory_monitor_summary.json
[2025-06-05 03:44:26] -rw------- 1 boinc boinc    295028 Jun  5 03:42 log.45006595._018766.job.log.tgz.1
[2025-06-05 03:44:26] -rw------- 1 boinc boinc      7719 Jun  5 03:42 heartbeat.json
[2025-06-05 03:44:26] -rw------- 1 boinc boinc      4486 Jun  5 03:42 pilotlog.txt
[2025-06-05 03:44:26] -rw------- 1 boinc boinc    905645 Jun  5 03:43 log.45006595._018766.job.log.1
[2025-06-05 03:44:26] -rw------- 1 boinc boinc       357 Jun  5 03:43 output.list
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc       620 Jun  5 03:43 runtime_log
[2025-06-05 03:44:26] -rw------- 1 boinc boinc   1218560 Jun  5 03:43 result.tar.gz
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc      9025 Jun  5 03:43 runtime_log.err
[2025-06-05 03:44:26] -rw------- 1 boinc boinc       662 Jun  5 03:43 hWqKDm0yXg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnIXKDmacI92n.diag
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc        26 Jun  5 03:44 wrapper_checkpoint.txt
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc      8192 Jun  5 03:44 boinc_mmap_file
[2025-06-05 03:44:26] -rw-r--r-- 1 boinc boinc     20990 Jun  5 03:44 stderr.txt
[2025-06-05 03:44:26] HITS file was successfully produced:
[2025-06-05 03:44:26] -rw------- 1 boinc boinc 182225820 Jun  5 03:42 shared/HITS.pool.root.1
[2025-06-05 03:44:26]  *** Contents of shared directory: ***
[2025-06-05 03:44:26] total 390756
[2025-06-05 03:44:26] -rw-r--r-- 2 boinc boinc 216151520 Jun  5 01:03 ATLAS.root_0
[2025-06-05 03:44:26] -rw-r--r-- 2 boinc boinc    508875 Jun  5 01:03 input.tar.gz
[2025-06-05 03:44:26] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:03 start_atlas.sh
[2025-06-05 03:44:26] -rw------- 1 boinc boinc 182225820 Jun  5 03:42 HITS.pool.root.1
[2025-06-05 03:44:26] -rw------- 1 boinc boinc   1218560 Jun  5 03:43 result.tar.gz
03:44:27 (518815): run_atlas exited; CPU time 36627.574613
03:44:27 (518815): called boinc_finish(0)

</stderr_txt>
]]>

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