Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:00:03 (23133): wrapper (7.7.26015): starting
03:00:03 (23133): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:00:03] Arguments: --nthreads 8
[2025-06-03 03:00:03] Threads: 8
[2025-06-03 03:00:03] Checking for CVMFS
[2025-06-03 03:00:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:00:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:00:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:00:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:00:03] 2.11.2.0 2810 33914 75012 146733 0 58 14032105 20275201 1 130560 0 11286213 99.980 6132093 7509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 03:00:03] CVMFS is ok
[2025-06-03 03:00:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:00:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:00:03] Further information can be found at the LHC@home message board.
[2025-06-03 03:00:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:00:03] Checking for apptainer binary...
[2025-06-03 03:00:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:00:03] Running /usr/bin/apptainer --version
[2025-06-03 03:00:03] apptainer version 1.3.2-1.el7
[2025-06-03 03:00:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:00:05] c-204-37.aglt2.org
[2025-06-03 03:00:05] apptainer works
[2025-06-03 03:00:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:00:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:00:05] Starting ATLAS job with PandaID=6677456506
[2025-06-03 03:00:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 04:50:48]  *** The last 200 lines of the pilot log: ***
[2025-06-03 04:50:48] 2025-06-03 08:50:25,248 | INFO     | monitor loop #489: job 0:6677456506 is in state 'finished'
[2025-06-03 04:50:48] 2025-06-03 08:50:25,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:50:48] 2025-06-03 08:50:27,751 | INFO     | monitor loop #490: job 0:6677456506 is in state 'finished'
[2025-06-03 04:50:48] 2025-06-03 08:50:27,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:50:48] 2025-06-03 08:50:28,224 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 04:50:48] 2025-06-03 08:50:28,224 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677456506/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 04:50:48] 2025-06-03 08:50:28,225 | INFO     | extracted standard info from prmon json
[2025-06-03 04:50:48] 2025-06-03 08:50:28,225 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 04:50:48] 2025-06-03 08:50:28,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 04:50:48] 2025-06-03 08:50:28,226 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 04:50:48] 2025-06-03 08:50:28,226 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 04:50:48] 2025-06-03 08:50:28,230 | INFO     | fitting pss+swap vs Time
[2025-06-03 04:50:48] 2025-06-03 08:50:28,230 | INFO     | sum of square deviations: 390582207.0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,231 | INFO     | sum of deviations: 8607479572.499998
[2025-06-03 04:50:48] 2025-06-03 08:50:28,231 | INFO     | mean x: 1748937318.5
[2025-06-03 04:50:48] 2025-06-03 08:50:28,231 | INFO     | mean y: 2477458.935185185
[2025-06-03 04:50:48] 2025-06-03 08:50:28,231 | INFO     | -- intersect: -38539836995.68018
[2025-06-03 04:50:48] 2025-06-03 08:50:28,231 | INFO     | intersect: -38539836995.68018
[2025-06-03 04:50:48] 2025-06-03 08:50:28,232 | INFO     | chi2: 1.5324631485863658
[2025-06-03 04:50:48] 2025-06-03 08:50:28,232 | INFO     | sum of square deviations: 338804492.0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,233 | INFO     | sum of deviations: 8151105662.999999
[2025-06-03 04:50:48] 2025-06-03 08:50:28,233 | INFO     | mean x: 1748937166.0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,233 | INFO     | mean y: 2476115.2524271845
[2025-06-03 04:50:48] 2025-06-03 08:50:28,234 | INFO     | -- intersect: -42074214054.52776
[2025-06-03 04:50:48] 2025-06-03 08:50:28,234 | INFO     | intersect: -42074214054.52776
[2025-06-03 04:50:48] 2025-06-03 08:50:28,234 | INFO     | chi2: 1.5357028872737046
[2025-06-03 04:50:48] 2025-06-03 08:50:28,234 | INFO     | current chi2=1.5357028872737046 (change=-0.21140728182125423 %)
[2025-06-03 04:50:48] 2025-06-03 08:50:28,234 | INFO     | right removable region: 102
[2025-06-03 04:50:48] 2025-06-03 08:50:28,235 | INFO     | sum of square deviations: 338804492.0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,235 | INFO     | sum of deviations: -7014237988.0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,235 | INFO     | mean x: 1748937471.0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,236 | INFO     | mean y: 2522441.5631067962
[2025-06-03 04:50:48] 2025-06-03 08:50:28,236 | INFO     | -- intersect: 36210612763.23703
[2025-06-03 04:50:48] 2025-06-03 08:50:28,236 | INFO     | intersect: 36210612763.23703
[2025-06-03 04:50:48] 2025-06-03 08:50:28,236 | INFO     | chi2: 0.07685931746824708
[2025-06-03 04:50:48] 2025-06-03 08:50:28,236 | INFO     | current chi2=0.07685931746824708 (change=94.98458951269748 %)
[2025-06-03 04:50:48] 2025-06-03 08:50:28,237 | INFO     | sum of square deviations: 291817564.5
[2025-06-03 04:50:48] 2025-06-03 08:50:28,237 | INFO     | sum of deviations: -3826202033.4999995
[2025-06-03 04:50:48] 2025-06-03 08:50:28,237 | INFO     | mean x: 1748937623.5
[2025-06-03 04:50:48] 2025-06-03 08:50:28,237 | INFO     | mean y: 2512059.4183673467
[2025-06-03 04:50:48] 2025-06-03 08:50:28,238 | INFO     | -- intersect: 22933923686.288948
[2025-06-03 04:50:48] 2025-06-03 08:50:28,238 | INFO     | intersect: 22933923686.288948
[2025-06-03 04:50:48] 2025-06-03 08:50:28,238 | INFO     | chi2: 0.05899658914507233
[2025-06-03 04:50:48] 2025-06-03 08:50:28,238 | INFO     | current chi2=0.05899658914507233 (change=23.24081049842055 %)
[2025-06-03 04:50:48] 2025-06-03 08:50:28,238 | INFO     | left removable region: 20
[2025-06-03 04:50:48] 2025-06-03 08:50:28,238 | INFO     | sum of square deviations: 170944600.5
[2025-06-03 04:50:48] 2025-06-03 08:50:28,239 | INFO     | sum of deviations: 476237522.5
[2025-06-03 04:50:48] 2025-06-03 08:50:28,239 | INFO     | mean x: 1748937745.5
[2025-06-03 04:50:48] 2025-06-03 08:50:28,239 | INFO     | mean y: 2495304.7195121953
[2025-06-03 04:50:48] 2025-06-03 08:50:28,239 | INFO     | -- intersect: -4869900643.953084
[2025-06-03 04:50:48] 2025-06-03 08:50:28,240 | INFO     | intersect: -4869900643.953084
[2025-06-03 04:50:48] 2025-06-03 08:50:28,240 | INFO     | chi2: 0.0001835051473507046
[2025-06-03 04:50:48] 2025-06-03 08:50:28,240 | INFO     | -- intersect: -4869900643.953084
[2025-06-03 04:50:48] 2025-06-03 08:50:28,240 | INFO     | current memory leak: 2.79 B/s (using 82 data points, chi2=0.00)
[2025-06-03 04:50:48] 2025-06-03 08:50:28,241 | INFO     | ..............................
[2025-06-03 04:50:48] 2025-06-03 08:50:28,241 | INFO     | . Timing measurements:
[2025-06-03 04:50:48] 2025-06-03 08:50:28,241 | INFO     | . get job = 0 s
[2025-06-03 04:50:48] 2025-06-03 08:50:28,241 | INFO     | . initial setup = 2 s
[2025-06-03 04:50:48] 2025-06-03 08:50:28,241 | INFO     | . payload setup = 11 s
[2025-06-03 04:50:48] 2025-06-03 08:50:28,241 | INFO     | . stage-in = 0 s
[2025-06-03 04:50:48] 2025-06-03 08:50:28,241 | INFO     | . payload execution = 6563 s
[2025-06-03 04:50:48] 2025-06-03 08:50:28,242 | INFO     | . stage-out = 0 s
[2025-06-03 04:50:48] 2025-06-03 08:50:28,242 | INFO     | . log creation = 0 s
[2025-06-03 04:50:48] 2025-06-03 08:50:28,242 | INFO     | ..............................
[2025-06-03 04:50:48] 2025-06-03 08:50:28,342 | INFO     | 
[2025-06-03 04:50:48] 2025-06-03 08:50:28,343 | INFO     | job summary report
[2025-06-03 04:50:48] 2025-06-03 08:50:28,343 | INFO     | --------------------------------------------------
[2025-06-03 04:50:48] 2025-06-03 08:50:28,343 | INFO     | PanDA job id: 6677456506
[2025-06-03 04:50:48] 2025-06-03 08:50:28,343 | INFO     | task id: 45006595
[2025-06-03 04:50:48] 2025-06-03 08:50:28,343 | INFO     | errors: (none)
[2025-06-03 04:50:48] 2025-06-03 08:50:28,343 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 04:50:48] 2025-06-03 08:50:28,344 | INFO     | pilot state: finished 
[2025-06-03 04:50:48] 2025-06-03 08:50:28,344 | INFO     | transexitcode: 0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,344 | INFO     | exeerrorcode: 0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,344 | INFO     | exeerrordiag: 
[2025-06-03 04:50:48] 2025-06-03 08:50:28,344 | INFO     | exitcode: 0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,344 | INFO     | exitmsg: OK
[2025-06-03 04:50:48] 2025-06-03 08:50:28,345 | INFO     | cpuconsumptiontime: 49295 s
[2025-06-03 04:50:48] 2025-06-03 08:50:28,345 | INFO     | nevents: 400
[2025-06-03 04:50:48] 2025-06-03 08:50:28,345 | INFO     | neventsw: 0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,345 | INFO     | pid: 1587
[2025-06-03 04:50:48] 2025-06-03 08:50:28,345 | INFO     | pgrp: 1587
[2025-06-03 04:50:48] 2025-06-03 08:50:28,346 | INFO     | corecount: 8
[2025-06-03 04:50:48] 2025-06-03 08:50:28,346 | INFO     | event service: False
[2025-06-03 04:50:48] 2025-06-03 08:50:28,346 | INFO     | sizes: {0: 2405011, 1: 2405210, 7: 2405416, 11: 2405444, 6578: 2432376, 6579: 2432375, 6581: 2441500, 6584: 2441556, 6590: 2441726}
[2025-06-03 04:50:48] 2025-06-03 08:50:28,346 | INFO     | --------------------------------------------------
[2025-06-03 04:50:48] 2025-06-03 08:50:28,346 | INFO     | 
[2025-06-03 04:50:48] 2025-06-03 08:50:28,346 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 04:50:48] 2025-06-03 08:50:28,375 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,376 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 04:50:48] 2025-06-03 08:50:28,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,378 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 04:50:48] 2025-06-03 08:50:28,379 | INFO     | job 6677456506 has completed (purged errors)
[2025-06-03 04:50:48] 2025-06-03 08:50:28,379 | INFO     | overall cleanup function is called
[2025-06-03 04:50:48] 2025-06-03 08:50:28,684 | INFO     | PID=26910 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 04:50:48] 2025-06-03 08:50:29,386 | INFO     | --- collectZombieJob: --- 10, [1587]
[2025-06-03 04:50:48] 2025-06-03 08:50:29,386 | INFO     | zombie collector waiting for pid 1587
[2025-06-03 04:50:48] 2025-06-03 08:50:29,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 04:50:48] 2025-06-03 08:50:29,387 | INFO     | collected zombie processes
[2025-06-03 04:50:48] 2025-06-03 08:50:29,387 | INFO     | will attempt to kill all subprocesses of pid=1587
[2025-06-03 04:50:48] 2025-06-03 08:50:29,481 | INFO     | process IDs to be killed: [1587] (in reverse order)
[2025-06-03 04:50:48] 2025-06-03 08:50:29,541 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 04:50:48] 2025-06-03 08:50:29,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 04:50:48] 2025-06-03 08:50:29,546 | INFO     | did not find any defunct processes belonging to 1587
[2025-06-03 04:50:48] 2025-06-03 08:50:29,549 | INFO     | did not find any defunct processes belonging to 1587
[2025-06-03 04:50:48] 2025-06-03 08:50:29,550 | INFO     | ready for new job
[2025-06-03 04:50:48] 2025-06-03 08:50:29,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 04:50:48] 2025-06-03 08:50:29,551 | INFO     | **************************************
[2025-06-03 04:50:48] 2025-06-03 08:50:29,552 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 04:50:48] 2025-06-03 08:50:29,552 | INFO     | **************************************
[2025-06-03 04:50:48] 2025-06-03 08:50:29,552 | INFO     | 
[2025-06-03 04:50:48] 2025-06-03 08:50:29,553 | INFO     | architecture information:
[2025-06-03 04:50:48] 2025-06-03 08:50:29,553 | INFO     | executing command: cat /etc/os-release
[2025-06-03 04:50:48] 2025-06-03 08:50:29,573 | INFO     | cat /etc/os-release:
[2025-06-03 04:50:48] NAME="CentOS Linux"
[2025-06-03 04:50:48] VERSION="7 (Core)"
[2025-06-03 04:50:48] ID="centos"
[2025-06-03 04:50:48] ID_LIKE="rhel fedora"
[2025-06-03 04:50:48] VERSION_ID="7"
[2025-06-03 04:50:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 04:50:48] ANSI_COLOR="0;31"
[2025-06-03 04:50:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 04:50:48] HOME_URL="https://www.centos.org/"
[2025-06-03 04:50:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 04:50:48] 
[2025-06-03 04:50:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 04:50:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 04:50:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 04:50:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 04:50:48] 
[2025-06-03 04:50:48] 2025-06-03 08:50:29,574 | INFO     | **************************************
[2025-06-03 04:50:48] 2025-06-03 08:50:30,076 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 04:50:48] 2025-06-03 08:50:30,096 | INFO     | sufficient remaining disk space (18602786816 B)
[2025-06-03 04:50:48] 2025-06-03 08:50:30,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 04:50:48] 2025-06-03 08:50:30,097 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 04:50:48] 2025-06-03 08:50:30,097 | INFO     | update_server=False
[2025-06-03 04:50:48] 2025-06-03 08:50:30,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 04:50:48] 2025-06-03 08:50:30,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 04:50:48] 2025-06-03 08:50:30,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:50:48] 2025-06-03 08:50:30,254 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 04:50:48] 2025-06-03 08:50:30,255 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 04:50:48] 2025-06-03 08:50:30,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:50:48] 2025-06-03 08:50:30,255 | INFO     | will abort loop
[2025-06-03 04:50:48] 2025-06-03 08:50:30,609 | INFO     | all data control threads have been joined
[2025-06-03 04:50:48] 2025-06-03 08:50:30,613 | INFO     | all job control threads have been joined
[2025-06-03 04:50:48] 2025-06-03 08:50:30,690 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 04:50:48] 2025-06-03 08:50:30,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 04:50:48] 2025-06-03 08:50:30,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 04:50:48] 2025-06-03 08:50:31,102 | INFO     | [job] retrieve thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:31,104 | INFO     | [job] queue monitor thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:31,260 | INFO     | [job] job monitor thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:31,304 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:31,496 | INFO     | all payload control threads have been joined
[2025-06-03 04:50:48] 2025-06-03 08:50:31,615 | INFO     | [data] control thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:31,618 | INFO     | [job] control thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:31,908 | INFO     | [payload] failed_post thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:32,101 | INFO     | [data] copytool_out thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:32,184 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:32,224 | INFO     | [payload] validate_post thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:32,260 | INFO     | [data] copytool_in thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:32,265 | INFO     | [job] validate thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:32,283 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:32,501 | INFO     | [payload] control thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:32,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 04:50:48] 2025-06-03 08:50:36,748 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:41,087 | INFO     | job.realtimelogging is not enabled
[2025-06-03 04:50:48] 2025-06-03 08:50:42,093 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 04:50:48] 2025-06-03 08:50:43,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798925756224)>', '<ExcThread(monitor, started 139798333339392)>']
[2025-06-03 04:50:48] 2025-06-03 08:50:43,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 04:50:48] 2025-06-03 08:50:43,751 | INFO     | [monitor] control thread has ended
[2025-06-03 04:50:48] 2025-06-03 08:50:48,395 | INFO     | all workflow threads have been joined
[2025-06-03 04:50:48] 2025-06-03 08:50:48,395 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 04:50:48] 2025-06-03 08:50:48,396 | INFO     | traces error code: 0
[2025-06-03 04:50:48] 2025-06-03 08:50:48,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 04:50:48] 2025-06-03 08:50:48,502 [wrapper] ==== pilot stdout END ====
[2025-06-03 04:50:48] 2025-06-03 08:50:48,507 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 04:50:48] 2025-06-03 08:50:48,511 [wrapper] pilotpid: 26910
[2025-06-03 04:50:48] 2025-06-03 08:50:48,516 [wrapper] Pilot exit status: 0
[2025-06-03 04:50:48] 2025-06-03 08:50:48,534 [wrapper] pandaids: 6677456506
[2025-06-03 04:50:48] 2025-06-03 08:50:48,577 [wrapper] cleanup supervisor_pilot  6840 26911
[2025-06-03 04:50:48] 2025-06-03 08:50:48,582 [wrapper] Test setup, not cleaning
[2025-06-03 04:50:48] 2025-06-03 08:50:48,587 [wrapper] apfmon messages muted
[2025-06-03 04:50:48] 2025-06-03 08:50:48,592 [wrapper] ==== wrapper stdout END ====
[2025-06-03 04:50:48] 2025-06-03 08:50:48,597 [wrapper] ==== wrapper stderr END ====
[2025-06-03 04:50:48]  *** Error codes and diagnostics ***
[2025-06-03 04:50:48]     "exeErrorCode": 0,
[2025-06-03 04:50:48]     "exeErrorDiag": "",
[2025-06-03 04:50:48]     "pilotErrorCode": 0,
[2025-06-03 04:50:48]     "pilotErrorDiag": "",
[2025-06-03 04:50:48]  *** Listing of results directory ***
[2025-06-03 04:50:48] total 394192
[2025-06-03 04:50:48] -rwx------ 1 boincer umatlas     37140 Jun  3 00:08 runpilot2-wrapper.sh
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 00:08 pilot3.tar.gz
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 00:08 queuedata.json
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas       100 Jun  3 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 04:50:48] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 03:00 run_atlas
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas       105 Jun  3 03:00 job.xml
[2025-06-03 04:50:48] -rw-r--r-- 2 boincer umatlas 215808174 Jun  3 03:00 EVNT.45006593._000760.pool.root.1
[2025-06-03 04:50:48] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 03:00 start_atlas.sh
[2025-06-03 04:50:48] drwxrwx--x 2 boincer umatlas      4096 Jun  3 03:00 shared
[2025-06-03 04:50:48] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 03:00 input.tar.gz
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas         0 Jun  3 03:00 boinc_lockfile
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 03:00 pandaJob.out
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas    986901 Jun  3 03:00 agis_schedconf.cvmfs.json
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas   1603667 Jun  3 03:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 04:50:48] drwx------ 4 boincer umatlas      4096 Jun  3 03:00 pilot3
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas      5905 Jun  3 04:46 init_data.xml
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas 182149105 Jun  3 04:49 HITS.45006595._018991.pool.root.1
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas        95 Jun  3 04:49 pilot_heartbeat.json
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas       529 Jun  3 04:50 boinc_task_state.xml
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas      1049 Jun  3 04:50 memory_monitor_summary.json
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas    322964 Jun  3 04:50 log.45006595._018991.job.log.tgz.1
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas      7740 Jun  3 04:50 heartbeat.json
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 04:50 boinc_mmap_file
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas        27 Jun  3 04:50 wrapper_checkpoint.txt
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas      4611 Jun  3 04:50 pilotlog.txt
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas    607434 Jun  3 04:50 log.45006595._018991.job.log.1
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas       357 Jun  3 04:50 output.list
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas       620 Jun  3 04:50 runtime_log
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas    952320 Jun  3 04:50 result.tar.gz
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas       658 Jun  3 04:50 xW6NDm77Xg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOKXKDmjVht5n.diag
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 04:50 runtime_log.err
[2025-06-03 04:50:48] -rw-r--r-- 1 boincer umatlas     21105 Jun  3 04:50 stderr.txt
[2025-06-03 04:50:48] HITS file was successfully produced:
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas 182149105 Jun  3 04:49 shared/HITS.pool.root.1
[2025-06-03 04:50:48]  *** Contents of shared directory: ***
[2025-06-03 04:50:48] total 390084
[2025-06-03 04:50:48] -rw-r--r-- 2 boincer umatlas 215808174 Jun  3 03:00 ATLAS.root_0
[2025-06-03 04:50:48] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 03:00 start_atlas.sh
[2025-06-03 04:50:48] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 03:00 input.tar.gz
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas 182149105 Jun  3 04:49 HITS.pool.root.1
[2025-06-03 04:50:48] -rw------- 1 boincer umatlas    952320 Jun  3 04:50 result.tar.gz
04:50:50 (23133): run_atlas exited; CPU time 49261.009924
04:50:50 (23133): called boinc_finish(0)

</stderr_txt>
]]>

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