Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:04:21 (29221): wrapper (7.7.26015): starting
17:04:21 (29221): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:04:21] Arguments: --nthreads 8
[2025-06-03 17:04:21] Threads: 8
[2025-06-03 17:04:21] Checking for CVMFS
[2025-06-03 17:04:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:04:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:04:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:05:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:05:44] 2.11.2.0 2200 31921 93184 146743 3 264 13756184 25165824 3876 130560 0 16706686 99.749 20331204 2141 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:05:44] CVMFS is ok
[2025-06-03 17:05:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:05:44] Checking for apptainer binary...
[2025-06-03 17:05:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:05:44] Running /usr/bin/apptainer --version
[2025-06-03 17:05:44] apptainer version 1.3.2-1.el7
[2025-06-03 17:05:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:05:52] cg-vwn296.simple-grid.lan
[2025-06-03 17:05:52] apptainer works
[2025-06-03 17:05:52] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:05:52] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:05:52] Starting ATLAS job with PandaID=6677456613
[2025-06-03 17:05:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:48:39]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:48:39] 2025-06-03 18:48:00,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:48:39] 2025-06-03 18:48:00,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:48:39] 2025-06-03 18:48:00,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:48:39] 2025-06-03 18:48:00,686 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:48:39] 2025-06-03 18:48:00,686 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,688 | INFO     | sum of deviations: 32505996894.999992
[2025-06-03 20:48:39] 2025-06-03 18:48:00,688 | INFO     | mean x: 1748969968.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,688 | INFO     | mean y: 2441267.7799043064
[2025-06-03 20:48:39] 2025-06-03 18:48:00,688 | INFO     | -- intersect: -20081017172.977432
[2025-06-03 20:48:39] 2025-06-03 18:48:00,688 | INFO     | intersect: -20081017172.977432
[2025-06-03 20:48:39] 2025-06-03 18:48:00,689 | INFO     | chi2: 2.668404584041848
[2025-06-03 20:48:39] 2025-06-03 18:48:00,689 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,691 | INFO     | sum of deviations: 45464252423.5
[2025-06-03 20:48:39] 2025-06-03 18:48:00,691 | INFO     | mean x: 1748969815.5
[2025-06-03 20:48:39] 2025-06-03 18:48:00,691 | INFO     | mean y: 2451021.475490196
[2025-06-03 20:48:39] 2025-06-03 18:48:00,691 | INFO     | -- intersect: -30203594894.72457
[2025-06-03 20:48:39] 2025-06-03 18:48:00,691 | INFO     | intersect: -30203594894.72457
[2025-06-03 20:48:39] 2025-06-03 18:48:00,692 | INFO     | chi2: 1.865025630356193
[2025-06-03 20:48:39] 2025-06-03 18:48:00,692 | INFO     | current chi2=1.865025630356193 (change=30.107089400542563 %)
[2025-06-03 20:48:39] 2025-06-03 18:48:00,692 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,694 | INFO     | sum of deviations: 44176686536.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,694 | INFO     | mean x: 1748969663.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,694 | INFO     | mean y: 2449981.5879396987
[2025-06-03 20:48:39] 2025-06-03 18:48:00,694 | INFO     | -- intersect: -31616593565.17299
[2025-06-03 20:48:39] 2025-06-03 18:48:00,694 | INFO     | intersect: -31616593565.17299
[2025-06-03 20:48:39] 2025-06-03 18:48:00,695 | INFO     | chi2: 1.8658676815790847
[2025-06-03 20:48:39] 2025-06-03 18:48:00,695 | INFO     | current chi2=1.8658676815790847 (change=-0.04514957913639481 %)
[2025-06-03 20:48:39] 2025-06-03 18:48:00,695 | INFO     | right removable region: 198
[2025-06-03 20:48:39] 2025-06-03 18:48:00,695 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,697 | INFO     | sum of deviations: -6645192044.499998
[2025-06-03 20:48:39] 2025-06-03 18:48:00,697 | INFO     | mean x: 1748970120.5
[2025-06-03 20:48:39] 2025-06-03 18:48:00,697 | INFO     | mean y: 2471109.3088235296
[2025-06-03 20:48:39] 2025-06-03 18:48:00,697 | INFO     | -- intersect: 4417478512.322528
[2025-06-03 20:48:39] 2025-06-03 18:48:00,697 | INFO     | intersect: 4417478512.322528
[2025-06-03 20:48:39] 2025-06-03 18:48:00,698 | INFO     | chi2: 0.8374199534169696
[2025-06-03 20:48:39] 2025-06-03 18:48:00,698 | INFO     | current chi2=0.8374199534169696 (change=68.61720451144913 %)
[2025-06-03 20:48:39] 2025-06-03 18:48:00,698 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,700 | INFO     | sum of deviations: -7534969246.000001
[2025-06-03 20:48:39] 2025-06-03 18:48:00,700 | INFO     | mean x: 1748970273.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,700 | INFO     | mean y: 2471838.3467336684
[2025-06-03 20:48:39] 2025-06-03 18:48:00,700 | INFO     | -- intersect: 5395556347.167427
[2025-06-03 20:48:39] 2025-06-03 18:48:00,700 | INFO     | intersect: 5395556347.167427
[2025-06-03 20:48:39] 2025-06-03 18:48:00,700 | INFO     | chi2: 0.8316450157579554
[2025-06-03 20:48:39] 2025-06-03 18:48:00,701 | INFO     | current chi2=0.8316450157579554 (change=0.6896107067249209 %)
[2025-06-03 20:48:39] 2025-06-03 18:48:00,701 | INFO     | left removable region: 20
[2025-06-03 20:48:39] 2025-06-03 18:48:00,701 | INFO     | sum of square deviations: 1748737904.5
[2025-06-03 20:48:39] 2025-06-03 18:48:00,702 | INFO     | sum of deviations: 3062650546.0
[2025-06-03 20:48:39] 2025-06-03 18:48:00,703 | INFO     | mean x: 1748970242.5
[2025-06-03 20:48:39] 2025-06-03 18:48:00,703 | INFO     | mean y: 2484859.1235955055
[2025-06-03 20:48:39] 2025-06-03 18:48:00,703 | INFO     | -- intersect: -3060572591.82238
[2025-06-03 20:48:39] 2025-06-03 18:48:00,703 | INFO     | intersect: -3060572591.82238
[2025-06-03 20:48:39] 2025-06-03 18:48:00,703 | INFO     | chi2: 0.001150894405657732
[2025-06-03 20:48:39] 2025-06-03 18:48:00,703 | INFO     | -- intersect: -3060572591.82238
[2025-06-03 20:48:39] 2025-06-03 18:48:00,704 | INFO     | current memory leak: 1.75 B/s (using 178 data points, chi2=0.00)
[2025-06-03 20:48:39] 2025-06-03 18:48:00,704 | INFO     | ..............................
[2025-06-03 20:48:39] 2025-06-03 18:48:00,704 | INFO     | . Timing measurements:
[2025-06-03 20:48:39] 2025-06-03 18:48:00,705 | INFO     | . get job = 0 s
[2025-06-03 20:48:39] 2025-06-03 18:48:00,705 | INFO     | . initial setup = 6 s
[2025-06-03 20:48:39] 2025-06-03 18:48:00,705 | INFO     | . payload setup = 52 s
[2025-06-03 20:48:39] 2025-06-03 18:48:00,705 | INFO     | . stage-in = 0 s
[2025-06-03 20:48:39] 2025-06-03 18:48:00,705 | INFO     | . payload execution = 12799 s
[2025-06-03 20:48:39] 2025-06-03 18:48:00,705 | INFO     | . stage-out = 11 s
[2025-06-03 20:48:39] 2025-06-03 18:48:00,705 | INFO     | . log creation = 1 s
[2025-06-03 20:48:39] 2025-06-03 18:48:00,705 | INFO     | ..............................
[2025-06-03 20:48:39] 2025-06-03 18:48:01,039 | INFO     | 
[2025-06-03 20:48:39] 2025-06-03 18:48:01,040 | INFO     | job summary report
[2025-06-03 20:48:39] 2025-06-03 18:48:01,040 | INFO     | --------------------------------------------------
[2025-06-03 20:48:39] 2025-06-03 18:48:01,040 | INFO     | PanDA job id: 6677456613
[2025-06-03 20:48:39] 2025-06-03 18:48:01,040 | INFO     | task id: 45006595
[2025-06-03 20:48:39] 2025-06-03 18:48:01,040 | INFO     | errors: (none)
[2025-06-03 20:48:39] 2025-06-03 18:48:01,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | pilot state: finished 
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | transexitcode: 0
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | exeerrorcode: 0
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | exeerrordiag: 
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | exitcode: 0
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | exitmsg: OK
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | cpuconsumptiontime: 48273 s
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | nevents: 400
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | neventsw: 0
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | pid: 7191
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | pgrp: 7191
[2025-06-03 20:48:39] 2025-06-03 18:48:01,041 | INFO     | corecount: 8
[2025-06-03 20:48:39] 2025-06-03 18:48:01,042 | INFO     | event service: False
[2025-06-03 20:48:39] 2025-06-03 18:48:01,042 | INFO     | sizes: {0: 2405183, 1: 2405211, 12: 2405211, 23: 2405239, 33: 2405267, 44: 2405323, 55: 2405479, 65: 2405507, 76: 2405535, 86: 2405797, 87: 2405825, 12855: 2435324
[2025-06-03 20:48:39] 2025-06-03 18:48:01,042 | INFO     | --------------------------------------------------
[2025-06-03 20:48:39] 2025-06-03 18:48:01,042 | INFO     | 
[2025-06-03 20:48:39] 2025-06-03 18:48:01,042 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-06-03 20:48:39] 2025-06-03 18:48:01,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:48:39] 2025-06-03 18:48:01,545 | INFO     | job 6677456613 has completed (purged errors)
[2025-06-03 20:48:39] 2025-06-03 18:48:01,545 | INFO     | overall cleanup function is called
[2025-06-03 20:48:39] 2025-06-03 18:48:02,328 | INFO     | PID=460 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-06-03 20:48:39] 2025-06-03 18:48:02,328 | INFO     | .. there are 9 such processes running
[2025-06-03 20:48:39] 2025-06-03 18:48:02,553 | INFO     | --- collectZombieJob: --- 10, [7191]
[2025-06-03 20:48:39] 2025-06-03 18:48:02,554 | INFO     | zombie collector waiting for pid 7191
[2025-06-03 20:48:39] 2025-06-03 18:48:02,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:48:39] 2025-06-03 18:48:02,554 | INFO     | collected zombie processes
[2025-06-03 20:48:39] 2025-06-03 18:48:02,554 | INFO     | will attempt to kill all subprocesses of pid=7191
[2025-06-03 20:48:39] 2025-06-03 18:48:02,723 | INFO     | process IDs to be killed: [7191] (in reverse order)
[2025-06-03 20:48:39] 2025-06-03 18:48:03,644 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:48:39] 2025-06-03 18:48:03,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:48:39] 2025-06-03 18:48:03,648 | INFO     | did not find any defunct processes belonging to 7191
[2025-06-03 20:48:39] 2025-06-03 18:48:03,654 | INFO     | did not find any defunct processes belonging to 7191
[2025-06-03 20:48:39] 2025-06-03 18:48:03,654 | INFO     | ready for new job
[2025-06-03 20:48:39] 2025-06-03 18:48:03,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:48:39] 2025-06-03 18:48:03,657 | INFO     | **************************************
[2025-06-03 20:48:39] 2025-06-03 18:48:03,657 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:48:39] 2025-06-03 18:48:03,657 | INFO     | **************************************
[2025-06-03 20:48:39] 2025-06-03 18:48:03,657 | INFO     | 
[2025-06-03 20:48:39] 2025-06-03 18:48:03,658 | INFO     | pilot is running in a VM
[2025-06-03 20:48:39] 2025-06-03 18:48:03,658 | INFO     | architecture information:
[2025-06-03 20:48:39] 2025-06-03 18:48:03,660 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:48:39] 2025-06-03 18:48:03,940 | INFO     | cat /etc/os-release:
[2025-06-03 20:48:39] NAME="CentOS Linux"
[2025-06-03 20:48:39] VERSION="7 (Core)"
[2025-06-03 20:48:39] ID="centos"
[2025-06-03 20:48:39] ID_LIKE="rhel fedora"
[2025-06-03 20:48:39] VERSION_ID="7"
[2025-06-03 20:48:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:48:39] ANSI_COLOR="0;31"
[2025-06-03 20:48:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:48:39] HOME_URL="https://www.centos.org/"
[2025-06-03 20:48:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:48:39] 
[2025-06-03 20:48:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:48:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:48:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:48:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:48:39] 
[2025-06-03 20:48:39] 2025-06-03 18:48:03,941 | INFO     | **************************************
[2025-06-03 20:48:39] 2025-06-03 18:48:04,445 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-06-03 20:48:39] 2025-06-03 18:48:04,653 | INFO     | sufficient remaining disk space (496969449472 B)
[2025-06-03 20:48:39] 2025-06-03 18:48:04,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:48:39] 2025-06-03 18:48:04,653 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:48:39] 2025-06-03 18:48:04,653 | INFO     | update_server=False
[2025-06-03 20:48:39] 2025-06-03 18:48:04,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:48:39] 2025-06-03 18:48:04,654 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 20:48:39] 2025-06-03 18:48:04,654 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:48:39] 2025-06-03 18:48:04,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:48:39] 2025-06-03 18:48:04,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:48:39] 2025-06-03 18:48:04,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:48:39] 2025-06-03 18:48:04,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:48:39] 2025-06-03 18:48:04,663 | INFO     | aborting loop
[2025-06-03 20:48:39] 2025-06-03 18:48:04,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:48:39] 2025-06-03 18:48:04,998 | INFO     | all payload control threads have been joined
[2025-06-03 20:48:39] 2025-06-03 18:48:05,043 | INFO     | all job control threads have been joined
[2025-06-03 20:48:39] 2025-06-03 18:48:05,330 | INFO     | all data control threads have been joined
[2025-06-03 20:48:39] 2025-06-03 18:48:05,660 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:05,669 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:05,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:48:39] 2025-06-03 18:48:05,905 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:05,940 | INFO     | [job] validate thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:06,003 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:06,005 | INFO     | [payload] control thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:06,049 | INFO     | [job] control thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:06,337 | INFO     | [data] control thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:06,367 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:06,394 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:06,404 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:06,868 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:06,980 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:07,030 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:07,126 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:08,669 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:48:39] 2025-06-03 18:48:10,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737919100736)>', '<ExcThread(monitor, started 139737473992448)>']
[2025-06-03 20:48:39] 2025-06-03 18:48:10,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:48:39] 2025-06-03 18:48:10,689 | INFO     | [monitor] control thread has ended
[2025-06-03 20:48:39] 2025-06-03 18:48:15,187 | INFO     | all workflow threads have been joined
[2025-06-03 20:48:39] 2025-06-03 18:48:15,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:48:39] 2025-06-03 18:48:15,188 | INFO     | traces error code: 0
[2025-06-03 20:48:39] 2025-06-03 18:48:15,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:48:39] 2025-06-03 18:48:15,495 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:48:39] 2025-06-03 18:48:15,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:48:39] 2025-06-03 18:48:15,667 [wrapper] pilotpid: 460
[2025-06-03 20:48:39] 2025-06-03 18:48:15,768 [wrapper] Pilot exit status: 0
[2025-06-03 20:48:39] 2025-06-03 18:48:16,148 [wrapper] pandaids: 6677456613
[2025-06-03 20:48:39] 2025-06-03 18:48:16,752 [wrapper] cleanup supervisor_pilot 32306 461
[2025-06-03 20:48:39] 2025-06-03 18:48:16,846 [wrapper] Test setup, not cleaning
[2025-06-03 20:48:39] 2025-06-03 18:48:16,955 [wrapper] apfmon messages muted
[2025-06-03 20:48:39] 2025-06-03 18:48:17,043 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:48:39] 2025-06-03 18:48:17,123 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:48:39]  *** Error codes and diagnostics ***
[2025-06-03 20:48:39]     "exeErrorCode": 0,
[2025-06-03 20:48:39]     "exeErrorDiag": "",
[2025-06-03 20:48:39]     "pilotErrorCode": 0,
[2025-06-03 20:48:39]     "pilotErrorDiag": "",
[2025-06-03 20:48:39]  *** Listing of results directory ***
[2025-06-03 20:48:39] total 383844
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc    495897 Jun  3 06:08 pilot3.tar.gz
[2025-06-03 20:48:39] -rwx------. 1 boinc boinc     37140 Jun  3 06:12 runpilot2-wrapper.sh
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc      5111 Jun  3 06:12 queuedata.json
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:48:39] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:04 run_atlas
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:04 job.xml
[2025-06-03 20:48:39] -rw-r--r--. 2 boinc boinc 214325726 Jun  3 17:04 EVNT.45006593._000764.pool.root.1
[2025-06-03 20:48:39] -rw-r--r--. 2 boinc boinc    508874 Jun  3 17:04 input.tar.gz
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc      6392 Jun  3 17:04 init_data.xml
[2025-06-03 20:48:39] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:04 start_atlas.sh
[2025-06-03 20:48:39] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:04 shared
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:04 boinc_lockfile
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:05 pandaJob.out
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc    982724 Jun  3 17:08 agis_schedconf.cvmfs.json
[2025-06-03 20:48:39] drwx------. 4 boinc boinc      4096 Jun  3 17:08 pilot3
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc 171856037 Jun  3 20:44 HITS.45006595._019098.pool.root.1
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:45 boinc_task_state.xml
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc      1017 Jun  3 20:46 memory_monitor_summary.json
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc   1603667 Jun  3 20:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc    385172 Jun  3 20:46 log.45006595._019098.job.log.tgz.1
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc        95 Jun  3 20:47 pilot_heartbeat.json
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc      7688 Jun  3 20:48 heartbeat.json
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc      4540 Jun  3 20:48 pilotlog.txt
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc   1138499 Jun  3 20:48 log.45006595._019098.job.log.1
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc       357 Jun  3 20:48 output.list
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:48 runtime_log
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc   1546240 Jun  3 20:48 result.tar.gz
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc      8673 Jun  3 20:48 runtime_log.err
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc       656 Jun  3 20:48 pzUNDmBCYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHuhKDmapuCtm.diag
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:48 boinc_mmap_file
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:48 wrapper_checkpoint.txt
[2025-06-03 20:48:39] -rw-r--r--. 1 boinc boinc     20613 Jun  3 20:48 stderr.txt
[2025-06-03 20:48:39] HITS file was successfully produced:
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc 171856037 Jun  3 20:44 shared/HITS.pool.root.1
[2025-06-03 20:48:39]  *** Contents of shared directory: ***
[2025-06-03 20:48:39] total 379164
[2025-06-03 20:48:39] -rw-r--r--. 2 boinc boinc 214325726 Jun  3 17:04 ATLAS.root_0
[2025-06-03 20:48:39] -rw-r--r--. 2 boinc boinc    508874 Jun  3 17:04 input.tar.gz
[2025-06-03 20:48:39] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:04 start_atlas.sh
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc 171856037 Jun  3 20:44 HITS.pool.root.1
[2025-06-03 20:48:39] -rw-------. 1 boinc boinc   1546240 Jun  3 20:48 result.tar.gz
20:48:41 (29221): run_atlas exited; CPU time 48446.862561
20:48:41 (29221): called boinc_finish(0)

</stderr_txt>
]]>

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