Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:07:39 (1228837): wrapper (7.7.26015): starting
03:07:39 (1228837): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:07:39] Arguments: --nthreads 8
[2025-06-03 03:07:39] Threads: 8
[2025-06-03 03:07:39] Checking for CVMFS
[2025-06-03 03:07:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:07:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:07:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:07:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:07:41] 2.12.6.0 3036893 21540 438048 146733 3 294 32738663 32935937 12274 16776704 0 106337764 99.637 95971573 24436 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 03:07:41] CVMFS is ok
[2025-06-03 03:07:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:07:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:07:41] Further information can be found at the LHC@home message board.
[2025-06-03 03:07:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:07:41] Checking for apptainer binary...
[2025-06-03 03:07:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:07:41] Running /usr/bin/apptainer --version
[2025-06-03 03:07:41] apptainer version 1.4.1-1.el9
[2025-06-03 03:07:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:07:41] c6-12-29-4.aglt2.org
[2025-06-03 03:07:41] apptainer works
[2025-06-03 03:07:41] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:07:41] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:07:41] Starting ATLAS job with PandaID=6677456603
[2025-06-03 03:07:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 04:29:54]  *** The last 200 lines of the pilot log: ***
[2025-06-03 04:29:54]  is_tar=False
[2025-06-03 04:29:54]  lfn=log.45006595._019088.job.log.tgz.1
[2025-06-03 04:29:54]  mtime=0
[2025-06-03 04:29:54]  protocol_id=None
[2025-06-03 04:29:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 04:29:54]  replicas=None
[2025-06-03 04:29:54]  scope=mc23_13p6TeV
[2025-06-03 04:29:54]  status=None
[2025-06-03 04:29:54]  status_code=0
[2025-06-03 04:29:54]  storage_token=
[2025-06-03 04:29:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677456603/log.45006595._019088.job.log.tgz.1
[2025-06-03 04:29:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/d7/log.45006595._019088.job.log.tgz.1
[2025-06-03 04:29:54]  workdir=None
[2025-06-03 04:29:54] ]
[2025-06-03 04:29:54] 2025-06-03 08:29:31,873 | INFO     | transferring file log.45006595._019088.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677456603/log.45006595._019088.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 04:29:54] 2025-06-03 08:29:31,873 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677456603/log.45006595._019088.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._019088.job
[2025-06-03 04:29:54] 2025-06-03 08:29:31,891 | INFO     | adding to output.list: log.45006595._019088.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/d7/log.45006595._019088.job.log.tg
[2025-06-03 04:29:54] 2025-06-03 08:29:31,891 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 04:29:54] 2025-06-03 08:29:31,892 | INFO     | summary of transferred files:
[2025-06-03 04:29:54] 2025-06-03 08:29:31,892 | INFO     |  -- lfn=log.45006595._019088.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 04:29:54] 2025-06-03 08:29:31,892 | INFO     | stage-out finished correctly
[2025-06-03 04:29:54] 2025-06-03 08:29:32,902 | INFO     | PID=1232859 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 04:29:54] 2025-06-03 08:29:32,902 | INFO     | .. there are 13 such processes running
[2025-06-03 04:29:54] 2025-06-03 08:29:33,290 | INFO     | monitor loop #351: job 0:6677456603 is in state 'finished'
[2025-06-03 04:29:54] 2025-06-03 08:29:33,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:29:54] 2025-06-03 08:29:34,357 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 04:29:54] 2025-06-03 08:29:34,494 | INFO     | job 6677456603 has state=finished
[2025-06-03 04:29:54] 2025-06-03 08:29:34,494 | INFO     | preparing for final server update for job 6677456603 in state='finished'
[2025-06-03 04:29:54] 2025-06-03 08:29:34,609 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 04:29:54] 2025-06-03 08:29:34,610 | INFO     | this job has now completed (state=finished)
[2025-06-03 04:29:54] 2025-06-03 08:29:34,610 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 04:29:54] 2025-06-03 08:29:34,610 | INFO     | log transfer has been attempted: DONE
[2025-06-03 04:29:54] 2025-06-03 08:29:34,610 | INFO     | job 6677456603 has finished - writing final server update
[2025-06-03 04:29:54] 2025-06-03 08:29:34,615 | INFO     | total number of processed events: 400 (read)
[2025-06-03 04:29:54] 2025-06-03 08:29:34,642 | INFO     | executing command: lscpu
[2025-06-03 04:29:54] 2025-06-03 08:29:34,714 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 04:29:54] 2025-06-03 08:29:35,797 | INFO     | monitor loop #352: job 0:6677456603 is in state 'finished'
[2025-06-03 04:29:54] 2025-06-03 08:29:35,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:29:54] 2025-06-03 08:29:38,304 | INFO     | monitor loop #353: job 0:6677456603 is in state 'finished'
[2025-06-03 04:29:54] 2025-06-03 08:29:38,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:29:54] 2025-06-03 08:29:40,710 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 04:29:54] 2025-06-03 08:29:40,710 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677456603/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 04:29:54] 2025-06-03 08:29:40,711 | INFO     | extracted standard info from prmon json
[2025-06-03 04:29:54] 2025-06-03 08:29:40,711 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 04:29:54] 2025-06-03 08:29:40,711 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 04:29:54] 2025-06-03 08:29:40,711 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 04:29:54] 2025-06-03 08:29:40,711 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 04:29:54] 2025-06-03 08:29:40,714 | INFO     | fitting pss+swap vs Time
[2025-06-03 04:29:54] 2025-06-03 08:29:40,714 | INFO     | sum of square deviations: 120605052.0
[2025-06-03 04:29:54] 2025-06-03 08:29:40,714 | INFO     | sum of deviations: 8031838097.0
[2025-06-03 04:29:54] 2025-06-03 08:29:40,714 | INFO     | mean x: 1748937014.0
[2025-06-03 04:29:54] 2025-06-03 08:29:40,714 | INFO     | mean y: 2131058.6301369863
[2025-06-03 04:29:54] 2025-06-03 08:29:40,715 | INFO     | -- intersect: -116470427141.49089
[2025-06-03 04:29:54] 2025-06-03 08:29:40,715 | INFO     | intersect: -116470427141.49089
[2025-06-03 04:29:54] 2025-06-03 08:29:40,715 | INFO     | chi2: 1.1249322433774602
[2025-06-03 04:29:54] 2025-06-03 08:29:40,715 | INFO     | -- intersect: -116470427141.49089
[2025-06-03 04:29:54] 2025-06-03 08:29:40,716 | INFO     | current memory leak: 66.60 B/s (using 73 data points, chi2=1.12)
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | ..............................
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | . Timing measurements:
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | . get job = 0 s
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | . initial setup = 3 s
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | . payload setup = 11 s
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | . stage-in = 0 s
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | . payload execution = 4862 s
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | . stage-out = 0 s
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | . log creation = 0 s
[2025-06-03 04:29:54] 2025-06-03 08:29:40,717 | INFO     | ..............................
[2025-06-03 04:29:54] 2025-06-03 08:29:41,258 | INFO     | 
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | job summary report
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | --------------------------------------------------
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | PanDA job id: 6677456603
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | task id: 45006595
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | errors: (none)
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | pilot state: finished 
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | transexitcode: 0
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | exeerrorcode: 0
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | exeerrordiag: 
[2025-06-03 04:29:54] 2025-06-03 08:29:41,259 | INFO     | exitcode: 0
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | exitmsg: OK
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | cpuconsumptiontime: 31204 s
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | nevents: 400
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | neventsw: 0
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | pid: 1239316
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | pgrp: 1239316
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | corecount: 8
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | event service: False
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | sizes: {0: 2405182, 8: 2405388, 11: 2405416, 4878: 2431556, 4879: 2440497, 4882: 2440553, 4888: 2440851}
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | --------------------------------------------------
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | 
[2025-06-03 04:29:54] 2025-06-03 08:29:41,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 04:29:54] 2025-06-03 08:29:41,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 04:29:54] 2025-06-03 08:29:41,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 04:29:54] 2025-06-03 08:29:41,284 | INFO     | job 6677456603 has completed (purged errors)
[2025-06-03 04:29:54] 2025-06-03 08:29:41,284 | INFO     | overall cleanup function is called
[2025-06-03 04:29:54] 2025-06-03 08:29:42,298 | INFO     | --- collectZombieJob: --- 10, [1239316]
[2025-06-03 04:29:54] 2025-06-03 08:29:42,299 | INFO     | zombie collector waiting for pid 1239316
[2025-06-03 04:29:54] 2025-06-03 08:29:42,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 04:29:54] 2025-06-03 08:29:42,299 | INFO     | collected zombie processes
[2025-06-03 04:29:54] 2025-06-03 08:29:42,299 | INFO     | will attempt to kill all subprocesses of pid=1239316
[2025-06-03 04:29:54] 2025-06-03 08:29:42,677 | INFO     | process IDs to be killed: [1239316] (in reverse order)
[2025-06-03 04:29:54] 2025-06-03 08:29:42,793 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 04:29:54] 2025-06-03 08:29:42,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 04:29:54] 2025-06-03 08:29:42,811 | INFO     | did not find any defunct processes belonging to 1239316
[2025-06-03 04:29:54] 2025-06-03 08:29:42,825 | INFO     | did not find any defunct processes belonging to 1239316
[2025-06-03 04:29:54] 2025-06-03 08:29:42,826 | INFO     | ready for new job
[2025-06-03 04:29:54] 2025-06-03 08:29:42,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 04:29:54] 2025-06-03 08:29:42,827 | INFO     | **************************************
[2025-06-03 04:29:54] 2025-06-03 08:29:42,828 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 04:29:54] 2025-06-03 08:29:42,828 | INFO     | **************************************
[2025-06-03 04:29:54] 2025-06-03 08:29:42,828 | INFO     | 
[2025-06-03 04:29:54] 2025-06-03 08:29:42,847 | INFO     | architecture information:
[2025-06-03 04:29:54] 2025-06-03 08:29:42,848 | INFO     | executing command: cat /etc/os-release
[2025-06-03 04:29:54] 2025-06-03 08:29:42,864 | INFO     | cat /etc/os-release:
[2025-06-03 04:29:54] NAME="CentOS Linux"
[2025-06-03 04:29:54] VERSION="7 (Core)"
[2025-06-03 04:29:54] ID="centos"
[2025-06-03 04:29:54] ID_LIKE="rhel fedora"
[2025-06-03 04:29:54] VERSION_ID="7"
[2025-06-03 04:29:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 04:29:54] ANSI_COLOR="0;31"
[2025-06-03 04:29:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 04:29:54] HOME_URL="https://www.centos.org/"
[2025-06-03 04:29:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 04:29:54] 
[2025-06-03 04:29:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 04:29:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 04:29:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 04:29:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 04:29:54] 
[2025-06-03 04:29:54] 2025-06-03 08:29:42,864 | INFO     | **************************************
[2025-06-03 04:29:54] 2025-06-03 08:29:43,368 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 04:29:54] 2025-06-03 08:29:43,390 | INFO     | sufficient remaining disk space (90877984768 B)
[2025-06-03 04:29:54] 2025-06-03 08:29:43,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 04:29:54] 2025-06-03 08:29:43,390 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 04:29:54] 2025-06-03 08:29:43,390 | INFO     | update_server=False
[2025-06-03 04:29:54] 2025-06-03 08:29:43,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 04:29:54] 2025-06-03 08:29:43,390 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 04:29:54] 2025-06-03 08:29:43,391 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 04:29:54] 2025-06-03 08:29:43,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 04:29:54] 2025-06-03 08:29:43,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 04:29:54] 2025-06-03 08:29:43,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 04:29:54] 2025-06-03 08:29:43,891 | INFO     | all data control threads have been joined
[2025-06-03 04:29:54] 2025-06-03 08:29:44,028 | INFO     | all payload control threads have been joined
[2025-06-03 04:29:54] 2025-06-03 08:29:44,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:29:54] 2025-06-03 08:29:44,327 | INFO     | aborting loop
[2025-06-03 04:29:54] 2025-06-03 08:29:44,397 | INFO     | [job] retrieve thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:44,501 | INFO     | [job] validate thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:44,791 | INFO     | [data] copytool_in thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:44,897 | INFO     | [data] control thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:44,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:44,899 | INFO     | all job control threads have been joined
[2025-06-03 04:29:54] 2025-06-03 08:29:44,906 | INFO     | [payload] validate_post thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:44,950 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:44,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 04:29:54] 2025-06-03 08:29:45,035 | INFO     | [payload] control thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:45,333 | INFO     | [job] job monitor thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:45,398 | INFO     | [data] copytool_out thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:45,398 | INFO     | [payload] failed_post thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:45,542 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:45,658 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:45,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:29:54] 2025-06-03 08:29:45,905 | INFO     | [job] control thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:46,840 | INFO     | [job] queue monitor thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:48,992 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 04:29:54] 2025-06-03 08:29:49,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696246060864)>', '<ExcThread(monitor, started 139695019259648)>']
[2025-06-03 04:29:54] 2025-06-03 08:29:50,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 04:29:54] 2025-06-03 08:29:50,433 | INFO     | [monitor] control thread has ended
[2025-06-03 04:29:54] 2025-06-03 08:29:54,644 | INFO     | all workflow threads have been joined
[2025-06-03 04:29:54] 2025-06-03 08:29:54,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 04:29:54] 2025-06-03 08:29:54,645 | INFO     | traces error code: 0
[2025-06-03 04:29:54] 2025-06-03 08:29:54,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 04:29:54] 2025-06-03 08:29:54,829 [wrapper] ==== pilot stdout END ====
[2025-06-03 04:29:54] 2025-06-03 08:29:54,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 04:29:54] 2025-06-03 08:29:54,833 [wrapper] pilotpid: 1232859
[2025-06-03 04:29:54] 2025-06-03 08:29:54,835 [wrapper] Pilot exit status: 0
[2025-06-03 04:29:54] 2025-06-03 08:29:54,846 [wrapper] pandaids: 6677456603
[2025-06-03 04:29:54] 2025-06-03 08:29:54,908 [wrapper] cleanup supervisor_pilot 1618287 1232860
[2025-06-03 04:29:54] 2025-06-03 08:29:54,910 [wrapper] Test setup, not cleaning
[2025-06-03 04:29:54] 2025-06-03 08:29:54,913 [wrapper] apfmon messages muted
[2025-06-03 04:29:54] 2025-06-03 08:29:54,915 [wrapper] ==== wrapper stdout END ====
[2025-06-03 04:29:54] 2025-06-03 08:29:54,916 [wrapper] ==== wrapper stderr END ====
[2025-06-03 04:29:54]  *** Error codes and diagnostics ***
[2025-06-03 04:29:54]     "exeErrorCode": 0,
[2025-06-03 04:29:54]     "exeErrorDiag": "",
[2025-06-03 04:29:54]     "pilotErrorCode": 0,
[2025-06-03 04:29:54]     "pilotErrorDiag": "",
[2025-06-03 04:29:54]  *** Listing of results directory ***
[2025-06-03 04:29:54] total 389944
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 00:08 pilot3.tar.gz
[2025-06-03 04:29:54] -rwx------. 1 boincer umatlas     37140 Jun  3 00:09 runpilot2-wrapper.sh
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 00:09 queuedata.json
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas       100 Jun  3 03:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 04:29:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 03:07 run_atlas
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas       105 Jun  3 03:07 job.xml
[2025-06-03 04:29:54] -rw-r--r--. 2 boincer umatlas 214325726 Jun  3 03:07 EVNT.45006593._000764.pool.root.1
[2025-06-03 04:29:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:07 start_atlas.sh
[2025-06-03 04:29:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 03:07 shared
[2025-06-03 04:29:54] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 03:07 input.tar.gz
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas         0 Jun  3 03:07 boinc_lockfile
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 03:07 pandaJob.out
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas    986901 Jun  3 03:07 agis_schedconf.cvmfs.json
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas   1603667 Jun  3 03:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 04:29:54] drwx------. 4 boincer umatlas      4096 Jun  3 03:07 pilot3
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas 179586753 Jun  3 04:28 HITS.45006595._019088.pool.root.1
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas       530 Jun  3 04:28 boinc_task_state.xml
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas      6860 Jun  3 04:29 init_data.xml
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas      1036 Jun  3 04:29 memory_monitor_summary.json
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas        95 Jun  3 04:29 pilot_heartbeat.json
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas    302526 Jun  3 04:29 log.45006595._019088.job.log.tgz.1
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas      7720 Jun  3 04:29 heartbeat.json
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 04:29 boinc_mmap_file
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas        27 Jun  3 04:29 wrapper_checkpoint.txt
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas      4476 Jun  3 04:29 pilotlog.txt
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas    476280 Jun  3 04:29 log.45006595._019088.job.log.1
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas       357 Jun  3 04:29 output.list
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas       620 Jun  3 04:29 runtime_log
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas    798720 Jun  3 04:29 result.tar.gz
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas      8669 Jun  3 04:29 runtime_log.err
[2025-06-03 04:29:54] -rw-------. 1 boincer umatlas       655 Jun  3 04:29 be8KDm68Xg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtKXKDmHsfsan.diag
[2025-06-03 04:29:54] -rw-r--r--. 1 boincer umatlas     21599 Jun  3 04:29 stderr.txt
[2025-06-03 04:29:55] HITS file was successfully produced:
[2025-06-03 04:29:55] -rw-------. 1 boincer umatlas 179586753 Jun  3 04:28 shared/HITS.pool.root.1
[2025-06-03 04:29:55]  *** Contents of shared directory: ***
[2025-06-03 04:29:55] total 385984
[2025-06-03 04:29:55] -rw-r--r--. 2 boincer umatlas 214325726 Jun  3 03:07 ATLAS.root_0
[2025-06-03 04:29:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 03:07 start_atlas.sh
[2025-06-03 04:29:55] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 03:07 input.tar.gz
[2025-06-03 04:29:55] -rw-------. 1 boincer umatlas 179586753 Jun  3 04:28 HITS.pool.root.1
[2025-06-03 04:29:55] -rw-------. 1 boincer umatlas    798720 Jun  3 04:29 result.tar.gz
04:29:56 (1228837): run_atlas exited; CPU time 31409.572803
04:29:56 (1228837): called boinc_finish(0)

</stderr_txt>
]]>

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