Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:09:14 (3213398): wrapper (7.7.26015): starting
17:09:14 (3213398): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 17:09:14] Arguments: --nthreads 4
[2025-06-03 17:09:14] Threads: 4
[2025-06-03 17:09:14] Checking for CVMFS
[2025-06-03 17:09:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:09:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:09:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:09:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:09:14] 2.9.2.0 2764630 1185 84744 146743 3 187 28866238 36864000 0 130560 0 1198779 99.994 291467 22479 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-03 17:09:14] CVMFS is ok
[2025-06-03 17:09:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 17:09:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 17:09:14] Further information can be found at the LHC@home message board.
[2025-06-03 17:09:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:09:14] Checking for apptainer binary...
[2025-06-03 17:09:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:09:14] Running /usr/bin/apptainer --version
[2025-06-03 17:09:14] apptainer version 1.3.6-6.1
[2025-06-03 17:09:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:09:14] cosA131
[2025-06-03 17:09:14] apptainer works
[2025-06-03 17:09:14] Set ATHENA_PROC_NUMBER=4
[2025-06-03 17:09:14] Set ATHENA_CORE_NUMBER=4
[2025-06-03 17:09:14] Starting ATLAS job with PandaID=6666242961
[2025-06-03 17:09:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:37:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:37:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 18:37:20]  is_altstaged=None
[2025-06-03 18:37:20]  is_tar=False
[2025-06-03 18:37:20]  lfn=log.44871837._057286.job.log.tgz.1
[2025-06-03 18:37:20]  mtime=0
[2025-06-03 18:37:20]  protocol_id=None
[2025-06-03 18:37:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 18:37:20]  replicas=None
[2025-06-03 18:37:20]  scope=mc23_13p6TeV
[2025-06-03 18:37:20]  status=None
[2025-06-03 18:37:20]  status_code=0
[2025-06-03 18:37:20]  storage_token=
[2025-06-03 18:37:20]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6666242961/log.44871837._057286.job.log.tgz.1
[2025-06-03 18:37:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/dd/log.44871837._057286.job.log.tgz.1
[2025-06-03 18:37:20]  workdir=None
[2025-06-03 18:37:20] ]
[2025-06-03 18:37:20] 2025-06-03 16:36:51,544 | INFO     | transferring file log.44871837._057286.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6666242961/log.44871837._057286.job.log.tgz.1 to /local/data/boinc/
[2025-06-03 18:37:20] 2025-06-03 16:36:51,544 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6666242961/log.44871837._057286.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0572
[2025-06-03 18:37:20] 2025-06-03 16:36:51,563 | INFO     | adding to output.list: log.44871837._057286.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/dd/log.44871837._057286.job.log.tg
[2025-06-03 18:37:20] 2025-06-03 16:36:51,564 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 18:37:20] 2025-06-03 16:36:51,564 | INFO     | summary of transferred files:
[2025-06-03 18:37:20] 2025-06-03 16:36:51,564 | INFO     |  -- lfn=log.44871837._057286.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 18:37:20] 2025-06-03 16:36:51,564 | INFO     | stage-out finished correctly
[2025-06-03 18:37:20] 2025-06-03 16:36:53,773 | INFO     | monitor loop #404: job 0:6666242961 is in state 'finished'
[2025-06-03 18:37:20] 2025-06-03 16:36:53,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:37:20] 2025-06-03 16:36:54,386 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 18:37:20] 2025-06-03 16:36:55,205 | INFO     | job 6666242961 has state=finished
[2025-06-03 18:37:20] 2025-06-03 16:36:55,206 | INFO     | preparing for final server update for job 6666242961 in state='finished'
[2025-06-03 18:37:20] 2025-06-03 16:36:55,206 | INFO     | this job has now completed (state=finished)
[2025-06-03 18:37:20] 2025-06-03 16:36:55,206 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 18:37:20] 2025-06-03 16:36:55,206 | INFO     | log transfer has been attempted: DONE
[2025-06-03 18:37:20] 2025-06-03 16:36:55,206 | INFO     | job 6666242961 has finished - writing final server update
[2025-06-03 18:37:20] 2025-06-03 16:36:55,206 | INFO     | total number of processed events: 400 (read)
[2025-06-03 18:37:20] 2025-06-03 16:36:55,208 | INFO     | executing command: lscpu
[2025-06-03 18:37:20] 2025-06-03 16:36:55,229 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 18:37:20] 2025-06-03 16:36:56,276 | INFO     | monitor loop #405: job 0:6666242961 is in state 'finished'
[2025-06-03 18:37:20] 2025-06-03 16:36:56,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:37:20] 2025-06-03 16:36:58,779 | INFO     | monitor loop #406: job 0:6666242961 is in state 'finished'
[2025-06-03 18:37:20] 2025-06-03 16:36:58,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:37:20] 2025-06-03 16:36:59,796 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 18:37:20] 2025-06-03 16:36:59,797 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6666242961/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:37:20] 2025-06-03 16:36:59,797 | INFO     | extracted standard info from prmon json
[2025-06-03 18:37:20] 2025-06-03 16:36:59,797 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:37:20] 2025-06-03 16:36:59,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:37:20] 2025-06-03 16:36:59,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:37:20] 2025-06-03 16:36:59,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:37:20] 2025-06-03 16:36:59,798 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:37:20] 2025-06-03 16:36:59,798 | INFO     | sum of square deviations: 152858680.0
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | sum of deviations: 767662613.0
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | mean x: 1748966069.0
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | mean y: 2410952.734177215
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | -- intersect: -8780968980.789248
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | intersect: -8780968980.789248
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | chi2: 0.018957906349352658
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | -- intersect: -8780968980.789248
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | current memory leak: 5.02 B/s (using 79 data points, chi2=0.02)
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | ..............................
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | . Timing measurements:
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | . get job = 0 s
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | . initial setup = 1 s
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | . payload setup = 4 s
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | . stage-in = 0 s
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | . payload execution = 5226 s
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | . stage-out = 0 s
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | . log creation = 0 s
[2025-06-03 18:37:20] 2025-06-03 16:36:59,799 | INFO     | ..............................
[2025-06-03 18:37:20] 2025-06-03 16:36:59,840 | INFO     | 
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | job summary report
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | --------------------------------------------------
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | PanDA job id: 6666242961
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | task id: 44871837
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | errors: (none)
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | pilot state: finished 
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | transexitcode: 0
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | exeerrorcode: 0
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | exeerrordiag: 
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | exitcode: 0
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | exitmsg: OK
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | cpuconsumptiontime: 19713 s
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | nevents: 400
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | neventsw: 0
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | pid: 3223760
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | pgrp: 3223760
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | corecount: 4
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | event service: False
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | sizes: {0: 2405237, 4: 2405443, 11: 2405471, 5235: 2431995, 5236: 2440942, 5239: 2440998, 5244: 2441296}
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | --------------------------------------------------
[2025-06-03 18:37:20] 2025-06-03 16:36:59,841 | INFO     | 
[2025-06-03 18:37:20] 2025-06-03 16:36:59,842 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,861 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:37:20] 2025-06-03 16:36:59,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,861 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:37:20] 2025-06-03 16:36:59,861 | INFO     | job 6666242961 has completed (purged errors)
[2025-06-03 18:37:20] 2025-06-03 16:36:59,861 | INFO     | overall cleanup function is called
[2025-06-03 18:37:20] 2025-06-03 16:37:00,868 | INFO     | --- collectZombieJob: --- 10, [3223760]
[2025-06-03 18:37:20] 2025-06-03 16:37:00,868 | INFO     | zombie collector waiting for pid 3223760
[2025-06-03 18:37:20] 2025-06-03 16:37:00,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:37:20] 2025-06-03 16:37:00,868 | INFO     | collected zombie processes
[2025-06-03 18:37:20] 2025-06-03 16:37:00,868 | INFO     | will attempt to kill all subprocesses of pid=3223760
[2025-06-03 18:37:20] 2025-06-03 16:37:00,920 | INFO     | process IDs to be killed: [3223760] (in reverse order)
[2025-06-03 18:37:20] 2025-06-03 16:37:00,954 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:37:20] 2025-06-03 16:37:00,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:37:20] 2025-06-03 16:37:00,956 | INFO     | did not find any defunct processes belonging to 3223760
[2025-06-03 18:37:20] 2025-06-03 16:37:00,958 | INFO     | did not find any defunct processes belonging to 3223760
[2025-06-03 18:37:20] 2025-06-03 16:37:00,958 | INFO     | ready for new job
[2025-06-03 18:37:20] 2025-06-03 16:37:00,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:37:20] 2025-06-03 16:37:00,959 | INFO     | **************************************
[2025-06-03 18:37:20] 2025-06-03 16:37:00,959 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:37:20] 2025-06-03 16:37:00,959 | INFO     | **************************************
[2025-06-03 18:37:20] 2025-06-03 16:37:00,959 | INFO     | 
[2025-06-03 18:37:20] 2025-06-03 16:37:00,959 | INFO     | architecture information:
[2025-06-03 18:37:20] 2025-06-03 16:37:00,959 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:37:20] 2025-06-03 16:37:00,973 | INFO     | cat /etc/os-release:
[2025-06-03 18:37:20] NAME="CentOS Linux"
[2025-06-03 18:37:20] VERSION="7 (Core)"
[2025-06-03 18:37:20] ID="centos"
[2025-06-03 18:37:20] ID_LIKE="rhel fedora"
[2025-06-03 18:37:20] VERSION_ID="7"
[2025-06-03 18:37:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:37:20] ANSI_COLOR="0;31"
[2025-06-03 18:37:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:37:20] HOME_URL="https://www.centos.org/"
[2025-06-03 18:37:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:37:20] 
[2025-06-03 18:37:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:37:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:37:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:37:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:37:20] 
[2025-06-03 18:37:20] 2025-06-03 16:37:00,973 | INFO     | **************************************
[2025-06-03 18:37:20] 2025-06-03 16:37:01,477 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-03 18:37:20] 2025-06-03 16:37:01,494 | INFO     | sufficient remaining disk space (326460506112 B)
[2025-06-03 18:37:20] 2025-06-03 16:37:01,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:37:20] 2025-06-03 16:37:01,494 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:37:20] 2025-06-03 16:37:01,494 | INFO     | update_server=False
[2025-06-03 18:37:20] 2025-06-03 16:37:01,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:37:20] 2025-06-03 16:37:01,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:37:20] 2025-06-03 16:37:01,495 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:37:20] 2025-06-03 16:37:01,495 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:37:20] 2025-06-03 16:37:01,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:37:20] 2025-06-03 16:37:01,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:37:20] 2025-06-03 16:37:01,950 | INFO     | all payload control threads have been joined
[2025-06-03 18:37:20] 2025-06-03 16:37:02,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:37:20] 2025-06-03 16:37:02,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:37:20] 2025-06-03 16:37:02,288 | INFO     | aborting loop
[2025-06-03 18:37:20] 2025-06-03 16:37:02,344 | INFO     | all data control threads have been joined
[2025-06-03 18:37:20] 2025-06-03 16:37:02,497 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:02,500 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:02,755 | INFO     | all job control threads have been joined
[2025-06-03 18:37:20] 2025-06-03 16:37:02,783 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:02,796 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:02,956 | INFO     | [payload] control thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:03,293 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:03,349 | INFO     | [data] control thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:03,501 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:03,758 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:03,761 | INFO     | [job] control thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:03,798 | INFO     | [job] validate thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:03,896 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:03,903 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:04,128 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:04,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:37:20] 2025-06-03 16:37:08,945 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:12,340 | INFO     | job.realtimelogging is not enabled
[2025-06-03 18:37:20] 2025-06-03 16:37:13,346 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:37:20] 2025-06-03 16:37:14,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361973860160)>', '<ExcThread(monitor, started 140361166989056)>']
[2025-06-03 18:37:20] 2025-06-03 16:37:15,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:37:20] 2025-06-03 16:37:15,554 | INFO     | [monitor] control thread has ended
[2025-06-03 18:37:20] 2025-06-03 16:37:19,933 | INFO     | all workflow threads have been joined
[2025-06-03 18:37:20] 2025-06-03 16:37:19,933 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:37:20] 2025-06-03 16:37:19,933 | INFO     | traces error code: 0
[2025-06-03 18:37:20] 2025-06-03 16:37:19,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:37:20] 2025-06-03 16:37:20,015 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:37:20] 2025-06-03 16:37:20,019 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:37:20] 2025-06-03 16:37:20,023 [wrapper] pilotpid: 3217111
[2025-06-03 18:37:20] 2025-06-03 16:37:20,027 [wrapper] Pilot exit status: 0
[2025-06-03 18:37:20] 2025-06-03 16:37:20,038 [wrapper] pandaids: 6666242961
[2025-06-03 18:37:20] 2025-06-03 16:37:20,061 [wrapper] cleanup supervisor_pilot 3236437 3217112
[2025-06-03 18:37:20] 2025-06-03 16:37:20,064 [wrapper] Test setup, not cleaning
[2025-06-03 18:37:20] 2025-06-03 16:37:20,068 [wrapper] apfmon messages muted
[2025-06-03 18:37:20] 2025-06-03 16:37:20,071 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:37:20] 2025-06-03 16:37:20,075 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:37:20]  *** Error codes and diagnostics ***
[2025-06-03 18:37:20]     "exeErrorCode": 0,
[2025-06-03 18:37:20]     "exeErrorDiag": "",
[2025-06-03 18:37:20]     "pilotErrorCode": 0,
[2025-06-03 18:37:20]     "pilotErrorDiag": "",
[2025-06-03 18:37:20]  *** Listing of results directory ***
[2025-06-03 18:37:20] total 418236
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc    495897 May 26 23:09 pilot3.tar.gz
[2025-06-03 18:37:20] -rwx------ 1 boinc boinc     37140 May 26 23:43 runpilot2-wrapper.sh
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc      5111 May 26 23:43 queuedata.json
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc       100 Jun  3 17:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:37:20] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 17:09 run_atlas
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc       105 Jun  3 17:09 job.xml
[2025-06-03 18:37:20] -rw-r--r-- 2 boinc boinc 225145072 Jun  3 17:09 EVNT.44871834._002272.pool.root.1
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc      6861 Jun  3 17:09 init_data.xml
[2025-06-03 18:37:20] drwxrwx--x 2 boinc boinc      4096 Jun  3 17:09 shared
[2025-06-03 18:37:20] -rw-r--r-- 2 boinc boinc    508871 Jun  3 17:09 input.tar.gz
[2025-06-03 18:37:20] -rw-r--r-- 2 boinc boinc     15093 Jun  3 17:09 start_atlas.sh
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc         0 Jun  3 17:09 boinc_lockfile
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc      2559 Jun  3 17:09 pandaJob.out
[2025-06-03 18:37:20] -rw------- 1 boinc boinc    982724 Jun  3 17:09 agis_schedconf.cvmfs.json
[2025-06-03 18:37:20] -rw------- 1 boinc boinc   1603667 Jun  3 17:09 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:37:20] drwx------ 4 boinc boinc      4096 Jun  3 17:09 pilot3
[2025-06-03 18:37:20] -rw------- 1 boinc boinc 197768536 Jun  3 18:36 HITS.44871837._057286.pool.root.1
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc       529 Jun  3 18:36 boinc_task_state.xml
[2025-06-03 18:37:20] -rw------- 1 boinc boinc      1022 Jun  3 18:36 memory_monitor_summary.json
[2025-06-03 18:37:20] -rw------- 1 boinc boinc        95 Jun  3 18:36 pilot_heartbeat.json
[2025-06-03 18:37:20] -rw------- 1 boinc boinc    254317 Jun  3 18:36 log.44871837._057286.job.log.tgz.1
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc      8192 Jun  3 18:36 boinc_mmap_file
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc        27 Jun  3 18:36 wrapper_checkpoint.txt
[2025-06-03 18:37:20] -rw------- 1 boinc boinc      7659 Jun  3 18:36 heartbeat.json
[2025-06-03 18:37:20] -rw------- 1 boinc boinc      4552 Jun  3 18:37 pilotlog.txt
[2025-06-03 18:37:20] -rw------- 1 boinc boinc    508063 Jun  3 18:37 log.44871837._057286.job.log.1
[2025-06-03 18:37:20] -rw------- 1 boinc boinc       357 Jun  3 18:37 output.list
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc       620 Jun  3 18:37 runtime_log
[2025-06-03 18:37:20] -rw------- 1 boinc boinc    778240 Jun  3 18:37 result.tar.gz
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc      8738 Jun  3 18:37 runtime_log.err
[2025-06-03 18:37:20] -rw------- 1 boinc boinc       659 Jun  3 18:37 ihXKDmMmud7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfrQKDmtVktPo.diag
[2025-06-03 18:37:20] -rw-r--r-- 1 boinc boinc     21343 Jun  3 18:37 stderr.txt
[2025-06-03 18:37:20] HITS file was successfully produced:
[2025-06-03 18:37:20] -rw------- 1 boinc boinc 197768536 Jun  3 18:36 shared/HITS.pool.root.1
[2025-06-03 18:37:20]  *** Contents of shared directory: ***
[2025-06-03 18:37:20] total 414292
[2025-06-03 18:37:20] -rw-r--r-- 2 boinc boinc 225145072 Jun  3 17:09 ATLAS.root_0
[2025-06-03 18:37:20] -rw-r--r-- 2 boinc boinc    508871 Jun  3 17:09 input.tar.gz
[2025-06-03 18:37:20] -rw-r--r-- 2 boinc boinc     15093 Jun  3 17:09 start_atlas.sh
[2025-06-03 18:37:20] -rw------- 1 boinc boinc 197768536 Jun  3 18:36 HITS.pool.root.1
[2025-06-03 18:37:20] -rw------- 1 boinc boinc    778240 Jun  3 18:37 result.tar.gz
18:37:21 (3213398): run_atlas exited; CPU time 19737.673126
18:37:21 (3213398): called boinc_finish(0)

</stderr_txt>
]]>

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