Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:41:45 (884132): wrapper (7.7.26015): starting
01:41:45 (884132): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 01:41:45] Arguments: --nthreads 4
[2025-06-05 01:41:45] Threads: 4
[2025-06-05 01:41:45] Checking for CVMFS
[2025-06-05 01:41:45] No cvmfs_config command found, will try listing directly
[2025-06-05 01:41:45] CVMFS is ok
[2025-06-05 01:41:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:41:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:41:45] Further information can be found at the LHC@home message board.
[2025-06-05 01:41:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:41:45] Checking for apptainer binary...
[2025-06-05 01:41:45] which: no apptainer in ((null))
[2025-06-05 01:41:45] apptainer is not installed, using version from CVMFS
[2025-06-05 01:41:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:41:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-06-05 01:41:45] apptainer works
[2025-06-05 01:41:45] Set ATHENA_PROC_NUMBER=4
[2025-06-05 01:41:45] Set ATHENA_CORE_NUMBER=4
[2025-06-05 01:41:45] Starting ATLAS job with PandaID=6677455254
[2025-06-05 01:41:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:05:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:05:36] 2025-06-05 02:02:51,558 | INFO     | monitor loop #586: job 0:6677455254 is in state 'finished'
[2025-06-05 04:05:36] 2025-06-05 02:02:51,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:05:36] 2025-06-05 02:02:53,128 | INFO     | PID=888129 has CPU usage=21.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 04:05:36] 2025-06-05 02:02:53,128 | INFO     | .. there are 14 such processes running
[2025-06-05 04:05:36] 2025-06-05 02:02:54,062 | INFO     | monitor loop #587: job 0:6677455254 is in state 'finished'
[2025-06-05 04:05:36] 2025-06-05 02:02:54,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:05:36] 2025-06-05 02:02:56,566 | INFO     | monitor loop #588: job 0:6677455254 is in state 'finished'
[2025-06-05 04:05:36] 2025-06-05 02:02:56,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:05:36] 2025-06-05 02:02:57,417 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:05:36] 2025-06-05 02:02:57,418 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6677455254/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:05:36] 2025-06-05 02:02:57,418 | INFO     | extracted standard info from prmon json
[2025-06-05 04:05:36] 2025-06-05 02:02:57,418 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:05:36] 2025-06-05 02:02:57,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:05:36] 2025-06-05 02:02:57,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:05:36] 2025-06-05 02:02:57,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:05:36] 2025-06-05 02:02:57,422 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:05:36] 2025-06-05 02:02:57,422 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 04:05:36] 2025-06-05 02:02:57,423 | INFO     | sum of deviations: 9035627074.000002
[2025-06-05 04:05:36] 2025-06-05 02:02:57,423 | INFO     | mean x: 1749084731.5
[2025-06-05 04:05:36] 2025-06-05 02:02:57,423 | INFO     | mean y: 2313981.8985507246
[2025-06-05 04:05:36] 2025-06-05 02:02:57,423 | INFO     | -- intersect: -19392082465.614475
[2025-06-05 04:05:36] 2025-06-05 02:02:57,423 | INFO     | intersect: -19392082465.614475
[2025-06-05 04:05:36] 2025-06-05 02:02:57,423 | INFO     | chi2: 1.3999811216101323
[2025-06-05 04:05:36] 2025-06-05 02:02:57,424 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,424 | INFO     | sum of deviations: 8733932054.000004
[2025-06-05 04:05:36] 2025-06-05 02:02:57,425 | INFO     | mean x: 1749084579.0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,425 | INFO     | mean y: 2313443.030075188
[2025-06-05 04:05:36] 2025-06-05 02:02:57,425 | INFO     | -- intersect: -20939381322.673443
[2025-06-05 04:05:36] 2025-06-05 02:02:57,425 | INFO     | intersect: -20939381322.673443
[2025-06-05 04:05:36] 2025-06-05 02:02:57,425 | INFO     | chi2: 1.401739651527701
[2025-06-05 04:05:36] 2025-06-05 02:02:57,425 | INFO     | current chi2=1.401739651527701 (change=-0.12561097363556858 %)
[2025-06-05 04:05:36] 2025-06-05 02:02:57,425 | INFO     | right removable region: 132
[2025-06-05 04:05:36] 2025-06-05 02:02:57,426 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,426 | INFO     | sum of deviations: -7605298647.000001
[2025-06-05 04:05:36] 2025-06-05 02:02:57,426 | INFO     | mean x: 1749084884.0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,426 | INFO     | mean y: 2343039.248120301
[2025-06-05 04:05:36] 2025-06-05 02:02:57,427 | INFO     | -- intersect: 18237871968.876938
[2025-06-05 04:05:36] 2025-06-05 02:02:57,427 | INFO     | intersect: 18237871968.876938
[2025-06-05 04:05:36] 2025-06-05 02:02:57,427 | INFO     | chi2: 0.016369242166212376
[2025-06-05 04:05:36] 2025-06-05 02:02:57,427 | INFO     | current chi2=0.016369242166212376 (change=98.83075264990818 %)
[2025-06-05 04:05:36] 2025-06-05 02:02:57,427 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,428 | INFO     | sum of deviations: -5981093920.0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,428 | INFO     | mean x: 1749085036.5
[2025-06-05 04:05:36] 2025-06-05 02:02:57,428 | INFO     | mean y: 2339924.140625
[2025-06-05 04:05:36] 2025-06-05 02:02:57,428 | INFO     | -- intersect: 16090623833.182991
[2025-06-05 04:05:36] 2025-06-05 02:02:57,428 | INFO     | intersect: 16090623833.182991
[2025-06-05 04:05:36] 2025-06-05 02:02:57,428 | INFO     | chi2: 0.014501087301533646
[2025-06-05 04:05:36] 2025-06-05 02:02:57,429 | INFO     | current chi2=0.014501087301533646 (change=11.412592261202988 %)
[2025-06-05 04:05:36] 2025-06-05 02:02:57,429 | INFO     | left removable region: 20
[2025-06-05 04:05:36] 2025-06-05 02:02:57,429 | INFO     | sum of square deviations: 435610028.0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,429 | INFO     | sum of deviations: -3339174099.0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,430 | INFO     | mean x: 1749085158.5
[2025-06-05 04:05:36] 2025-06-05 02:02:57,430 | INFO     | mean y: 2334776.714285714
[2025-06-05 04:05:36] 2025-06-05 02:02:57,430 | INFO     | -- intersect: 13409968859.482714
[2025-06-05 04:05:36] 2025-06-05 02:02:57,430 | INFO     | intersect: 13409968859.482714
[2025-06-05 04:05:36] 2025-06-05 02:02:57,430 | INFO     | chi2: 0.01154959130938473
[2025-06-05 04:05:36] 2025-06-05 02:02:57,430 | INFO     | -- intersect: 13409968859.482714
[2025-06-05 04:05:36] 2025-06-05 02:02:57,430 | INFO     | current memory leak: -7.67 B/s (using 112 data points, chi2=0.01)
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | ..............................
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | . Timing measurements:
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | . get job = 0 s
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | . initial setup = 1 s
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | . payload setup = 9 s
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | . stage-in = 0 s
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | . payload execution = 8417 s
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | . stage-out = 1 s
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | . log creation = 0 s
[2025-06-05 04:05:36] 2025-06-05 02:02:57,431 | INFO     | ..............................
[2025-06-05 04:05:36] 2025-06-05 02:02:57,674 | INFO     | 
[2025-06-05 04:05:36] 2025-06-05 02:02:57,674 | INFO     | job summary report
[2025-06-05 04:05:36] 2025-06-05 02:02:57,674 | INFO     | --------------------------------------------------
[2025-06-05 04:05:36] 2025-06-05 02:02:57,674 | INFO     | PanDA job id: 6677455254
[2025-06-05 04:05:36] 2025-06-05 02:02:57,674 | INFO     | task id: 45006595
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | errors: (none)
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | pilot state: finished 
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | transexitcode: 0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | exeerrorcode: 0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | exeerrordiag: 
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | exitcode: 0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | exitmsg: OK
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | cpuconsumptiontime: 32017 s
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | nevents: 400
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | neventsw: 0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,675 | INFO     | pid: 895664
[2025-06-05 04:05:36] 2025-06-05 02:02:57,676 | INFO     | pgrp: 895664
[2025-06-05 04:05:36] 2025-06-05 02:02:57,676 | INFO     | corecount: 4
[2025-06-05 04:05:36] 2025-06-05 02:02:57,676 | INFO     | event service: False
[2025-06-05 04:05:36] 2025-06-05 02:02:57,676 | INFO     | sizes: {0: 2397350, 1: 2397350, 7: 2397584, 11: 2397612, 8431: 2425658, 8432: 2434621, 8435: 2434805, 8442: 2434975}
[2025-06-05 04:05:36] 2025-06-05 02:02:57,676 | INFO     | --------------------------------------------------
[2025-06-05 04:05:36] 2025-06-05 02:02:57,676 | INFO     | 
[2025-06-05 04:05:36] 2025-06-05 02:02:57,676 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2025-06-05 04:05:36] 2025-06-05 02:02:57,709 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,709 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,709 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,709 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,709 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:05:36] 2025-06-05 02:02:57,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:05:36] 2025-06-05 02:02:57,711 | INFO     | job 6677455254 has completed (purged errors)
[2025-06-05 04:05:36] 2025-06-05 02:02:57,711 | INFO     | overall cleanup function is called
[2025-06-05 04:05:36] 2025-06-05 02:02:58,717 | INFO     | --- collectZombieJob: --- 10, [895664]
[2025-06-05 04:05:36] 2025-06-05 02:02:58,717 | INFO     | zombie collector waiting for pid 895664
[2025-06-05 04:05:36] 2025-06-05 02:02:58,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:05:36] 2025-06-05 02:02:58,717 | INFO     | collected zombie processes
[2025-06-05 04:05:36] 2025-06-05 02:02:58,718 | INFO     | will attempt to kill all subprocesses of pid=895664
[2025-06-05 04:05:36] 2025-06-05 02:02:59,439 | INFO     | process IDs to be killed: [895664] (in reverse order)
[2025-06-05 04:05:36] 2025-06-05 02:02:59,691 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:05:36] 2025-06-05 02:02:59,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:05:36] 2025-06-05 02:02:59,718 | INFO     | did not find any defunct processes belonging to 895664
[2025-06-05 04:05:36] 2025-06-05 02:02:59,739 | INFO     | did not find any defunct processes belonging to 895664
[2025-06-05 04:05:36] 2025-06-05 02:02:59,740 | INFO     | ready for new job
[2025-06-05 04:05:36] 2025-06-05 02:02:59,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:05:36] 2025-06-05 02:02:59,742 | INFO     | **************************************
[2025-06-05 04:05:36] 2025-06-05 02:02:59,742 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:05:36] 2025-06-05 02:02:59,742 | INFO     | **************************************
[2025-06-05 04:05:36] 2025-06-05 02:02:59,742 | INFO     | 
[2025-06-05 04:05:36] 2025-06-05 02:02:59,750 | INFO     | architecture information:
[2025-06-05 04:05:36] 2025-06-05 02:02:59,751 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:05:36] 2025-06-05 02:02:59,774 | INFO     | cat /etc/os-release:
[2025-06-05 04:05:36] NAME="CentOS Linux"
[2025-06-05 04:05:36] VERSION="7 (Core)"
[2025-06-05 04:05:36] ID="centos"
[2025-06-05 04:05:36] ID_LIKE="rhel fedora"
[2025-06-05 04:05:36] VERSION_ID="7"
[2025-06-05 04:05:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:05:36] ANSI_COLOR="0;31"
[2025-06-05 04:05:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:05:36] HOME_URL="https://www.centos.org/"
[2025-06-05 04:05:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:05:36] 
[2025-06-05 04:05:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:05:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:05:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:05:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:05:36] 
[2025-06-05 04:05:36] 2025-06-05 02:02:59,775 | INFO     | **************************************
[2025-06-05 04:05:36] 2025-06-05 02:03:00,277 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2025-06-05 04:05:36] 2025-06-05 02:03:00,303 | INFO     | sufficient remaining disk space (3290510131200 B)
[2025-06-05 04:05:36] 2025-06-05 02:03:00,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:05:36] 2025-06-05 02:03:00,303 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:05:36] 2025-06-05 02:03:00,303 | INFO     | update_server=False
[2025-06-05 04:05:36] 2025-06-05 02:03:00,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:05:36] 2025-06-05 02:03:00,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:05:36] 2025-06-05 02:03:00,304 | INFO     | aborting loop
[2025-06-05 04:05:36] 2025-06-05 02:03:00,640 | INFO     | all data control threads have been joined
[2025-06-05 04:05:36] 2025-06-05 02:03:01,150 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:05:36] 2025-06-05 02:03:01,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:05:36] 2025-06-05 02:03:01,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:05:36] 2025-06-05 02:03:01,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:05:36] 2025-06-05 02:03:01,309 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:01,310 | INFO     | all payload control threads have been joined
[2025-06-05 04:05:36] 2025-06-05 02:03:01,310 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:01,645 | INFO     | [data] control thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:01,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:05:36] 2025-06-05 02:03:01,862 | INFO     | all job control threads have been joined
[2025-06-05 04:05:36] 2025-06-05 02:03:01,892 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:01,935 | INFO     | [job] validate thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:02,100 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:02,227 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:02,249 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:02,316 | INFO     | [payload] control thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:02,525 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:02,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:05:36] 2025-06-05 02:03:02,607 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:02,771 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:02,868 | INFO     | [job] control thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:03,302 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:03,540 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:05,774 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:05:36] 2025-06-05 02:03:07,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22383863060288)>', '<ExcThread(monitor, started 22383152850688)>']
[2025-06-05 04:05:36] 2025-06-05 02:03:08,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:05:36] 2025-06-05 02:03:08,178 | INFO     | [monitor] control thread has ended
[2025-06-05 04:05:36] 2025-06-05 02:03:12,417 | INFO     | all workflow threads have been joined
[2025-06-05 04:05:36] 2025-06-05 02:03:12,418 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:05:36] 2025-06-05 02:03:12,418 | INFO     | traces error code: 0
[2025-06-05 04:05:36] 2025-06-05 02:03:12,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:05:36] 2025-06-05 02:03:12,557 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:05:36] 2025-06-05 02:03:12,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:05:36] 2025-06-05 02:03:12,565 [wrapper] pilotpid: 888129
[2025-06-05 04:05:36] 2025-06-05 02:03:12,569 [wrapper] Pilot exit status: 0
[2025-06-05 04:05:36] 2025-06-05 02:03:12,585 [wrapper] pandaids: 6677455254
[2025-06-05 04:05:36] 2025-06-05 02:03:12,735 [wrapper] cleanup supervisor_pilot 1400699 888130
[2025-06-05 04:05:36] 2025-06-05 02:03:12,739 [wrapper] Test setup, not cleaning
[2025-06-05 04:05:36] 2025-06-05 02:03:12,743 [wrapper] apfmon messages muted
[2025-06-05 04:05:36] 2025-06-05 02:03:12,748 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:05:36] 2025-06-05 02:03:12,754 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:05:36]  *** Error codes and diagnostics ***
[2025-06-05 04:05:36]     "exeErrorCode": 0,
[2025-06-05 04:05:36]     "exeErrorDiag": "",
[2025-06-05 04:05:36]     "pilotErrorCode": 0,
[2025-06-05 04:05:36]     "pilotErrorDiag": "",
[2025-06-05 04:05:36]  *** Listing of results directory ***
[2025-06-05 04:05:36] total 403628
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc    495897 Jun  3 05:33 pilot3.tar.gz
[2025-06-05 04:05:36] -rwx------ 1 boinc boinc     37140 Jun  3 05:39 runpilot2-wrapper.sh
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc      5111 Jun  3 05:39 queuedata.json
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:05:36] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:41 run_atlas
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:41 job.xml
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc      6685 Jun  5 01:41 init_data.xml
[2025-06-05 04:05:36] -rw-r--r-- 2 boinc boinc 218765935 Jun  5 01:41 EVNT.45006593._000743.pool.root.1
[2025-06-05 04:05:36] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:41 start_atlas.sh
[2025-06-05 04:05:36] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:41 shared
[2025-06-05 04:05:36] -rw-r--r-- 2 boinc boinc    508876 Jun  5 01:41 input.tar.gz
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:41 boinc_lockfile
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc      2523 Jun  5 01:41 pandaJob.out
[2025-06-05 04:05:36] -rw------- 1 boinc boinc    987117 Jun  5 01:41 agis_schedconf.cvmfs.json
[2025-06-05 04:05:36] -rw------- 1 boinc boinc   1598969 Jun  5 01:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:05:36] drwx------ 4 boinc boinc      4096 Jun  5 01:41 pilot3
[2025-06-05 04:05:36] -rw------- 1 boinc boinc 188567045 Jun  5 04:02 HITS.45006595._018566.pool.root.1
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc       528 Jun  5 04:02 boinc_task_state.xml
[2025-06-05 04:05:36] -rw------- 1 boinc boinc      1027 Jun  5 04:02 memory_monitor_summary.json
[2025-06-05 04:05:36] -rw------- 1 boinc boinc    281953 Jun  5 04:02 log.45006595._018566.job.log.tgz.1
[2025-06-05 04:05:36] -rw------- 1 boinc boinc        95 Jun  5 04:02 pilot_heartbeat.json
[2025-06-05 04:05:36] -rw------- 1 boinc boinc      7700 Jun  5 04:02 heartbeat.json
[2025-06-05 04:05:36] -rw------- 1 boinc boinc      4364 Jun  5 04:03 pilotlog.txt
[2025-06-05 04:05:36] -rw------- 1 boinc boinc    793328 Jun  5 04:03 log.45006595._018566.job.log.1
[2025-06-05 04:05:36] -rw------- 1 boinc boinc       357 Jun  5 04:03 output.list
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc       620 Jun  5 04:03 runtime_log
[2025-06-05 04:05:36] -rw------- 1 boinc boinc   1095680 Jun  5 04:03 result.tar.gz
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc      9025 Jun  5 04:03 runtime_log.err
[2025-06-05 04:05:36] -rw------- 1 boinc boinc       662 Jun  5 04:03 NdNKDmufXg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFHXKDm2xkwTn.diag
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc        26 Jun  5 04:05 wrapper_checkpoint.txt
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc      8192 Jun  5 04:05 boinc_mmap_file
[2025-06-05 04:05:36] -rw-r--r-- 1 boinc boinc     20941 Jun  5 04:05 stderr.txt
[2025-06-05 04:05:36] HITS file was successfully produced:
[2025-06-05 04:05:36] -rw------- 1 boinc boinc 188567045 Jun  5 04:02 shared/HITS.pool.root.1
[2025-06-05 04:05:36]  *** Contents of shared directory: ***
[2025-06-05 04:05:36] total 399384
[2025-06-05 04:05:36] -rw-r--r-- 2 boinc boinc 218765935 Jun  5 01:41 ATLAS.root_0
[2025-06-05 04:05:36] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:41 start_atlas.sh
[2025-06-05 04:05:36] -rw-r--r-- 2 boinc boinc    508876 Jun  5 01:41 input.tar.gz
[2025-06-05 04:05:36] -rw------- 1 boinc boinc 188567045 Jun  5 04:02 HITS.pool.root.1
[2025-06-05 04:05:36] -rw------- 1 boinc boinc   1095680 Jun  5 04:03 result.tar.gz
04:05:37 (884132): run_atlas exited; CPU time 32470.987463
04:05:37 (884132): called boinc_finish(0)

</stderr_txt>
]]>

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