Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:46:54 (716698): wrapper (7.7.26015): starting
23:46:54 (716698): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 23:46:54] Arguments: --nthreads 8
[2025-06-02 23:46:54] Threads: 8
[2025-06-02 23:46:54] Checking for CVMFS
[2025-06-02 23:46:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:46:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:46:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:46:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:46:54] 2.11.3.0 23619 400805 211916 146733 2 500 37021320 45568000 10336 130560 0 1934225938 99.750 1579972535 19142 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-06-02 23:46:54] CVMFS is ok
[2025-06-02 23:46:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 23:46:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 23:46:54] Further information can be found at the LHC@home message board.
[2025-06-02 23:46:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:46:54] Checking for apptainer binary...
[2025-06-02 23:46:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:46:54] Running /usr/bin/apptainer --version
[2025-06-02 23:46:54] apptainer version 1.3.3-1.el9
[2025-06-02 23:46:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 23:46:54] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0004.triumf.lcg
[2025-06-02 23:46:54] apptainer works
[2025-06-02 23:46:54] Set ATHENA_PROC_NUMBER=8
[2025-06-02 23:46:54] Set ATHENA_CORE_NUMBER=8
[2025-06-02 23:46:54] Starting ATLAS job with PandaID=6677471608
[2025-06-02 23:46:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 23:49:55]  *** The last 200 lines of the pilot log: ***
[2025-06-02 23:49:55] 2025-06-03 06:49:40,554 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:49:55] 2025-06-03 06:49:40,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | found no stored workdir sizes
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | wrong length of table data, x=[1748933245.0], y=[1018.0] (must be same and length>=4)
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | ..............................
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . Timing measurements:
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . get job = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . initial setup = 3 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . payload setup = 3 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . stage-in = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . payload execution = 15 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . stage-out = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . log creation = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | ..............................
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:49:55] 2025-06-03 06:49:40,557 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677471608/pilotlog.txt
[2025-06-02 23:49:55] 2025-06-03 06:49:40,567 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 23:49:55] - Log from pilotlog.txt -
[2025-06-02 23:49:55] 2025-06-03 06:49:40,554 | INFO     | extracted standard info from prmon json
[2025-06-02 23:49:55] 2025-06-03 06:49:40,554 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:49:55] 2025-06-03 06:49:40,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | found no stored workdir sizes
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | wrong length of table data, x=[1748933245.0], y=[1018.0] (must be same and length>=4)
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | ..............................
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . Timing measurements:
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . get job = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . initial setup = 3 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . payload setup = 3 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . stage-in = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . payload execution = 15 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . stage-out = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . log creation = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | ..............................
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:49:55] 2025-06-03 06:49:40,557 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677471608/pilotlog.txt
[2025-06-02 23:49:55] 2025-06-03 06:49:40,567 | WARNING  | 
[2025-06-02 23:49:55] [begin log extracts]
[2025-06-02 23:49:55] - Log from pilotlog.txt -
[2025-06-02 23:49:55] 2025-06-03 06:49:40,554 | INFO     | extracted standard info from prmon json
[2025-06-02 23:49:55] 2025-06-03 06:49:40,554 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:49:55] 2025-06-03 06:49:40,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | found no stored workdir sizes
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 23:49:55] 2025-06-03 06:49:40,555 | WARNING  | wrong length of table data, x=[1748933245.0], y=[1018.0] (must be same and length>=4)
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | ..............................
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . Timing measurements:
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . get job = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . initial setup = 3 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . payload setup = 3 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . stage-in = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . payload execution = 15 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . stage-out = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | . log creation = 0 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | ..............................
[2025-06-02 23:49:55] 2025-06-03 06:49:40,556 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:49:55] 2025-06-03 06:49:40,557 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677471608/pilotlog.txt
[2025-06-02 23:49:55] [end log extracts]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,568 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 23:49:55] 2025-06-03 06:49:40,569 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 23:49:55] 2025-06-03 06:49:40,643 | INFO     | 
[2025-06-02 23:49:55] 2025-06-03 06:49:40,643 | INFO     | job summary report
[2025-06-02 23:49:55] 2025-06-03 06:49:40,643 | INFO     | --------------------------------------------------
[2025-06-02 23:49:55] 2025-06-03 06:49:40,643 | INFO     | PanDA job id: 6677471608
[2025-06-02 23:49:55] 2025-06-03 06:49:40,643 | INFO     | task id: 45006595
[2025-06-02 23:49:55] 2025-06-03 06:49:40,643 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 23:47:32,444 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 23:49:55] 2025-06-03 06:49:40,643 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 23:49:55] 2025-06-03 06:49:40,643 | INFO     | pilot state: failed 
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | transexitcode: 65
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | exeerrorcode: 65
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | exitcode: 65
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | cpuconsumptiontime: 16 s
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | nevents: 0
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | neventsw: 0
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | pid: 726626
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | pgrp: 726626
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | corecount: 8
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | event service: False
[2025-06-02 23:49:55] 2025-06-03 06:49:40,644 | INFO     | sizes: {0: 2404901, 1: 2405156, 4: 2405362, 11: 2405390, 23: 2432736, 24: 2432736, 143: 2433006}
[2025-06-02 23:49:55] 2025-06-03 06:49:40,645 | INFO     | --------------------------------------------------
[2025-06-02 23:49:55] 2025-06-03 06:49:40,645 | INFO     | 
[2025-06-02 23:49:55] 2025-06-03 06:49:40,645 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 23:49:55] 2025-06-03 06:49:40,659 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,659 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,659 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,661 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 23:49:55] 2025-06-03 06:49:40,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,661 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 23:49:55] 2025-06-03 06:49:40,661 | INFO     | job 6677471608 has completed (purged errors)
[2025-06-02 23:49:55] 2025-06-03 06:49:40,661 | INFO     | overall cleanup function is called
[2025-06-02 23:49:55] 2025-06-03 06:49:41,667 | INFO     | --- collectZombieJob: --- 10, [726626]
[2025-06-02 23:49:55] 2025-06-03 06:49:41,668 | INFO     | zombie collector waiting for pid 726626
[2025-06-02 23:49:55] 2025-06-03 06:49:41,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 23:49:55] 2025-06-03 06:49:41,668 | INFO     | collected zombie processes
[2025-06-02 23:49:55] 2025-06-03 06:49:41,668 | INFO     | will attempt to kill all subprocesses of pid=726626
[2025-06-02 23:49:55] 2025-06-03 06:49:41,841 | INFO     | process IDs to be killed: [726626] (in reverse order)
[2025-06-02 23:49:55] 2025-06-03 06:49:41,894 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 23:49:55] 2025-06-03 06:49:41,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 23:49:55] 2025-06-03 06:49:41,901 | INFO     | did not find any defunct processes belonging to 726626
[2025-06-02 23:49:55] 2025-06-03 06:49:41,906 | INFO     | did not find any defunct processes belonging to 726626
[2025-06-02 23:49:55] 2025-06-03 06:49:41,907 | INFO     | ready for new job
[2025-06-02 23:49:55] 2025-06-03 06:49:41,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 23:49:55] 2025-06-03 06:49:41,908 | INFO     | **************************************
[2025-06-02 23:49:55] 2025-06-03 06:49:41,908 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 23:49:55] 2025-06-03 06:49:41,908 | INFO     | **************************************
[2025-06-02 23:49:55] 2025-06-03 06:49:41,908 | INFO     | 
[2025-06-02 23:49:55] 2025-06-03 06:49:41,922 | INFO     | architecture information:
[2025-06-02 23:49:55] 2025-06-03 06:49:41,923 | INFO     | executing command: cat /etc/os-release
[2025-06-02 23:49:55] 2025-06-03 06:49:41,932 | INFO     | cat /etc/os-release:
[2025-06-02 23:49:55] NAME="CentOS Linux"
[2025-06-02 23:49:55] VERSION="7 (Core)"
[2025-06-02 23:49:55] ID="centos"
[2025-06-02 23:49:55] ID_LIKE="rhel fedora"
[2025-06-02 23:49:55] VERSION_ID="7"
[2025-06-02 23:49:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 23:49:55] ANSI_COLOR="0;31"
[2025-06-02 23:49:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 23:49:55] HOME_URL="https://www.centos.org/"
[2025-06-02 23:49:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 23:49:55] 
[2025-06-02 23:49:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 23:49:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 23:49:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 23:49:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 23:49:55] 
[2025-06-02 23:49:55] 2025-06-03 06:49:41,932 | INFO     | **************************************
[2025-06-02 23:49:55] 2025-06-03 06:49:42,435 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 23:49:55] 2025-06-03 06:49:42,448 | INFO     | sufficient remaining disk space (1302503358464 B)
[2025-06-02 23:49:55] 2025-06-03 06:49:42,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 23:49:55] 2025-06-03 06:49:42,448 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 23:49:55] 2025-06-03 06:49:42,448 | INFO     | update_server=False
[2025-06-02 23:49:55] 2025-06-03 06:49:42,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 23:49:55] 2025-06-03 06:49:42,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:49:55] 2025-06-03 06:49:42,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:49:55] 2025-06-03 06:49:42,449 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 23:49:55] 2025-06-03 06:49:42,450 | INFO     | aborting loop
[2025-06-02 23:49:55] 2025-06-03 06:49:42,450 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 23:49:55] 2025-06-03 06:49:42,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 23:49:55] 2025-06-03 06:49:42,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 23:49:55] 2025-06-03 06:49:42,620 | INFO     | all payload control threads have been joined
[2025-06-02 23:49:55] 2025-06-03 06:49:43,147 | INFO     | all data control threads have been joined
[2025-06-02 23:49:55] 2025-06-03 06:49:43,454 | INFO     | [job] retrieve thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:43,455 | INFO     | [job] queue monitor thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:43,455 | INFO     | [job] job monitor thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:43,477 | INFO     | all job control threads have been joined
[2025-06-02 23:49:55] 2025-06-03 06:49:43,625 | INFO     | [payload] control thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:43,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 23:49:55] 2025-06-03 06:49:43,928 | INFO     | [job] validate thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:43,936 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:44,085 | INFO     | [data] copytool_in thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:44,107 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:44,150 | INFO     | [data] control thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:44,238 | INFO     | [payload] validate_post thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:44,286 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:44,483 | INFO     | [job] control thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:44,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 23:49:55] 2025-06-03 06:49:44,779 | INFO     | [payload] failed_post thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:44,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:45,841 | INFO     | [data] copytool_out thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:48,604 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 23:49:55] 2025-06-03 06:49:49,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139759676135232)>', '<ExcThread(monitor, started 139759124977408)>']
[2025-06-02 23:49:55] 2025-06-03 06:49:50,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 23:49:55] 2025-06-03 06:49:50,482 | INFO     | [monitor] control thread has ended
[2025-06-02 23:49:55] 2025-06-03 06:49:54,825 | INFO     | all workflow threads have been joined
[2025-06-02 23:49:55] 2025-06-03 06:49:54,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 23:49:55] 2025-06-03 06:49:54,826 | INFO     | traces error code: 0
[2025-06-02 23:49:55] 2025-06-03 06:49:54,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 23:49:55] 2025-06-03 06:49:54,947 [wrapper] ==== pilot stdout END ====
[2025-06-02 23:49:55] 2025-06-03 06:49:54,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 23:49:55] 2025-06-03 06:49:54,951 [wrapper] pilotpid: 720294
[2025-06-02 23:49:55] 2025-06-03 06:49:54,953 [wrapper] Pilot exit status: 0
[2025-06-02 23:49:55] 2025-06-03 06:49:54,961 [wrapper] pandaids: 6677471608
[2025-06-02 23:49:55] 2025-06-03 06:49:54,993 [wrapper] cleanup supervisor_pilot  720300 720295
[2025-06-02 23:49:55] 2025-06-03 06:49:54,995 [wrapper] Test setup, not cleaning
[2025-06-02 23:49:55] 2025-06-03 06:49:54,997 [wrapper] apfmon messages muted
[2025-06-02 23:49:55] 2025-06-03 06:49:54,999 [wrapper] ==== wrapper stdout END ====
[2025-06-02 23:49:55] 2025-06-03 06:49:55,000 [wrapper] ==== wrapper stderr END ====
[2025-06-02 23:49:55]  *** Error codes and diagnostics ***
[2025-06-02 23:49:55]     "exeErrorCode": 65,
[2025-06-02 23:49:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 23:49:55]     "pilotErrorCode": 1305,
[2025-06-02 23:49:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 23:49:55]  *** Listing of results directory ***
[2025-06-02 23:49:55] total 213284
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:14 pilot3.tar.gz
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:37 queuedata.json
[2025-06-02 23:49:55] -rwx------. 1 boinc boinc     37140 Jun  2 22:37 runpilot2-wrapper.sh
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc       100 Jun  2 23:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 23:49:55] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 23:46 run_atlas
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc       105 Jun  2 23:46 job.xml
[2025-06-02 23:49:55] -rw-r--r--. 2 boinc boinc 214378628 Jun  2 23:46 EVNT.45006593._000843.pool.root.1
[2025-06-02 23:49:55] -rw-r--r--. 2 boinc boinc    508882 Jun  2 23:46 input.tar.gz
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc      6452 Jun  2 23:46 init_data.xml
[2025-06-02 23:49:55] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:46 start_atlas.sh
[2025-06-02 23:49:55] drwxrwx--x. 2 boinc boinc      4096 Jun  2 23:46 shared
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc         0 Jun  2 23:46 boinc_lockfile
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc      2523 Jun  2 23:46 pandaJob.out
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc    986901 Jun  2 23:47 agis_schedconf.cvmfs.json
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc   1603667 Jun  2 23:47 agis_ddmendpoints.agis.ALL.json
[2025-06-02 23:49:55] drwx------. 4 boinc boinc      4096 Jun  2 23:47 pilot3
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc       984 Jun  2 23:47 memory_monitor_summary.json
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc     20548 Jun  2 23:47 log.45006595._021063.job.log.tgz.1
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc       522 Jun  2 23:47 boinc_task_state.xml
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc        95 Jun  2 23:49 pilot_heartbeat.json
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc      8307 Jun  2 23:49 heartbeat.json
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc        22 Jun  2 23:49 wrapper_checkpoint.txt
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc      8192 Jun  2 23:49 boinc_mmap_file
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc      4475 Jun  2 23:49 pilotlog.txt
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc     72691 Jun  2 23:49 log.45006595._021063.job.log.1
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc       188 Jun  2 23:49 output.list
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:49 runtime_log
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc    112640 Jun  2 23:49 result.tar.gz
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc      8647 Jun  2 23:49 runtime_log.err
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc       644 Jun  2 23:49 OLnNDmRWZg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbUXKDmV4rfpm.diag
[2025-06-02 23:49:55] -rw-r--r--. 1 boinc boinc     21632 Jun  2 23:49 stderr.txt
[2025-06-02 23:49:55] No HITS result produced
[2025-06-02 23:49:55]  *** Contents of shared directory: ***
[2025-06-02 23:49:55] total 209988
[2025-06-02 23:49:55] -rw-r--r--. 2 boinc boinc 214378628 Jun  2 23:46 ATLAS.root_0
[2025-06-02 23:49:55] -rw-r--r--. 2 boinc boinc    508882 Jun  2 23:46 input.tar.gz
[2025-06-02 23:49:55] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:46 start_atlas.sh
[2025-06-02 23:49:55] -rw-------. 1 boinc boinc    112640 Jun  2 23:49 result.tar.gz
23:49:56 (716698): run_atlas exited; CPU time 20.488799
23:49:56 (716698): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN