Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:18:18 (269512): wrapper (7.7.26015): starting
20:18:18 (269512): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 20:18:18] Arguments: --nthreads 4
[2025-06-04 20:18:18] Threads: 4
[2025-06-04 20:18:18] Checking for CVMFS
[2025-06-04 20:18:18] No cvmfs_config command found, will try listing directly
[2025-06-04 20:18:18] CVMFS is ok
[2025-06-04 20:18:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:18:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:18:18] Further information can be found at the LHC@home message board.
[2025-06-04 20:18:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:18:18] Checking for apptainer binary...
[2025-06-04 20:18:18] which: no apptainer in ((null))
[2025-06-04 20:18:18] apptainer is not installed, using version from CVMFS
[2025-06-04 20:18:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:18:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-04 20:18:18] apptainer works
[2025-06-04 20:18:18] Set ATHENA_PROC_NUMBER=4
[2025-06-04 20:18:18] Set ATHENA_CORE_NUMBER=4
[2025-06-04 20:18:18] Starting ATLAS job with PandaID=6677454328
[2025-06-04 20:18:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:36:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:36:56] 2025-06-04 20:36:25,748 | WARNING  | process 283223 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 22:36:56] 2025-06-04 20:36:25,748 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6677454328/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:36:56] 2025-06-04 20:36:26,812 | INFO     | PID=273514 has CPU usage=19.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 22:36:56] 2025-06-04 20:36:26,812 | INFO     | .. there are 13 such processes running
[2025-06-04 22:36:56] 2025-06-04 20:36:27,075 | INFO     | number of running child processes to parent process 283223: 1
[2025-06-04 22:36:56] 2025-06-04 20:36:27,075 | INFO     | maximum number of monitored processes: 6
[2025-06-04 22:36:56] 2025-06-04 20:36:29,578 | INFO     | monitor loop #574: job 0:6677454328 is in state 'finished'
[2025-06-04 22:36:56] 2025-06-04 20:36:29,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:36:56] 2025-06-04 20:36:31,268 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 22:36:56] 2025-06-04 20:36:31,270 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6677454328/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:36:56] 2025-06-04 20:36:31,272 | INFO     | extracted standard info from prmon json
[2025-06-04 22:36:56] 2025-06-04 20:36:31,272 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:36:56] 2025-06-04 20:36:31,272 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:36:56] 2025-06-04 20:36:31,273 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:36:56] 2025-06-04 20:36:31,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:36:56] 2025-06-04 20:36:31,282 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:36:56] 2025-06-04 20:36:31,283 | INFO     | sum of square deviations: 762879420.0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,284 | INFO     | sum of deviations: 3162112876.0000005
[2025-06-04 22:36:56] 2025-06-04 20:36:31,284 | INFO     | mean x: 1749065236.0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,284 | INFO     | mean y: 2334284.2
[2025-06-04 22:36:56] 2025-06-04 20:36:31,284 | INFO     | -- intersect: -7247489945.846184
[2025-06-04 22:36:56] 2025-06-04 20:36:31,284 | INFO     | intersect: -7247489945.846184
[2025-06-04 22:36:56] 2025-06-04 20:36:31,284 | INFO     | chi2: 1.45397015992699
[2025-06-04 22:36:56] 2025-06-04 20:36:31,285 | INFO     | sum of square deviations: 681212772.5
[2025-06-04 22:36:56] 2025-06-04 20:36:31,285 | INFO     | sum of deviations: 3312634737.499999
[2025-06-04 22:36:56] 2025-06-04 20:36:31,285 | INFO     | mean x: 1749065083.5
[2025-06-04 22:36:56] 2025-06-04 20:36:31,286 | INFO     | mean y: 2334565.4076923076
[2025-06-04 22:36:56] 2025-06-04 20:36:31,286 | INFO     | -- intersect: -8503104539.157008
[2025-06-04 22:36:56] 2025-06-04 20:36:31,286 | INFO     | intersect: -8503104539.157008
[2025-06-04 22:36:56] 2025-06-04 20:36:31,286 | INFO     | chi2: 1.4556035947513708
[2025-06-04 22:36:56] 2025-06-04 20:36:31,286 | INFO     | current chi2=1.4556035947513708 (change=-0.11234307755413227 %)
[2025-06-04 22:36:56] 2025-06-04 20:36:31,286 | INFO     | right removable region: 129
[2025-06-04 22:36:56] 2025-06-04 20:36:31,286 | INFO     | sum of square deviations: 681212772.5
[2025-06-04 22:36:56] 2025-06-04 20:36:31,287 | INFO     | sum of deviations: -14566639112.5
[2025-06-04 22:36:56] 2025-06-04 20:36:31,287 | INFO     | mean x: 1749065388.5
[2025-06-04 22:36:56] 2025-06-04 20:36:31,287 | INFO     | mean y: 2366749.5153846154
[2025-06-04 22:36:56] 2025-06-04 20:36:31,287 | INFO     | -- intersect: 37403315949.19309
[2025-06-04 22:36:56] 2025-06-04 20:36:31,287 | INFO     | intersect: 37403315949.19309
[2025-06-04 22:36:56] 2025-06-04 20:36:31,288 | INFO     | chi2: 0.02925333122425088
[2025-06-04 22:36:56] 2025-06-04 20:36:31,288 | INFO     | current chi2=0.02925333122425088 (change=97.98803771696939 %)
[2025-06-04 22:36:56] 2025-06-04 20:36:31,288 | INFO     | sum of square deviations: 605592750.0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,289 | INFO     | sum of deviations: -13230950386.000002
[2025-06-04 22:36:56] 2025-06-04 20:36:31,289 | INFO     | mean x: 1749065541.0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,289 | INFO     | mean y: 2364015.04
[2025-06-04 22:36:56] 2025-06-04 20:36:31,289 | INFO     | -- intersect: 38215832381.08839
[2025-06-04 22:36:56] 2025-06-04 20:36:31,289 | INFO     | intersect: 38215832381.08839
[2025-06-04 22:36:56] 2025-06-04 20:36:31,289 | INFO     | chi2: 0.026347789262017963
[2025-06-04 22:36:56] 2025-06-04 20:36:31,289 | INFO     | current chi2=0.026347789262017963 (change=9.932345618895653 %)
[2025-06-04 22:36:56] 2025-06-04 20:36:31,289 | INFO     | left removable region: 20
[2025-06-04 22:36:56] 2025-06-04 20:36:31,289 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,290 | INFO     | sum of deviations: -7851380516.0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,290 | INFO     | mean x: 1749065663.0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,290 | INFO     | mean y: 2354408.256880734
[2025-06-04 22:36:56] 2025-06-04 20:36:31,290 | INFO     | -- intersect: 34202722262.561153
[2025-06-04 22:36:56] 2025-06-04 20:36:31,290 | INFO     | intersect: 34202722262.561153
[2025-06-04 22:36:56] 2025-06-04 20:36:31,290 | INFO     | chi2: 0.018652252725576364
[2025-06-04 22:36:56] 2025-06-04 20:36:31,291 | INFO     | -- intersect: 34202722262.561153
[2025-06-04 22:36:56] 2025-06-04 20:36:31,291 | INFO     | current memory leak: -19.55 B/s (using 109 data points, chi2=0.02)
[2025-06-04 22:36:56] 2025-06-04 20:36:31,291 | INFO     | ..............................
[2025-06-04 22:36:56] 2025-06-04 20:36:31,291 | INFO     | . Timing measurements:
[2025-06-04 22:36:56] 2025-06-04 20:36:31,291 | INFO     | . get job = 0 s
[2025-06-04 22:36:56] 2025-06-04 20:36:31,292 | INFO     | . initial setup = 1 s
[2025-06-04 22:36:56] 2025-06-04 20:36:31,292 | INFO     | . payload setup = 10 s
[2025-06-04 22:36:56] 2025-06-04 20:36:31,292 | INFO     | . stage-in = 0 s
[2025-06-04 22:36:56] 2025-06-04 20:36:31,292 | INFO     | . payload execution = 8236 s
[2025-06-04 22:36:56] 2025-06-04 20:36:31,292 | INFO     | . stage-out = 0 s
[2025-06-04 22:36:56] 2025-06-04 20:36:31,292 | INFO     | . log creation = 0 s
[2025-06-04 22:36:56] 2025-06-04 20:36:31,292 | INFO     | ..............................
[2025-06-04 22:36:56] 2025-06-04 20:36:31,384 | INFO     | 
[2025-06-04 22:36:56] 2025-06-04 20:36:31,384 | INFO     | job summary report
[2025-06-04 22:36:56] 2025-06-04 20:36:31,384 | INFO     | --------------------------------------------------
[2025-06-04 22:36:56] 2025-06-04 20:36:31,384 | INFO     | PanDA job id: 6677454328
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | task id: 45006595
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | errors: (none)
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | pilot state: finished 
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | transexitcode: 0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | exeerrorcode: 0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | exeerrordiag: 
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | exitcode: 0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | exitmsg: OK
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | cpuconsumptiontime: 31053 s
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | nevents: 400
[2025-06-04 22:36:56] 2025-06-04 20:36:31,385 | INFO     | neventsw: 0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,386 | INFO     | pid: 283223
[2025-06-04 22:36:56] 2025-06-04 20:36:31,386 | INFO     | pgrp: 283223
[2025-06-04 22:36:56] 2025-06-04 20:36:31,386 | INFO     | corecount: 4
[2025-06-04 22:36:56] 2025-06-04 20:36:31,386 | INFO     | event service: False
[2025-06-04 22:36:56] 2025-06-04 20:36:31,386 | INFO     | sizes: {0: 2397352, 7: 2397558, 11: 2397586, 8251: 2425683, 8253: 2434648, 8254: 2434704, 8261: 2435002}
[2025-06-04 22:36:56] 2025-06-04 20:36:31,386 | INFO     | --------------------------------------------------
[2025-06-04 22:36:56] 2025-06-04 20:36:31,386 | INFO     | 
[2025-06-04 22:36:56] 2025-06-04 20:36:31,386 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-06-04 22:36:56] 2025-06-04 20:36:31,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:36:56] 2025-06-04 20:36:31,417 | INFO     | job 6677454328 has completed (purged errors)
[2025-06-04 22:36:56] 2025-06-04 20:36:31,418 | INFO     | overall cleanup function is called
[2025-06-04 22:36:56] 2025-06-04 20:36:32,429 | INFO     | --- collectZombieJob: --- 10, [283223]
[2025-06-04 22:36:56] 2025-06-04 20:36:32,429 | INFO     | zombie collector waiting for pid 283223
[2025-06-04 22:36:56] 2025-06-04 20:36:32,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:36:56] 2025-06-04 20:36:32,429 | INFO     | collected zombie processes
[2025-06-04 22:36:56] 2025-06-04 20:36:32,429 | INFO     | will attempt to kill all subprocesses of pid=283223
[2025-06-04 22:36:56] 2025-06-04 20:36:33,156 | INFO     | process IDs to be killed: [283223] (in reverse order)
[2025-06-04 22:36:56] 2025-06-04 20:36:33,398 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:36:56] 2025-06-04 20:36:33,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:36:56] 2025-06-04 20:36:33,428 | INFO     | did not find any defunct processes belonging to 283223
[2025-06-04 22:36:56] 2025-06-04 20:36:33,454 | INFO     | did not find any defunct processes belonging to 283223
[2025-06-04 22:36:56] 2025-06-04 20:36:33,455 | INFO     | ready for new job
[2025-06-04 22:36:56] 2025-06-04 20:36:33,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:36:56] 2025-06-04 20:36:33,457 | INFO     | **************************************
[2025-06-04 22:36:56] 2025-06-04 20:36:33,457 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:36:56] 2025-06-04 20:36:33,457 | INFO     | **************************************
[2025-06-04 22:36:56] 2025-06-04 20:36:33,457 | INFO     | 
[2025-06-04 22:36:56] 2025-06-04 20:36:33,465 | INFO     | architecture information:
[2025-06-04 22:36:56] 2025-06-04 20:36:33,466 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:36:56] 2025-06-04 20:36:33,489 | INFO     | cat /etc/os-release:
[2025-06-04 22:36:56] NAME="CentOS Linux"
[2025-06-04 22:36:56] VERSION="7 (Core)"
[2025-06-04 22:36:56] ID="centos"
[2025-06-04 22:36:56] ID_LIKE="rhel fedora"
[2025-06-04 22:36:56] VERSION_ID="7"
[2025-06-04 22:36:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:36:56] ANSI_COLOR="0;31"
[2025-06-04 22:36:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:36:56] HOME_URL="https://www.centos.org/"
[2025-06-04 22:36:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:36:56] 
[2025-06-04 22:36:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:36:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:36:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:36:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:36:56] 
[2025-06-04 22:36:56] 2025-06-04 20:36:33,489 | INFO     | **************************************
[2025-06-04 22:36:56] 2025-06-04 20:36:33,993 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-06-04 22:36:56] 2025-06-04 20:36:34,015 | INFO     | sufficient remaining disk space (3224913313792 B)
[2025-06-04 22:36:56] 2025-06-04 20:36:34,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:36:56] 2025-06-04 20:36:34,015 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:36:56] 2025-06-04 20:36:34,016 | INFO     | update_server=False
[2025-06-04 22:36:56] 2025-06-04 20:36:34,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:36:56] 2025-06-04 20:36:34,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:36:56] 2025-06-04 20:36:34,016 | INFO     | aborting loop
[2025-06-04 22:36:56] 2025-06-04 20:36:34,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:36:56] 2025-06-04 20:36:34,195 | INFO     | all payload control threads have been joined
[2025-06-04 22:36:56] 2025-06-04 20:36:34,792 | INFO     | all data control threads have been joined
[2025-06-04 22:36:56] 2025-06-04 20:36:34,832 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:36:56] 2025-06-04 20:36:34,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:36:56] 2025-06-04 20:36:34,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:36:56] 2025-06-04 20:36:35,021 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:35,022 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:35,155 | INFO     | [job] validate thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:35,200 | INFO     | [payload] control thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:35,386 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:35,406 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:35,460 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:35,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:36:56] 2025-06-04 20:36:35,608 | INFO     | all job control threads have been joined
[2025-06-04 22:36:56] 2025-06-04 20:36:35,798 | INFO     | [data] control thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:36,021 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:36,035 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:36,059 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:36,059 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:36,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:36:56] 2025-06-04 20:36:36,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:36,613 | INFO     | [job] control thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:37,401 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:39,488 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:36:56] 2025-06-04 20:36:41,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22705759786816)>', '<ExcThread(monitor, started 22705514432256)>']
[2025-06-04 22:36:56] 2025-06-04 20:36:41,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:36:56] 2025-06-04 20:36:41,868 | INFO     | [monitor] control thread has ended
[2025-06-04 22:36:56] 2025-06-04 20:36:46,554 | INFO     | all workflow threads have been joined
[2025-06-04 22:36:56] 2025-06-04 20:36:46,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:36:56] 2025-06-04 20:36:46,554 | INFO     | traces error code: 0
[2025-06-04 22:36:56] 2025-06-04 20:36:46,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:36:56] 2025-06-04 20:36:46,690 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:36:56] 2025-06-04 20:36:46,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:36:56] 2025-06-04 20:36:46,697 [wrapper] pilotpid: 273514
[2025-06-04 22:36:56] 2025-06-04 20:36:46,701 [wrapper] Pilot exit status: 0
[2025-06-04 22:36:56] 2025-06-04 20:36:46,717 [wrapper] pandaids: 6677454328
[2025-06-04 22:36:56] 2025-06-04 20:36:46,878 [wrapper] cleanup supervisor_pilot  762740 273515
[2025-06-04 22:36:56] 2025-06-04 20:36:46,882 [wrapper] Test setup, not cleaning
[2025-06-04 22:36:56] 2025-06-04 20:36:46,886 [wrapper] apfmon messages muted
[2025-06-04 22:36:56] 2025-06-04 20:36:46,889 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:36:56] 2025-06-04 20:36:46,893 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:36:56]  *** Error codes and diagnostics ***
[2025-06-04 22:36:56]     "exeErrorCode": 0,
[2025-06-04 22:36:56]     "exeErrorDiag": "",
[2025-06-04 22:36:56]     "pilotErrorCode": 0,
[2025-06-04 22:36:56]     "pilotErrorDiag": "",
[2025-06-04 22:36:56]  *** Listing of results directory ***
[2025-06-04 22:36:56] total 395744
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc    495897 Jun  3 04:50 pilot3.tar.gz
[2025-06-04 22:36:56] -rwx------ 1 boinc boinc     37140 Jun  3 04:55 runpilot2-wrapper.sh
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc      5111 Jun  3 04:55 queuedata.json
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc       100 Jun  4 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:36:56] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 20:18 run_atlas
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc       105 Jun  4 20:18 job.xml
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc      6687 Jun  4 20:18 init_data.xml
[2025-06-04 22:36:56] -rw-r--r-- 2 boinc boinc 217280918 Jun  4 20:18 EVNT.45006593._000712.pool.root.1
[2025-06-04 22:36:56] -rw-r--r-- 2 boinc boinc     15093 Jun  4 20:18 start_atlas.sh
[2025-06-04 22:36:56] drwxrwx--x 2 boinc boinc      4096 Jun  4 20:18 shared
[2025-06-04 22:36:56] -rw-r--r-- 2 boinc boinc    508876 Jun  4 20:18 input.tar.gz
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc         0 Jun  4 20:18 boinc_lockfile
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc      2524 Jun  4 20:18 pandaJob.out
[2025-06-04 22:36:56] -rw------- 1 boinc boinc    990984 Jun  4 20:18 agis_schedconf.cvmfs.json
[2025-06-04 22:36:56] -rw------- 1 boinc boinc   1598969 Jun  4 20:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:36:56] drwx------ 4 boinc boinc      4096 Jun  4 20:18 pilot3
[2025-06-04 22:36:56] -rw------- 1 boinc boinc 182006292 Jun  4 22:35 HITS.45006595._017791.pool.root.1
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc       529 Jun  4 22:35 boinc_task_state.xml
[2025-06-04 22:36:56] -rw------- 1 boinc boinc        95 Jun  4 22:36 pilot_heartbeat.json
[2025-06-04 22:36:56] -rw------- 1 boinc boinc      1029 Jun  4 22:36 memory_monitor_summary.json
[2025-06-04 22:36:56] -rw------- 1 boinc boinc    277658 Jun  4 22:36 log.45006595._017791.job.log.tgz.1
[2025-06-04 22:36:56] -rw------- 1 boinc boinc      7706 Jun  4 22:36 heartbeat.json
[2025-06-04 22:36:56] -rw------- 1 boinc boinc      4365 Jun  4 22:36 pilotlog.txt
[2025-06-04 22:36:56] -rw------- 1 boinc boinc    779508 Jun  4 22:36 log.45006595._017791.job.log.1
[2025-06-04 22:36:56] -rw------- 1 boinc boinc       357 Jun  4 22:36 output.list
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc       620 Jun  4 22:36 runtime_log
[2025-06-04 22:36:56] -rw------- 1 boinc boinc   1075200 Jun  4 22:36 result.tar.gz
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc      9040 Jun  4 22:36 runtime_log.err
[2025-06-04 22:36:56] -rw------- 1 boinc boinc       663 Jun  4 22:36 97LMDm7yWg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIghKDmUdbYsm.diag
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc        27 Jun  4 22:36 wrapper_checkpoint.txt
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc      8192 Jun  4 22:36 boinc_mmap_file
[2025-06-04 22:36:56] -rw-r--r-- 1 boinc boinc     20934 Jun  4 22:36 stderr.txt
[2025-06-04 22:36:56] HITS file was successfully produced:
[2025-06-04 22:36:56] -rw------- 1 boinc boinc 182006292 Jun  4 22:35 shared/HITS.pool.root.1
[2025-06-04 22:36:56]  *** Contents of shared directory: ***
[2025-06-04 22:36:56] total 391512
[2025-06-04 22:36:56] -rw-r--r-- 2 boinc boinc 217280918 Jun  4 20:18 ATLAS.root_0
[2025-06-04 22:36:56] -rw-r--r-- 2 boinc boinc     15093 Jun  4 20:18 start_atlas.sh
[2025-06-04 22:36:56] -rw-r--r-- 2 boinc boinc    508876 Jun  4 20:18 input.tar.gz
[2025-06-04 22:36:56] -rw------- 1 boinc boinc 182006292 Jun  4 22:35 HITS.pool.root.1
[2025-06-04 22:36:56] -rw------- 1 boinc boinc   1075200 Jun  4 22:36 result.tar.gz
22:36:58 (269512): run_atlas exited; CPU time 31513.579133
22:36:58 (269512): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN