Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:00 (16229): wrapper (7.7.26015): starting
17:31:00 (16229): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:31:00] Arguments: --nthreads 8
[2025-06-03 17:31:00] Threads: 8
[2025-06-03 17:31:00] Checking for CVMFS
[2025-06-03 17:31:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:31:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:31:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:31:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:31:01] 2.11.2.0 6428 31939 95720 146746 0 214 17149722 25165825 3147 130560 0 17262993 99.844 18703917 2102 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:31:01] CVMFS is ok
[2025-06-03 17:31:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:31:02] Checking for apptainer binary...
[2025-06-03 17:31:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:31:02] Running /usr/bin/apptainer --version
[2025-06-03 17:31:02] apptainer version 1.3.2-1.el7
[2025-06-03 17:31:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:31:04] cg-vwn335.simple-grid.lan
[2025-06-03 17:31:04] apptainer works
[2025-06-03 17:31:04] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:31:04] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:31:04] Starting ATLAS job with PandaID=6677455308
[2025-06-03 17:31:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:36:18]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:36:18] 2025-06-03 19:21:23,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:36:18] 2025-06-03 19:21:23,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:36:18] 2025-06-03 19:21:23,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:36:18] 2025-06-03 19:21:23,336 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:36:18] 2025-06-03 19:21:23,337 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,339 | INFO     | sum of deviations: 28516602232.500015
[2025-06-03 21:36:18] 2025-06-03 19:21:23,339 | INFO     | mean x: 1748971701.5
[2025-06-03 21:36:18] 2025-06-03 19:21:23,339 | INFO     | mean y: 2446745.2772727273
[2025-06-03 21:36:18] 2025-06-03 19:21:23,339 | INFO     | -- intersect: -15103330186.66289
[2025-06-03 21:36:18] 2025-06-03 19:21:23,339 | INFO     | intersect: -15103330186.66289
[2025-06-03 21:36:18] 2025-06-03 19:21:23,340 | INFO     | chi2: 8.298332502181983
[2025-06-03 21:36:18] 2025-06-03 19:21:23,340 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,342 | INFO     | sum of deviations: 57386473643.00001
[2025-06-03 21:36:18] 2025-06-03 19:21:23,344 | INFO     | mean x: 1748971549.0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,345 | INFO     | mean y: 2466474.6744186045
[2025-06-03 21:36:18] 2025-06-03 19:21:23,345 | INFO     | -- intersect: -32566792302.34832
[2025-06-03 21:36:18] 2025-06-03 19:21:23,345 | INFO     | intersect: -32566792302.34832
[2025-06-03 21:36:18] 2025-06-03 19:21:23,345 | INFO     | chi2: 6.829262197035436
[2025-06-03 21:36:18] 2025-06-03 19:21:23,345 | INFO     | current chi2=6.829262197035436 (change=17.703198862666284 %)
[2025-06-03 21:36:18] 2025-06-03 19:21:23,346 | INFO     | right removable region: 214
[2025-06-03 21:36:18] 2025-06-03 19:21:23,346 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,348 | INFO     | sum of deviations: -49398588303.0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,348 | INFO     | mean x: 1748971854.0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,348 | INFO     | mean y: 2500709.153488372
[2025-06-03 21:36:18] 2025-06-03 19:21:23,348 | INFO     | -- intersect: 28038300508.208603
[2025-06-03 21:36:18] 2025-06-03 19:21:23,348 | INFO     | intersect: 28038300508.208603
[2025-06-03 21:36:18] 2025-06-03 19:21:23,349 | INFO     | chi2: 3.2297249094879223
[2025-06-03 21:36:18] 2025-06-03 19:21:23,349 | INFO     | current chi2=3.2297249094879223 (change=61.07983250082242 %)
[2025-06-03 21:36:18] 2025-06-03 19:21:23,349 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 21:36:18] 2025-06-03 19:21:23,351 | INFO     | sum of deviations: -85418249949.5
[2025-06-03 21:36:18] 2025-06-03 19:21:23,351 | INFO     | mean x: 1748972006.5
[2025-06-03 21:36:18] 2025-06-03 19:21:23,351 | INFO     | mean y: 2526680.8523809523
[2025-06-03 21:36:18] 2025-06-03 19:21:23,351 | INFO     | -- intersect: 52026925173.01271
[2025-06-03 21:36:18] 2025-06-03 19:21:23,351 | INFO     | intersect: 52026925173.01271
[2025-06-03 21:36:18] 2025-06-03 19:21:23,352 | INFO     | chi2: 1.8765664295473399
[2025-06-03 21:36:18] 2025-06-03 19:21:23,352 | INFO     | current chi2=1.8765664295473399 (change=41.89701964911705 %)
[2025-06-03 21:36:18] 2025-06-03 19:21:23,352 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,354 | INFO     | sum of deviations: -83908941010.00002
[2025-06-03 21:36:18] 2025-06-03 19:21:23,354 | INFO     | mean x: 1748972159.0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,354 | INFO     | mean y: 2525487.1951219514
[2025-06-03 21:36:18] 2025-06-03 19:21:23,355 | INFO     | -- intersect: 54939085739.71295
[2025-06-03 21:36:18] 2025-06-03 19:21:23,355 | INFO     | intersect: 54939085739.71295
[2025-06-03 21:36:18] 2025-06-03 19:21:23,355 | INFO     | chi2: 1.8561021486162004
[2025-06-03 21:36:18] 2025-06-03 19:21:23,360 | INFO     | current chi2=1.8561021486162004 (change=1.0905172664777893 %)
[2025-06-03 21:36:18] 2025-06-03 19:21:23,360 | INFO     | left removable region: 30
[2025-06-03 21:36:18] 2025-06-03 19:21:23,360 | INFO     | sum of square deviations: 1931608310.0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,361 | INFO     | sum of deviations: -36680312996.49999
[2025-06-03 21:36:18] 2025-06-03 19:21:23,362 | INFO     | mean x: 1748972433.5
[2025-06-03 21:36:18] 2025-06-03 19:21:23,362 | INFO     | mean y: 2533231.842391304
[2025-06-03 21:36:18] 2025-06-03 19:21:23,362 | INFO     | -- intersect: 33214678753.741844
[2025-06-03 21:36:18] 2025-06-03 19:21:23,362 | INFO     | intersect: 33214678753.741844
[2025-06-03 21:36:18] 2025-06-03 19:21:23,362 | INFO     | chi2: 0.18479937719401016
[2025-06-03 21:36:18] 2025-06-03 19:21:23,362 | INFO     | -- intersect: 33214678753.741844
[2025-06-03 21:36:18] 2025-06-03 19:21:23,363 | INFO     | current memory leak: -18.99 B/s (using 184 data points, chi2=0.18)
[2025-06-03 21:36:18] 2025-06-03 19:21:23,363 | INFO     | ..............................
[2025-06-03 21:36:18] 2025-06-03 19:21:23,364 | INFO     | . Timing measurements:
[2025-06-03 21:36:18] 2025-06-03 19:21:23,364 | INFO     | . get job = 0 s
[2025-06-03 21:36:18] 2025-06-03 19:21:23,364 | INFO     | . initial setup = 2 s
[2025-06-03 21:36:18] 2025-06-03 19:21:23,364 | INFO     | . payload setup = 135 s
[2025-06-03 21:36:18] 2025-06-03 19:21:23,364 | INFO     | . stage-in = 0 s
[2025-06-03 21:36:18] 2025-06-03 19:21:23,364 | INFO     | . payload execution = 13516 s
[2025-06-03 21:36:18] 2025-06-03 19:21:23,364 | INFO     | . stage-out = 4 s
[2025-06-03 21:36:18] 2025-06-03 19:21:23,364 | INFO     | . log creation = 1 s
[2025-06-03 21:36:18] 2025-06-03 19:21:23,364 | INFO     | ..............................
[2025-06-03 21:36:18] 2025-06-03 19:21:23,535 | INFO     | 
[2025-06-03 21:36:18] 2025-06-03 19:21:23,536 | INFO     | job summary report
[2025-06-03 21:36:18] 2025-06-03 19:21:23,536 | INFO     | --------------------------------------------------
[2025-06-03 21:36:18] 2025-06-03 19:21:23,536 | INFO     | PanDA job id: 6677455308
[2025-06-03 21:36:18] 2025-06-03 19:21:23,536 | INFO     | task id: 45006595
[2025-06-03 21:36:18] 2025-06-03 19:21:23,536 | INFO     | errors: (none)
[2025-06-03 21:36:18] 2025-06-03 19:21:23,536 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:36:18] 2025-06-03 19:21:23,536 | INFO     | pilot state: finished 
[2025-06-03 21:36:18] 2025-06-03 19:21:23,536 | INFO     | transexitcode: 0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,537 | INFO     | exeerrorcode: 0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,537 | INFO     | exeerrordiag: 
[2025-06-03 21:36:18] 2025-06-03 19:21:23,537 | INFO     | exitcode: 0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,537 | INFO     | exitmsg: OK
[2025-06-03 21:36:18] 2025-06-03 19:21:23,537 | INFO     | cpuconsumptiontime: 50154 s
[2025-06-03 21:36:18] 2025-06-03 19:21:23,537 | INFO     | nevents: 400
[2025-06-03 21:36:18] 2025-06-03 19:21:23,537 | INFO     | neventsw: 0
[2025-06-03 21:36:18] 2025-06-03 19:21:23,537 | INFO     | pid: 19729
[2025-06-03 21:36:18] 2025-06-03 19:21:23,537 | INFO     | pgrp: 19729
[2025-06-03 21:36:18] 2025-06-03 19:21:23,538 | INFO     | corecount: 8
[2025-06-03 21:36:18] 2025-06-03 19:21:23,538 | INFO     | event service: False
[2025-06-03 21:36:18] 2025-06-03 19:21:23,538 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 17: 2405444, 23: 2405472, 13656: 2435234, 13660: 2444175, 13662: 2444231, 13751: 2444401}
[2025-06-03 21:36:18] 2025-06-03 19:21:23,538 | INFO     | --------------------------------------------------
[2025-06-03 21:36:18] 2025-06-03 19:21:23,538 | INFO     | 
[2025-06-03 21:36:18] 2025-06-03 19:21:23,538 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 21:36:18] 2025-06-03 19:21:24,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,113 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:36:18] 2025-06-03 19:21:24,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,113 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:36:18] 2025-06-03 19:21:24,114 | INFO     | job 6677455308 has completed (purged errors)
[2025-06-03 21:36:18] 2025-06-03 19:21:24,114 | INFO     | overall cleanup function is called
[2025-06-03 21:36:18] 2025-06-03 19:21:25,123 | INFO     | --- collectZombieJob: --- 10, [19729]
[2025-06-03 21:36:18] 2025-06-03 19:21:25,124 | INFO     | zombie collector waiting for pid 19729
[2025-06-03 21:36:18] 2025-06-03 19:21:25,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:36:18] 2025-06-03 19:21:25,124 | INFO     | collected zombie processes
[2025-06-03 21:36:18] 2025-06-03 19:21:25,124 | INFO     | will attempt to kill all subprocesses of pid=19729
[2025-06-03 21:36:18] 2025-06-03 19:21:25,233 | INFO     | process IDs to be killed: [19729] (in reverse order)
[2025-06-03 21:36:18] 2025-06-03 19:21:26,230 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:36:18] 2025-06-03 19:21:26,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:36:18] 2025-06-03 19:21:26,234 | INFO     | did not find any defunct processes belonging to 19729
[2025-06-03 21:36:18] 2025-06-03 19:21:26,237 | INFO     | did not find any defunct processes belonging to 19729
[2025-06-03 21:36:18] 2025-06-03 19:21:26,238 | INFO     | ready for new job
[2025-06-03 21:36:18] 2025-06-03 19:21:26,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:36:18] 2025-06-03 19:21:26,240 | INFO     | **************************************
[2025-06-03 21:36:18] 2025-06-03 19:21:26,240 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:36:18] 2025-06-03 19:21:26,241 | INFO     | **************************************
[2025-06-03 21:36:18] 2025-06-03 19:21:26,241 | INFO     | 
[2025-06-03 21:36:18] 2025-06-03 19:21:26,241 | INFO     | pilot is running in a VM
[2025-06-03 21:36:18] 2025-06-03 19:21:26,242 | INFO     | architecture information:
[2025-06-03 21:36:18] 2025-06-03 19:21:26,251 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:36:18] 2025-06-03 19:21:26,396 | INFO     | cat /etc/os-release:
[2025-06-03 21:36:18] NAME="CentOS Linux"
[2025-06-03 21:36:18] VERSION="7 (Core)"
[2025-06-03 21:36:18] ID="centos"
[2025-06-03 21:36:18] ID_LIKE="rhel fedora"
[2025-06-03 21:36:18] VERSION_ID="7"
[2025-06-03 21:36:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:36:18] ANSI_COLOR="0;31"
[2025-06-03 21:36:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:36:18] HOME_URL="https://www.centos.org/"
[2025-06-03 21:36:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:36:18] 
[2025-06-03 21:36:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:36:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:36:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:36:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:36:18] 
[2025-06-03 21:36:18] 2025-06-03 19:21:26,396 | INFO     | **************************************
[2025-06-03 21:36:18] 2025-06-03 19:21:26,900 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 21:36:18] 2025-06-03 19:21:27,112 | INFO     | sufficient remaining disk space (497120444416 B)
[2025-06-03 21:36:18] 2025-06-03 19:21:27,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:36:18] 2025-06-03 19:21:27,113 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:36:18] 2025-06-03 19:21:27,113 | INFO     | update_server=False
[2025-06-03 21:36:18] 2025-06-03 19:21:27,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:36:18] 2025-06-03 19:21:27,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:36:18] 2025-06-03 19:21:27,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:36:18] 2025-06-03 19:21:27,116 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:36:18] 2025-06-03 19:21:27,117 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:36:18] 2025-06-03 19:21:27,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:36:18] 2025-06-03 19:21:27,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:36:18] 2025-06-03 19:21:27,217 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 21:36:18] 2025-06-03 19:21:27,218 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 21:36:18] 2025-06-03 19:21:27,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:36:18] 2025-06-03 19:21:27,218 | INFO     | will abort loop
[2025-06-03 21:36:18] 2025-06-03 19:21:27,974 | INFO     | all data control threads have been joined
[2025-06-03 21:36:18] 2025-06-03 19:21:28,119 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:28,150 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:28,156 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:28,159 | INFO     | [job] validate thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:28,223 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:28,238 | INFO     | all payload control threads have been joined
[2025-06-03 21:36:18] 2025-06-03 19:21:28,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:36:18] 2025-06-03 19:21:28,569 | INFO     | all job control threads have been joined
[2025-06-03 21:36:18] 2025-06-03 19:21:28,691 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:28,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:28,980 | INFO     | [data] control thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:29,111 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:29,121 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:29,127 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:29,234 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:29,244 | INFO     | [payload] control thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:29,558 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:29,575 | INFO     | [job] control thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:31,122 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:36:18] 2025-06-03 19:21:32,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140404809586496)>', '<ExcThread(monitor, started 140403621754624)>']
[2025-06-03 21:36:18] 2025-06-03 19:21:33,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:36:18] 2025-06-03 19:21:33,154 | INFO     | [monitor] control thread has ended
[2025-06-03 21:36:18] 2025-06-03 19:21:37,705 | INFO     | all workflow threads have been joined
[2025-06-03 21:36:18] 2025-06-03 19:21:37,706 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:36:18] 2025-06-03 19:21:37,706 | INFO     | traces error code: 0
[2025-06-03 21:36:18] 2025-06-03 19:21:37,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:36:18] 2025-06-03 19:21:37,990 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:36:18] 2025-06-03 19:21:38,023 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:36:18] 2025-06-03 19:21:38,104 [wrapper] pilotpid: 27566
[2025-06-03 21:36:18] 2025-06-03 19:21:38,130 [wrapper] Pilot exit status: 0
[2025-06-03 21:36:18] 2025-06-03 19:21:38,450 [wrapper] pandaids: 6677455308
[2025-06-03 21:36:18] 2025-06-03 19:21:39,124 [wrapper] cleanup supervisor_pilot 29947 27567
[2025-06-03 21:36:18] 2025-06-03 19:21:39,235 [wrapper] Test setup, not cleaning
[2025-06-03 21:36:18] 2025-06-03 19:21:39,331 [wrapper] apfmon messages muted
[2025-06-03 21:36:18] 2025-06-03 19:21:39,450 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:36:18] 2025-06-03 19:21:39,520 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:36:18]  *** Error codes and diagnostics ***
[2025-06-03 21:36:18]     "exeErrorCode": 0,
[2025-06-03 21:36:18]     "exeErrorDiag": "",
[2025-06-03 21:36:18]     "pilotErrorCode": 0,
[2025-06-03 21:36:18]     "pilotErrorDiag": "",
[2025-06-03 21:36:18]  *** Listing of results directory ***
[2025-06-03 21:36:18] total 391472
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc    495897 Jun  3 05:41 pilot3.tar.gz
[2025-06-03 21:36:18] -rwx------. 1 boinc boinc     37140 Jun  3 05:45 runpilot2-wrapper.sh
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc      5111 Jun  3 05:45 queuedata.json
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:36:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:31 run_atlas
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:31 job.xml
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc      6391 Jun  3 17:31 init_data.xml
[2025-06-03 21:36:18] -rw-r--r--. 2 boinc boinc 212771587 Jun  3 17:31 EVNT.45006593._000745.pool.root.1
[2025-06-03 21:36:18] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:31 start_atlas.sh
[2025-06-03 21:36:18] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:31 shared
[2025-06-03 21:36:18] -rw-r--r--. 2 boinc boinc    508876 Jun  3 17:31 input.tar.gz
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:31 boinc_lockfile
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:31 pandaJob.out
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc    982716 Jun  3 17:31 agis_schedconf.cvmfs.json
[2025-06-03 21:36:18] drwx------. 4 boinc boinc      4096 Jun  3 17:31 pilot3
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc 181135946 Jun  3 21:18 HITS.45006595._018620.pool.root.1
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:18 boinc_task_state.xml
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc      1013 Jun  3 21:19 memory_monitor_summary.json
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc   1603667 Jun  3 21:19 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc    387138 Jun  3 21:19 log.45006595._018620.job.log.tgz.1
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc        95 Jun  3 21:20 pilot_heartbeat.json
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc      7690 Jun  3 21:21 heartbeat.json
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc      4725 Jun  3 21:21 pilotlog.txt
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc   1181075 Jun  3 21:21 log.45006595._018620.job.log.1
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc       357 Jun  3 21:21 output.list
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:21 runtime_log
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc   1587200 Jun  3 21:21 result.tar.gz
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc      8659 Jun  3 21:21 runtime_log.err
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc       656 Jun  3 21:21 FgPNDmylXg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHphKDmv8VSYn.diag
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:36 boinc_mmap_file
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:36 wrapper_checkpoint.txt
[2025-06-03 21:36:18] -rw-r--r--. 1 boinc boinc     20508 Jun  3 21:36 stderr.txt
[2025-06-03 21:36:18] HITS file was successfully produced:
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc 181135946 Jun  3 21:18 shared/HITS.pool.root.1
[2025-06-03 21:36:18]  *** Contents of shared directory: ***
[2025-06-03 21:36:18] total 386748
[2025-06-03 21:36:18] -rw-r--r--. 2 boinc boinc 212771587 Jun  3 17:31 ATLAS.root_0
[2025-06-03 21:36:18] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:31 start_atlas.sh
[2025-06-03 21:36:18] -rw-r--r--. 2 boinc boinc    508876 Jun  3 17:31 input.tar.gz
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc 181135946 Jun  3 21:18 HITS.pool.root.1
[2025-06-03 21:36:18] -rw-------. 1 boinc boinc   1587200 Jun  3 21:21 result.tar.gz
21:36:20 (16229): run_atlas exited; CPU time 50338.919066
21:36:20 (16229): called boinc_finish(0)

</stderr_txt>
]]>

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