Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:38:29 (17681): wrapper (7.7.26015): starting
15:38:29 (17681): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:38:29] Arguments: --nthreads 8
[2025-06-03 15:38:29] Threads: 8
[2025-06-03 15:38:29] Checking for CVMFS
[2025-06-03 15:38:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:38:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:38:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:38:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:38:30] 2.11.2.0 13959 32019 88860 146743 1 214 18969103 25165824 3368 130560 0 16893912 99.761 18138220 3357 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:38:30] CVMFS is ok
[2025-06-03 15:38:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:38:30] Checking for apptainer binary...
[2025-06-03 15:38:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:38:30] Running /usr/bin/apptainer --version
[2025-06-03 15:38:30] apptainer version 1.3.2-1.el7
[2025-06-03 15:38:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:38:33] cg-vwn499.simple-grid.lan
[2025-06-03 15:38:33] apptainer works
[2025-06-03 15:38:33] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:38:33] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:38:33] Starting ATLAS job with PandaID=6677454948
[2025-06-03 15:38:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:06:05]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:06:05] 2025-06-03 17:20:32,713 | INFO     | monitor loop #943: job 0:6677454948 is in state 'finished'
[2025-06-03 20:06:05] 2025-06-03 17:20:32,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,219 | INFO     | monitor loop #944: job 0:6677454948 is in state 'finished'
[2025-06-03 20:06:05] 2025-06-03 17:20:35,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,355 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 20:06:05] 2025-06-03 17:20:35,356 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6677454948/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,356 | INFO     | extracted standard info from prmon json
[2025-06-03 20:06:05] 2025-06-03 17:20:35,356 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:06:05] 2025-06-03 17:20:35,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:06:05] 2025-06-03 17:20:35,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:06:05] 2025-06-03 17:20:35,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:06:05] 2025-06-03 17:20:35,361 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:06:05] 2025-06-03 17:20:35,362 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,365 | INFO     | sum of deviations: -21183163963.00001
[2025-06-03 20:06:05] 2025-06-03 17:20:35,365 | INFO     | mean x: 1748964626.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,366 | INFO     | mean y: 2542279.558685446
[2025-06-03 20:06:05] 2025-06-03 17:20:35,366 | INFO     | -- intersect: 12366690187.982899
[2025-06-03 20:06:05] 2025-06-03 17:20:35,366 | INFO     | intersect: 12366690187.982899
[2025-06-03 20:06:05] 2025-06-03 17:20:35,366 | INFO     | chi2: 4.848995306128316
[2025-06-03 20:06:05] 2025-06-03 17:20:35,367 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,368 | INFO     | sum of deviations: -5204659080.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,369 | INFO     | mean x: 1748964473.5
[2025-06-03 20:06:05] 2025-06-03 17:20:35,369 | INFO     | mean y: 2553904.625
[2025-06-03 20:06:05] 2025-06-03 17:20:35,369 | INFO     | -- intersect: 3264786212.9193525
[2025-06-03 20:06:05] 2025-06-03 17:20:35,369 | INFO     | intersect: 3264786212.9193525
[2025-06-03 20:06:05] 2025-06-03 17:20:35,369 | INFO     | chi2: 4.113754974834167
[2025-06-03 20:06:05] 2025-06-03 17:20:35,369 | INFO     | current chi2=4.113754974834167 (change=15.162735471509498 %)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,370 | INFO     | right removable region: 207
[2025-06-03 20:06:05] 2025-06-03 17:20:35,370 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,371 | INFO     | sum of deviations: -87134863027.49998
[2025-06-03 20:06:05] 2025-06-03 17:20:35,372 | INFO     | mean x: 1748964778.5
[2025-06-03 20:06:05] 2025-06-03 17:20:35,372 | INFO     | mean y: 2590930.158653846
[2025-06-03 20:06:05] 2025-06-03 17:20:35,372 | INFO     | -- intersect: 54617928947.242805
[2025-06-03 20:06:05] 2025-06-03 17:20:35,372 | INFO     | intersect: 54617928947.242805
[2025-06-03 20:06:05] 2025-06-03 17:20:35,372 | INFO     | chi2: 1.152192152531465
[2025-06-03 20:06:05] 2025-06-03 17:20:35,372 | INFO     | current chi2=1.152192152531465 (change=76.23853850558923 %)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,373 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,374 | INFO     | sum of deviations: -96712712116.99998
[2025-06-03 20:06:05] 2025-06-03 17:20:35,374 | INFO     | mean x: 1748964931.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,374 | INFO     | mean y: 2598315.7536945813
[2025-06-03 20:06:05] 2025-06-03 17:20:35,374 | INFO     | -- intersect: 65211767206.0193
[2025-06-03 20:06:05] 2025-06-03 17:20:35,375 | INFO     | intersect: 65211767206.0193
[2025-06-03 20:06:05] 2025-06-03 17:20:35,375 | INFO     | chi2: 0.9722537078121576
[2025-06-03 20:06:05] 2025-06-03 17:20:35,375 | INFO     | current chi2=0.9722537078121576 (change=15.61705174991577 %)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,375 | INFO     | left removable region: 20
[2025-06-03 20:06:05] 2025-06-03 17:20:35,375 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,377 | INFO     | sum of deviations: -72135749165.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,377 | INFO     | mean x: 1748965053.0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,377 | INFO     | mean y: 2606300.080213904
[2025-06-03 20:06:05] 2025-06-03 17:20:35,377 | INFO     | -- intersect: 62224160398.73112
[2025-06-03 20:06:05] 2025-06-03 17:20:35,377 | INFO     | intersect: 62224160398.73112
[2025-06-03 20:06:05] 2025-06-03 17:20:35,377 | INFO     | chi2: 0.16785898929788273
[2025-06-03 20:06:05] 2025-06-03 17:20:35,378 | INFO     | -- intersect: 62224160398.73112
[2025-06-03 20:06:05] 2025-06-03 17:20:35,378 | INFO     | current memory leak: -35.58 B/s (using 187 data points, chi2=0.17)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,379 | INFO     | ..............................
[2025-06-03 20:06:05] 2025-06-03 17:20:35,379 | INFO     | . Timing measurements:
[2025-06-03 20:06:05] 2025-06-03 17:20:35,379 | INFO     | . get job = 0 s
[2025-06-03 20:06:05] 2025-06-03 17:20:35,379 | INFO     | . initial setup = 3 s
[2025-06-03 20:06:05] 2025-06-03 17:20:35,379 | INFO     | . payload setup = 35 s
[2025-06-03 20:06:05] 2025-06-03 17:20:35,379 | INFO     | . stage-in = 0 s
[2025-06-03 20:06:05] 2025-06-03 17:20:35,379 | INFO     | . payload execution = 13092 s
[2025-06-03 20:06:05] 2025-06-03 17:20:35,379 | INFO     | . stage-out = 2 s
[2025-06-03 20:06:05] 2025-06-03 17:20:35,379 | INFO     | . log creation = 0 s
[2025-06-03 20:06:05] 2025-06-03 17:20:35,380 | INFO     | ..............................
[2025-06-03 20:06:05] 2025-06-03 17:20:35,507 | INFO     | 
[2025-06-03 20:06:05] 2025-06-03 17:20:35,507 | INFO     | job summary report
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | --------------------------------------------------
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | PanDA job id: 6677454948
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | task id: 45006595
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | errors: (none)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | pilot state: finished 
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | transexitcode: 0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | exeerrorcode: 0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | exeerrordiag: 
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | exitcode: 0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | exitmsg: OK
[2025-06-03 20:06:05] 2025-06-03 17:20:35,508 | INFO     | cpuconsumptiontime: 46949 s
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | nevents: 400
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | neventsw: 0
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | pid: 18133
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | pgrp: 18133
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | corecount: 8
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | event service: False
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405238, 13: 2405238, 23: 2405294, 25: 2405528, 34: 2405684, 13132: 2435206, 13135: 2444147, 13138: 2444203, 13223: 2444373}
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | --------------------------------------------------
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | 
[2025-06-03 20:06:05] 2025-06-03 17:20:35,509 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 20:06:05] 2025-06-03 17:20:35,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,549 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,549 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,549 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,551 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:06:05] 2025-06-03 17:20:35,551 | INFO     | job 6677454948 has completed (purged errors)
[2025-06-03 20:06:05] 2025-06-03 17:20:35,551 | INFO     | overall cleanup function is called
[2025-06-03 20:06:05] 2025-06-03 17:20:36,561 | INFO     | --- collectZombieJob: --- 10, [18133]
[2025-06-03 20:06:05] 2025-06-03 17:20:36,561 | INFO     | zombie collector waiting for pid 18133
[2025-06-03 20:06:05] 2025-06-03 17:20:36,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:06:05] 2025-06-03 17:20:36,562 | INFO     | collected zombie processes
[2025-06-03 20:06:05] 2025-06-03 17:20:36,562 | INFO     | will attempt to kill all subprocesses of pid=18133
[2025-06-03 20:06:05] 2025-06-03 17:20:36,662 | INFO     | process IDs to be killed: [18133] (in reverse order)
[2025-06-03 20:06:05] 2025-06-03 17:20:36,825 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:06:05] 2025-06-03 17:20:36,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:06:05] 2025-06-03 17:20:36,829 | INFO     | did not find any defunct processes belonging to 18133
[2025-06-03 20:06:05] 2025-06-03 17:20:36,832 | INFO     | did not find any defunct processes belonging to 18133
[2025-06-03 20:06:05] 2025-06-03 17:20:36,833 | INFO     | ready for new job
[2025-06-03 20:06:05] 2025-06-03 17:20:36,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:06:05] 2025-06-03 17:20:36,835 | INFO     | **************************************
[2025-06-03 20:06:05] 2025-06-03 17:20:36,835 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:06:05] 2025-06-03 17:20:36,835 | INFO     | **************************************
[2025-06-03 20:06:05] 2025-06-03 17:20:36,835 | INFO     | 
[2025-06-03 20:06:05] 2025-06-03 17:20:36,836 | INFO     | pilot is running in a VM
[2025-06-03 20:06:05] 2025-06-03 17:20:36,836 | INFO     | architecture information:
[2025-06-03 20:06:05] 2025-06-03 17:20:36,836 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:06:05] 2025-06-03 17:20:36,904 | INFO     | cat /etc/os-release:
[2025-06-03 20:06:05] NAME="CentOS Linux"
[2025-06-03 20:06:05] VERSION="7 (Core)"
[2025-06-03 20:06:05] ID="centos"
[2025-06-03 20:06:05] ID_LIKE="rhel fedora"
[2025-06-03 20:06:05] VERSION_ID="7"
[2025-06-03 20:06:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:06:05] ANSI_COLOR="0;31"
[2025-06-03 20:06:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:06:05] HOME_URL="https://www.centos.org/"
[2025-06-03 20:06:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:06:05] 
[2025-06-03 20:06:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:06:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:06:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:06:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:06:05] 
[2025-06-03 20:06:05] 2025-06-03 17:20:36,904 | INFO     | **************************************
[2025-06-03 20:06:05] 2025-06-03 17:20:37,407 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 20:06:05] 2025-06-03 17:20:37,697 | INFO     | sufficient remaining disk space (496902340608 B)
[2025-06-03 20:06:05] 2025-06-03 17:20:37,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:06:05] 2025-06-03 17:20:37,698 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:06:05] 2025-06-03 17:20:37,698 | INFO     | update_server=False
[2025-06-03 20:06:05] 2025-06-03 17:20:37,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:06:05] 2025-06-03 17:20:37,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:06:05] 2025-06-03 17:20:37,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:06:05] 2025-06-03 17:20:37,730 | INFO     | all payload control threads have been joined
[2025-06-03 20:06:05] 2025-06-03 17:20:37,735 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 20:06:05] 2025-06-03 17:20:37,736 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 20:06:05] 2025-06-03 17:20:37,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:06:05] 2025-06-03 17:20:37,736 | INFO     | will abort loop
[2025-06-03 20:06:05] 2025-06-03 17:20:38,620 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:06:05] 2025-06-03 17:20:38,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:06:05] 2025-06-03 17:20:38,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:06:05] 2025-06-03 17:20:38,638 | INFO     | all data control threads have been joined
[2025-06-03 20:06:05] 2025-06-03 17:20:38,703 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:38,708 | INFO     | all job control threads have been joined
[2025-06-03 20:06:05] 2025-06-03 17:20:38,736 | INFO     | [payload] control thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:38,741 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:38,973 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:39,471 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:39,644 | INFO     | [data] control thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:39,709 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:39,713 | INFO     | [job] control thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:39,807 | INFO     | [job] validate thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:40,004 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:40,146 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:40,170 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:40,191 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:40,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:06:05] 2025-06-03 17:20:41,522 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:41,708 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:48,471 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:06:05] 2025-06-03 17:20:49,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:06:05] 2025-06-03 17:20:51,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271695238976)>', '<ExcThread(monitor, started 140270804920064)>']
[2025-06-03 20:06:05] 2025-06-03 17:20:51,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:06:05] 2025-06-03 17:20:51,698 | INFO     | [monitor] control thread has ended
[2025-06-03 20:06:05] 2025-06-03 17:20:56,155 | INFO     | all workflow threads have been joined
[2025-06-03 20:06:05] 2025-06-03 17:20:56,155 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:06:05] 2025-06-03 17:20:56,156 | INFO     | traces error code: 0
[2025-06-03 20:06:05] 2025-06-03 17:20:56,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:06:05] 2025-06-03 17:20:56,650 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:06:05] 2025-06-03 17:20:56,704 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:06:05] 2025-06-03 17:20:56,744 [wrapper] pilotpid: 32534
[2025-06-03 20:06:05] 2025-06-03 17:20:56,798 [wrapper] Pilot exit status: 0
[2025-06-03 20:06:05] 2025-06-03 17:20:57,073 [wrapper] pandaids: 6677454948
[2025-06-03 20:06:05] 2025-06-03 17:20:57,753 [wrapper] cleanup supervisor_pilot  4943 32535
[2025-06-03 20:06:05] 2025-06-03 17:20:57,798 [wrapper] Test setup, not cleaning
[2025-06-03 20:06:05] 2025-06-03 17:20:57,854 [wrapper] apfmon messages muted
[2025-06-03 20:06:05] 2025-06-03 17:20:57,907 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:06:05] 2025-06-03 17:20:57,956 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:06:05]  *** Error codes and diagnostics ***
[2025-06-03 20:06:05]     "exeErrorCode": 0,
[2025-06-03 20:06:05]     "exeErrorDiag": "",
[2025-06-03 20:06:05]     "pilotErrorCode": 0,
[2025-06-03 20:06:05]     "pilotErrorDiag": "",
[2025-06-03 20:06:05]  *** Listing of results directory ***
[2025-06-03 20:06:05] total 394700
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc    495897 Jun  3 04:50 pilot3.tar.gz
[2025-06-03 20:06:05] -rwx------. 1 boinc boinc     37140 Jun  3 05:31 runpilot2-wrapper.sh
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc      5111 Jun  3 05:31 queuedata.json
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:06:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:38 run_atlas
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:38 job.xml
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc      6392 Jun  3 15:38 init_data.xml
[2025-06-03 20:06:05] -rw-r--r--. 2 boinc boinc 214915769 Jun  3 15:38 EVNT.45006593._000733.pool.root.1
[2025-06-03 20:06:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:38 start_atlas.sh
[2025-06-03 20:06:05] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:38 shared
[2025-06-03 20:06:05] -rw-r--r--. 2 boinc boinc    508875 Jun  3 15:38 input.tar.gz
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:38 boinc_lockfile
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc      2524 Jun  3 15:38 pandaJob.out
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc    982724 Jun  3 15:39 agis_schedconf.cvmfs.json
[2025-06-03 20:06:05] drwx------. 4 boinc boinc      4096 Jun  3 15:39 pilot3
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc 182384785 Jun  3 19:17 HITS.45006595._018314.pool.root.1
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc       531 Jun  3 19:18 boinc_task_state.xml
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc      1020 Jun  3 19:19 memory_monitor_summary.json
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc   1603667 Jun  3 19:19 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc    375670 Jun  3 19:19 log.45006595._018314.job.log.tgz.1
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc        95 Jun  3 19:20 pilot_heartbeat.json
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc      7692 Jun  3 19:20 heartbeat.json
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc      4674 Jun  3 19:20 pilotlog.txt
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc   1153270 Jun  3 19:20 log.45006595._018314.job.log.1
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc       357 Jun  3 19:20 output.list
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:20 runtime_log
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc   1546240 Jun  3 19:20 result.tar.gz
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc       656 Jun  3 19:20 3SDLDmOYXg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtFXKDmgTyehn.diag
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc      8659 Jun  3 19:20 runtime_log.err
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:06 boinc_mmap_file
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:06 wrapper_checkpoint.txt
[2025-06-03 20:06:05] -rw-r--r--. 1 boinc boinc     20700 Jun  3 20:06 stderr.txt
[2025-06-03 20:06:05] HITS file was successfully produced:
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc 182384785 Jun  3 19:17 shared/HITS.pool.root.1
[2025-06-03 20:06:05]  *** Contents of shared directory: ***
[2025-06-03 20:06:05] total 390020
[2025-06-03 20:06:05] -rw-r--r--. 2 boinc boinc 214915769 Jun  3 15:38 ATLAS.root_0
[2025-06-03 20:06:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:38 start_atlas.sh
[2025-06-03 20:06:05] -rw-r--r--. 2 boinc boinc    508875 Jun  3 15:38 input.tar.gz
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc 182384785 Jun  3 19:17 HITS.pool.root.1
[2025-06-03 20:06:05] -rw-------. 1 boinc boinc   1546240 Jun  3 19:20 result.tar.gz
20:06:07 (17681): run_atlas exited; CPU time 47112.198998
20:06:07 (17681): called boinc_finish(0)

</stderr_txt>
]]>

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