Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:16:14 (1062956): wrapper (7.7.26015): starting
14:16:14 (1062956): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 14:16:14] Arguments: --nthreads 3
[2025-06-05 14:16:14] Threads: 3
[2025-06-05 14:16:14] Checking for CVMFS
[2025-06-05 14:16:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:16:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:16:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:16:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:16:14] 2.12.7.0 68668 7457 48004 146819 0 56 6786354 10240000 0 130560 0 2644596 99.982 1704101 1398 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-06-05 14:16:14] CVMFS is ok
[2025-06-05 14:16:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:16:14] Checking for apptainer binary...
[2025-06-05 14:16:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:16:14] Running /usr/bin/apptainer --version
[2025-06-05 14:16:14] apptainer version 1.3.4
[2025-06-05 14:16:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:16:14] ahanlst03
[2025-06-05 14:16:14] apptainer works
[2025-06-05 14:16:14] Set ATHENA_PROC_NUMBER=3
[2025-06-05 14:16:14] Set ATHENA_CORE_NUMBER=3
[2025-06-05 14:16:14] Starting ATLAS job with PandaID=6677441856
[2025-06-05 14:16:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 19:12:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 19:12:41] 2025-06-05 17:12:26,340 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 19:12:41] 2025-06-05 17:12:26,340 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 19:12:41] 2025-06-05 17:12:26,340 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 19:12:41] 2025-06-05 17:12:26,340 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 19:12:41] 2025-06-05 17:12:26,346 | INFO     | fitting pss+swap vs Time
[2025-06-05 19:12:41] 2025-06-05 17:12:26,347 | INFO     | sum of square deviations: 7641036290.0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,350 | INFO     | sum of deviations: -125169520472.00002
[2025-06-05 19:12:41] 2025-06-05 17:12:26,350 | INFO     | mean x: 1749134662.0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,351 | INFO     | mean y: 2361986.4536082475
[2025-06-05 19:12:41] 2025-06-05 17:12:26,351 | INFO     | -- intersect: 28655327183.075367
[2025-06-05 19:12:41] 2025-06-05 17:12:26,351 | INFO     | intersect: 28655327183.075367
[2025-06-05 19:12:41] 2025-06-05 17:12:26,353 | INFO     | chi2: 2.6104731248434163
[2025-06-05 19:12:41] 2025-06-05 17:12:26,354 | INFO     | sum of square deviations: 7253894147.5
[2025-06-05 19:12:41] 2025-06-05 17:12:26,362 | INFO     | sum of deviations: -106355302580.50003
[2025-06-05 19:12:41] 2025-06-05 17:12:26,362 | INFO     | mean x: 1749134509.5
[2025-06-05 19:12:41] 2025-06-05 17:12:26,363 | INFO     | mean y: 2369307.29020979
[2025-06-05 19:12:41] 2025-06-05 17:12:26,363 | INFO     | -- intersect: 25647867605.053593
[2025-06-05 19:12:41] 2025-06-05 17:12:26,363 | INFO     | intersect: 25647867605.053593
[2025-06-05 19:12:41] 2025-06-05 17:12:26,365 | INFO     | chi2: 1.9551578462461192
[2025-06-05 19:12:41] 2025-06-05 17:12:26,365 | INFO     | current chi2=1.9551578462461192 (change=25.103314504975216 %)
[2025-06-05 19:12:41] 2025-06-05 17:12:26,366 | INFO     | sum of square deviations: 6880054580.0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,372 | INFO     | sum of deviations: -104290425039.0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,373 | INFO     | mean x: 1749134357.0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,373 | INFO     | mean y: 2370149.7010676158
[2025-06-05 19:12:41] 2025-06-05 17:12:26,373 | INFO     | -- intersect: 26516398987.804844
[2025-06-05 19:12:41] 2025-06-05 17:12:26,374 | INFO     | intersect: 26516398987.804844
[2025-06-05 19:12:41] 2025-06-05 17:12:26,374 | INFO     | chi2: 1.9458057003692801
[2025-06-05 19:12:41] 2025-06-05 17:12:26,375 | INFO     | current chi2=1.9458057003692801 (change=0.47833201267074643 %)
[2025-06-05 19:12:41] 2025-06-05 17:12:26,375 | INFO     | right removable region: 280
[2025-06-05 19:12:41] 2025-06-05 17:12:26,376 | INFO     | sum of square deviations: 7253894147.5
[2025-06-05 19:12:41] 2025-06-05 17:12:26,382 | INFO     | sum of deviations: -156595388506.50006
[2025-06-05 19:12:41] 2025-06-05 17:12:26,382 | INFO     | mean x: 1749134814.5
[2025-06-05 19:12:41] 2025-06-05 17:12:26,382 | INFO     | mean y: 2374217.1153846155
[2025-06-05 19:12:41] 2025-06-05 17:12:26,382 | INFO     | -- intersect: 37762291891.303154
[2025-06-05 19:12:41] 2025-06-05 17:12:26,383 | INFO     | intersect: 37762291891.303154
[2025-06-05 19:12:41] 2025-06-05 17:12:26,383 | INFO     | chi2: 1.306773892264216
[2025-06-05 19:12:41] 2025-06-05 17:12:26,384 | INFO     | current chi2=1.306773892264216 (change=49.94110914884059 %)
[2025-06-05 19:12:41] 2025-06-05 17:12:26,385 | INFO     | sum of square deviations: 6880054580.0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,389 | INFO     | sum of deviations: -145677660021.0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,390 | INFO     | mean x: 1749134967.0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,390 | INFO     | mean y: 2369755.8149466193
[2025-06-05 19:12:41] 2025-06-05 17:12:26,390 | INFO     | -- intersect: 37038397027.19585
[2025-06-05 19:12:41] 2025-06-05 17:12:26,390 | INFO     | intersect: 37038397027.19585
[2025-06-05 19:12:41] 2025-06-05 17:12:26,391 | INFO     | chi2: 1.3003383387487035
[2025-06-05 19:12:41] 2025-06-05 17:12:26,391 | INFO     | current chi2=1.3003383387487035 (change=0.49247643786039935 %)
[2025-06-05 19:12:41] 2025-06-05 17:12:26,391 | INFO     | left removable region: 20
[2025-06-05 19:12:41] 2025-06-05 17:12:26,392 | INFO     | sum of square deviations: 5449944045.0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,396 | INFO     | sum of deviations: -98025764323.00003
[2025-06-05 19:12:41] 2025-06-05 17:12:26,396 | INFO     | mean x: 1749134936.5
[2025-06-05 19:12:41] 2025-06-05 17:12:26,396 | INFO     | mean y: 2366408.453846154
[2025-06-05 19:12:41] 2025-06-05 17:12:26,396 | INFO     | -- intersect: 31463292913.15425
[2025-06-05 19:12:41] 2025-06-05 17:12:26,397 | INFO     | intersect: 31463292913.15425
[2025-06-05 19:12:41] 2025-06-05 17:12:26,397 | INFO     | chi2: 0.5738153881305488
[2025-06-05 19:12:41] 2025-06-05 17:12:26,398 | INFO     | -- intersect: 31463292913.15425
[2025-06-05 19:12:41] 2025-06-05 17:12:26,398 | INFO     | current memory leak: -17.99 B/s (using 260 data points, chi2=0.57)
[2025-06-05 19:12:41] 2025-06-05 17:12:26,399 | INFO     | ..............................
[2025-06-05 19:12:41] 2025-06-05 17:12:26,399 | INFO     | . Timing measurements:
[2025-06-05 19:12:41] 2025-06-05 17:12:26,399 | INFO     | . get job = 0 s
[2025-06-05 19:12:41] 2025-06-05 17:12:26,400 | INFO     | . initial setup = 3 s
[2025-06-05 19:12:41] 2025-06-05 17:12:26,400 | INFO     | . payload setup = 8 s
[2025-06-05 19:12:41] 2025-06-05 17:12:26,400 | INFO     | . stage-in = 0 s
[2025-06-05 19:12:41] 2025-06-05 17:12:26,400 | INFO     | . payload execution = 17711 s
[2025-06-05 19:12:41] 2025-06-05 17:12:26,400 | INFO     | . stage-out = 6 s
[2025-06-05 19:12:41] 2025-06-05 17:12:26,401 | INFO     | . log creation = 0 s
[2025-06-05 19:12:41] 2025-06-05 17:12:26,401 | INFO     | ..............................
[2025-06-05 19:12:41] 2025-06-05 17:12:26,574 | INFO     | 17762s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 19:12:41] 2025-06-05 17:12:26,857 | INFO     | 
[2025-06-05 19:12:41] 2025-06-05 17:12:26,858 | INFO     | job summary report
[2025-06-05 19:12:41] 2025-06-05 17:12:26,858 | INFO     | --------------------------------------------------
[2025-06-05 19:12:41] 2025-06-05 17:12:26,859 | INFO     | PanDA job id: 6677441856
[2025-06-05 19:12:41] 2025-06-05 17:12:26,859 | INFO     | task id: 45006595
[2025-06-05 19:12:41] 2025-06-05 17:12:26,859 | INFO     | errors: (none)
[2025-06-05 19:12:41] 2025-06-05 17:12:26,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 19:12:41] 2025-06-05 17:12:26,860 | INFO     | pilot state: finished 
[2025-06-05 19:12:41] 2025-06-05 17:12:26,860 | INFO     | transexitcode: 0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,861 | INFO     | exeerrorcode: 0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,861 | INFO     | exeerrordiag: 
[2025-06-05 19:12:41] 2025-06-05 17:12:26,862 | INFO     | exitcode: 0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,862 | INFO     | exitmsg: OK
[2025-06-05 19:12:41] 2025-06-05 17:12:26,862 | INFO     | cpuconsumptiontime: 51871 s
[2025-06-05 19:12:41] 2025-06-05 17:12:26,863 | INFO     | nevents: 400
[2025-06-05 19:12:41] 2025-06-05 17:12:26,863 | INFO     | neventsw: 0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,863 | INFO     | pid: 1072964
[2025-06-05 19:12:41] 2025-06-05 17:12:26,864 | INFO     | pgrp: 1072964
[2025-06-05 19:12:41] 2025-06-05 17:12:26,864 | INFO     | corecount: 3
[2025-06-05 19:12:41] 2025-06-05 17:12:26,864 | INFO     | event service: False
[2025-06-05 19:12:41] 2025-06-05 17:12:26,865 | INFO     | sizes: {0: 2397176, 1: 2397375, 5: 2397581, 12: 2397637, 17722: 2429575, 17723: 2429574, 17730: 2438713, 17733: 2438769, 17743: 2438939}
[2025-06-05 19:12:41] 2025-06-05 17:12:26,865 | INFO     | --------------------------------------------------
[2025-06-05 19:12:41] 2025-06-05 17:12:26,865 | INFO     | 
[2025-06-05 19:12:41] 2025-06-05 17:12:26,866 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 19:12:41] 2025-06-05 17:12:26,897 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,898 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,898 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,898 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,900 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 19:12:41] 2025-06-05 17:12:26,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,901 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 19:12:41] 2025-06-05 17:12:26,901 | INFO     | job 6677441856 has completed (purged errors)
[2025-06-05 19:12:41] 2025-06-05 17:12:26,901 | INFO     | overall cleanup function is called
[2025-06-05 19:12:41] 2025-06-05 17:12:27,717 | INFO     | PID=1066545 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 19:12:41] 2025-06-05 17:12:27,910 | INFO     | --- collectZombieJob: --- 10, [1072964]
[2025-06-05 19:12:41] 2025-06-05 17:12:27,910 | INFO     | zombie collector waiting for pid 1072964
[2025-06-05 19:12:41] 2025-06-05 17:12:27,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 19:12:41] 2025-06-05 17:12:27,911 | INFO     | collected zombie processes
[2025-06-05 19:12:41] 2025-06-05 17:12:27,911 | INFO     | will attempt to kill all subprocesses of pid=1072964
[2025-06-05 19:12:41] 2025-06-05 17:12:28,050 | INFO     | process IDs to be killed: [1072964] (in reverse order)
[2025-06-05 19:12:41] 2025-06-05 17:12:28,111 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 19:12:41] 2025-06-05 17:12:28,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 19:12:41] 2025-06-05 17:12:28,116 | INFO     | did not find any defunct processes belonging to 1072964
[2025-06-05 19:12:41] 2025-06-05 17:12:28,119 | INFO     | did not find any defunct processes belonging to 1072964
[2025-06-05 19:12:41] 2025-06-05 17:12:28,120 | INFO     | ready for new job
[2025-06-05 19:12:41] 2025-06-05 17:12:28,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 19:12:41] 2025-06-05 17:12:28,123 | INFO     | **************************************
[2025-06-05 19:12:41] 2025-06-05 17:12:28,124 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 19:12:41] 2025-06-05 17:12:28,124 | INFO     | **************************************
[2025-06-05 19:12:41] 2025-06-05 17:12:28,124 | INFO     | 
[2025-06-05 19:12:41] 2025-06-05 17:12:28,125 | INFO     | architecture information:
[2025-06-05 19:12:41] 2025-06-05 17:12:28,125 | INFO     | executing command: cat /etc/os-release
[2025-06-05 19:12:41] 2025-06-05 17:12:28,147 | INFO     | cat /etc/os-release:
[2025-06-05 19:12:41] NAME="CentOS Linux"
[2025-06-05 19:12:41] VERSION="7 (Core)"
[2025-06-05 19:12:41] ID="centos"
[2025-06-05 19:12:41] ID_LIKE="rhel fedora"
[2025-06-05 19:12:41] VERSION_ID="7"
[2025-06-05 19:12:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 19:12:41] ANSI_COLOR="0;31"
[2025-06-05 19:12:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 19:12:41] HOME_URL="https://www.centos.org/"
[2025-06-05 19:12:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 19:12:41] 
[2025-06-05 19:12:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 19:12:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 19:12:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 19:12:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 19:12:41] 
[2025-06-05 19:12:41] 2025-06-05 17:12:28,148 | INFO     | **************************************
[2025-06-05 19:12:41] 2025-06-05 17:12:28,651 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 19:12:41] 2025-06-05 17:12:28,676 | INFO     | sufficient remaining disk space (33830207488 B)
[2025-06-05 19:12:41] 2025-06-05 17:12:28,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 19:12:41] 2025-06-05 17:12:28,677 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 19:12:41] 2025-06-05 17:12:28,677 | INFO     | update_server=False
[2025-06-05 19:12:41] 2025-06-05 17:12:28,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 19:12:41] 2025-06-05 17:12:28,678 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 19:12:41] 2025-06-05 17:12:28,678 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 19:12:41] 2025-06-05 17:12:28,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 19:12:41] 2025-06-05 17:12:28,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 19:12:41] 2025-06-05 17:12:28,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 19:12:41] 2025-06-05 17:12:28,962 | INFO     | all data control threads have been joined
[2025-06-05 19:12:41] 2025-06-05 17:12:29,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:12:41] 2025-06-05 17:12:29,083 | INFO     | aborting loop
[2025-06-05 19:12:41] 2025-06-05 17:12:29,253 | INFO     | all payload control threads have been joined
[2025-06-05 19:12:41] 2025-06-05 17:12:29,683 | INFO     | [job] retrieve thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:29,905 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:29,968 | INFO     | [data] control thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:30,038 | INFO     | all job control threads have been joined
[2025-06-05 19:12:41] 2025-06-05 17:12:30,088 | INFO     | [job] job monitor thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:30,097 | INFO     | [data] copytool_in thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:30,239 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:30,259 | INFO     | [payload] control thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:30,324 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:30,684 | INFO     | [data] copytool_out thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:30,896 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:30,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 19:12:41] 2025-06-05 17:12:31,003 | INFO     | [payload] validate_post thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:31,004 | INFO     | [job] validate thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:31,032 | INFO     | [payload] failed_post thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:31,044 | INFO     | [job] control thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:31,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:12:41] 2025-06-05 17:12:32,557 | INFO     | [job] queue monitor thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:34,996 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 19:12:41] 2025-06-05 17:12:36,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132407029163840)>', '<ExcThread(monitor, started 132406738646784)>']
[2025-06-05 19:12:41] 2025-06-05 17:12:36,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 19:12:41] 2025-06-05 17:12:36,717 | INFO     | [monitor] control thread has ended
[2025-06-05 19:12:41] 2025-06-05 17:12:41,398 | INFO     | all workflow threads have been joined
[2025-06-05 19:12:41] 2025-06-05 17:12:41,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 19:12:41] 2025-06-05 17:12:41,400 | INFO     | traces error code: 0
[2025-06-05 19:12:41] 2025-06-05 17:12:41,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 19:12:41] 2025-06-05 17:12:41,594 [wrapper] ==== pilot stdout END ====
[2025-06-05 19:12:41] 2025-06-05 17:12:41,598 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 19:12:41] 2025-06-05 17:12:41,601 [wrapper] pilotpid: 1066545
[2025-06-05 19:12:41] 2025-06-05 17:12:41,604 [wrapper] Pilot exit status: 0
[2025-06-05 19:12:41] 2025-06-05 17:12:41,616 [wrapper] pandaids: 6677441856
[2025-06-05 19:12:41] 2025-06-05 17:12:41,644 [wrapper] cleanup supervisor_pilot 1101808 1066546
[2025-06-05 19:12:41] 2025-06-05 17:12:41,648 [wrapper] Test setup, not cleaning
[2025-06-05 19:12:41] 2025-06-05 17:12:41,652 [wrapper] apfmon messages muted
[2025-06-05 19:12:41] 2025-06-05 17:12:41,655 [wrapper] ==== wrapper stdout END ====
[2025-06-05 19:12:41] 2025-06-05 17:12:41,658 [wrapper] ==== wrapper stderr END ====
[2025-06-05 19:12:41]  *** Error codes and diagnostics ***
[2025-06-05 19:12:41]     "exeErrorCode": 0,
[2025-06-05 19:12:41]     "exeErrorDiag": "",
[2025-06-05 19:12:41]     "pilotErrorCode": 0,
[2025-06-05 19:12:41]     "pilotErrorDiag": "",
[2025-06-05 19:12:41]  *** Listing of results directory ***
[2025-06-05 19:12:41] total 388456
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc    495897 Jun  3 03:09 pilot3.tar.gz
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc      5111 Jun  3 03:15 queuedata.json
[2025-06-05 19:12:41] -rwx------ 1 boinc boinc     37140 Jun  3 03:15 runpilot2-wrapper.sh
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc       100 Jun  5 14:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 19:12:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 14:16 run_atlas
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc       105 Jun  5 14:16 job.xml
[2025-06-05 19:12:41] -rw-r--r-- 2 boinc boinc 214833945 Jun  5 14:16 EVNT.45006593._000643.pool.root.1
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc      9392 Jun  5 14:16 init_data.xml
[2025-06-05 19:12:41] -rw-r--r-- 2 boinc boinc     15093 Jun  5 14:16 start_atlas.sh
[2025-06-05 19:12:41] drwxrwx--x 2 boinc boinc      4096 Jun  5 14:16 shared
[2025-06-05 19:12:41] -rw-r--r-- 2 boinc boinc    508878 Jun  5 14:16 input.tar.gz
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc         0 Jun  5 14:16 boinc_lockfile
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc      2524 Jun  5 14:16 pandaJob.out
[2025-06-05 19:12:41] -rw------- 1 boinc boinc    983210 Jun  5 14:16 agis_schedconf.cvmfs.json
[2025-06-05 19:12:41] drwx------ 4 boinc boinc      4096 Jun  5 14:16 pilot3
[2025-06-05 19:12:41] -rw------- 1 boinc boinc 175231190 Jun  5 19:11 HITS.45006595._016057.pool.root.1
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc       530 Jun  5 19:11 boinc_task_state.xml
[2025-06-05 19:12:41] -rw------- 1 boinc boinc      1013 Jun  5 19:12 memory_monitor_summary.json
[2025-06-05 19:12:41] -rw------- 1 boinc boinc   1598969 Jun  5 19:12 agis_ddmendpoints.agis.ALL.json
[2025-06-05 19:12:41] -rw------- 1 boinc boinc    335001 Jun  5 19:12 log.45006595._016057.job.log.tgz.1
[2025-06-05 19:12:41] -rw------- 1 boinc boinc        95 Jun  5 19:12 pilot_heartbeat.json
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc        28 Jun  5 19:12 wrapper_checkpoint.txt
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc      8192 Jun  5 19:12 boinc_mmap_file
[2025-06-05 19:12:41] -rw------- 1 boinc boinc      7650 Jun  5 19:12 heartbeat.json
[2025-06-05 19:12:41] -rw------- 1 boinc boinc      4483 Jun  5 19:12 pilotlog.txt
[2025-06-05 19:12:41] -rw------- 1 boinc boinc   1605383 Jun  5 19:12 log.45006595._016057.job.log.1
[2025-06-05 19:12:41] -rw------- 1 boinc boinc       357 Jun  5 19:12 output.list
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc       620 Jun  5 19:12 runtime_log
[2025-06-05 19:12:41] -rw------- 1 boinc boinc   1955840 Jun  5 19:12 result.tar.gz
[2025-06-05 19:12:41] -rw------- 1 boinc boinc       652 Jun  5 19:12 utWLDmvQVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcNhKDm4kYXKn.diag
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc      8766 Jun  5 19:12 runtime_log.err
[2025-06-05 19:12:41] -rw-r--r-- 1 boinc boinc     20687 Jun  5 19:12 stderr.txt
[2025-06-05 19:12:41] HITS file was successfully produced:
[2025-06-05 19:12:41] -rw------- 1 boinc boinc 175231190 Jun  5 19:11 shared/HITS.pool.root.1
[2025-06-05 19:12:41]  *** Contents of shared directory: ***
[2025-06-05 19:12:41] total 383364
[2025-06-05 19:12:41] -rw-r--r-- 2 boinc boinc 214833945 Jun  5 14:16 ATLAS.root_0
[2025-06-05 19:12:41] -rw-r--r-- 2 boinc boinc     15093 Jun  5 14:16 start_atlas.sh
[2025-06-05 19:12:41] -rw-r--r-- 2 boinc boinc    508878 Jun  5 14:16 input.tar.gz
[2025-06-05 19:12:41] -rw------- 1 boinc boinc 175231190 Jun  5 19:11 HITS.pool.root.1
[2025-06-05 19:12:41] -rw------- 1 boinc boinc   1955840 Jun  5 19:12 result.tar.gz
19:12:43 (1062956): run_atlas exited; CPU time 51950.751341
19:12:43 (1062956): called boinc_finish(0)

</stderr_txt>
]]>

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