Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:35:17 (11674): wrapper (7.7.26015): starting
15:35:17 (11674): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:35:17] Arguments: --nthreads 8
[2025-06-03 15:35:17] Threads: 8
[2025-06-03 15:35:17] Checking for CVMFS
[2025-06-03 15:35:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:35:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:35:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:35:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:35:19] 2.11.2.0 20118 31848 91020 146743 3 14 13404716 25165824 4635 130560 0 15903679 99.821 17844191 1937 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:35:19] CVMFS is ok
[2025-06-03 15:35:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:35:19] Checking for apptainer binary...
[2025-06-03 15:35:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:35:19] Running /usr/bin/apptainer --version
[2025-06-03 15:35:19] apptainer version 1.3.2-1.el7
[2025-06-03 15:35:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:35:30] cg-vwn344.simple-grid.lan
[2025-06-03 15:35:30] apptainer works
[2025-06-03 15:35:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:35:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:35:30] Starting ATLAS job with PandaID=6677454900
[2025-06-03 15:35:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:35:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:35:21] 2025-06-03 17:36:52,883 | INFO     | extracted standard info from prmon json
[2025-06-03 20:35:21] 2025-06-03 17:36:52,883 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:35:21] 2025-06-03 17:36:52,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:35:21] 2025-06-03 17:36:52,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:35:21] 2025-06-03 17:36:52,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:35:21] 2025-06-03 17:36:52,889 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:35:21] 2025-06-03 17:36:52,890 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 20:35:21] 2025-06-03 17:36:52,892 | INFO     | sum of deviations: 31595209463.500053
[2025-06-03 20:35:21] 2025-06-03 17:36:52,892 | INFO     | mean x: 1748965289.5
[2025-06-03 20:35:21] 2025-06-03 17:36:52,893 | INFO     | mean y: 2493155.6681415928
[2025-06-03 20:35:21] 2025-06-03 17:36:52,893 | INFO     | -- intersect: -15436081097.262236
[2025-06-03 20:35:21] 2025-06-03 17:36:52,893 | INFO     | intersect: -15436081097.262236
[2025-06-03 20:35:21] 2025-06-03 17:36:52,893 | INFO     | chi2: 8.010173287397656
[2025-06-03 20:35:21] 2025-06-03 17:36:52,894 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 20:35:21] 2025-06-03 17:36:52,896 | INFO     | sum of deviations: 47117701495.999985
[2025-06-03 20:35:21] 2025-06-03 17:36:52,896 | INFO     | mean x: 1748965137.0
[2025-06-03 20:35:21] 2025-06-03 17:36:52,897 | INFO     | mean y: 2503167.9140271493
[2025-06-03 20:35:21] 2025-06-03 17:36:52,897 | INFO     | -- intersect: -24619245627.669285
[2025-06-03 20:35:21] 2025-06-03 17:36:52,897 | INFO     | intersect: -24619245627.669285
[2025-06-03 20:35:21] 2025-06-03 17:36:52,897 | INFO     | chi2: 7.306763353092411
[2025-06-03 20:35:21] 2025-06-03 17:36:52,897 | INFO     | current chi2=7.306763353092411 (change=8.781457142904934 %)
[2025-06-03 20:35:21] 2025-06-03 17:36:52,897 | INFO     | right removable region: 220
[2025-06-03 20:35:21] 2025-06-03 17:36:52,898 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 20:35:21] 2025-06-03 17:36:52,900 | INFO     | sum of deviations: -49331975814.99999
[2025-06-03 20:35:21] 2025-06-03 17:36:52,900 | INFO     | mean x: 1748965442.0
[2025-06-03 20:35:21] 2025-06-03 17:36:52,900 | INFO     | mean y: 2546234.633484163
[2025-06-03 20:35:21] 2025-06-03 17:36:52,900 | INFO     | -- intersect: 25781387081.30365
[2025-06-03 20:35:21] 2025-06-03 17:36:52,900 | INFO     | intersect: 25781387081.30365
[2025-06-03 20:35:21] 2025-06-03 17:36:52,901 | INFO     | chi2: 2.895135282449429
[2025-06-03 20:35:21] 2025-06-03 17:36:52,901 | INFO     | current chi2=2.895135282449429 (change=63.85677090151941 %)
[2025-06-03 20:35:21] 2025-06-03 17:36:52,901 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 20:35:21] 2025-06-03 17:36:52,903 | INFO     | sum of deviations: -94992803148.0
[2025-06-03 20:35:21] 2025-06-03 17:36:52,903 | INFO     | mean x: 1748965594.5
[2025-06-03 20:35:21] 2025-06-03 17:36:52,903 | INFO     | mean y: 2577436.9907407407
[2025-06-03 20:35:21] 2025-06-03 17:36:52,903 | INFO     | -- intersect: 53169509522.376175
[2025-06-03 20:35:21] 2025-06-03 17:36:52,903 | INFO     | intersect: 53169509522.376175
[2025-06-03 20:35:21] 2025-06-03 17:36:52,904 | INFO     | chi2: 1.0596447162303435
[2025-06-03 20:35:21] 2025-06-03 17:36:52,904 | INFO     | current chi2=1.0596447162303435 (change=63.39912947577942 %)
[2025-06-03 20:35:21] 2025-06-03 17:36:52,904 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 20:35:21] 2025-06-03 17:36:52,906 | INFO     | sum of deviations: -98053160277.00005
[2025-06-03 20:35:21] 2025-06-03 17:36:52,906 | INFO     | mean x: 1748965747.0
[2025-06-03 20:35:21] 2025-06-03 17:36:52,906 | INFO     | mean y: 2579584.440758294
[2025-06-03 20:35:21] 2025-06-03 17:36:52,906 | INFO     | -- intersect: 58877029818.10638
[2025-06-03 20:35:21] 2025-06-03 17:36:52,906 | INFO     | intersect: 58877029818.10638
[2025-06-03 20:35:21] 2025-06-03 17:36:52,907 | INFO     | chi2: 0.9876233374162756
[2025-06-03 20:35:21] 2025-06-03 17:36:52,907 | INFO     | current chi2=0.9876233374162756 (change=6.796747788285298 %)
[2025-06-03 20:35:21] 2025-06-03 17:36:52,907 | INFO     | left removable region: 30
[2025-06-03 20:35:21] 2025-06-03 17:36:52,907 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 20:35:21] 2025-06-03 17:36:52,909 | INFO     | sum of deviations: -66336997177.0
[2025-06-03 20:35:21] 2025-06-03 17:36:52,909 | INFO     | mean x: 1748966021.5
[2025-06-03 20:35:21] 2025-06-03 17:36:52,909 | INFO     | mean y: 2581238.852631579
[2025-06-03 20:35:21] 2025-06-03 17:36:52,909 | INFO     | -- intersect: 54554494213.12692
[2025-06-03 20:35:21] 2025-06-03 17:36:52,909 | INFO     | intersect: 54554494213.12692
[2025-06-03 20:35:21] 2025-06-03 17:36:52,910 | INFO     | chi2: 0.1820745323767784
[2025-06-03 20:35:21] 2025-06-03 17:36:52,910 | INFO     | -- intersect: 54554494213.12692
[2025-06-03 20:35:21] 2025-06-03 17:36:52,910 | INFO     | current memory leak: -31.19 B/s (using 190 data points, chi2=0.18)
[2025-06-03 20:35:21] 2025-06-03 17:36:52,911 | INFO     | ..............................
[2025-06-03 20:35:21] 2025-06-03 17:36:52,911 | INFO     | . Timing measurements:
[2025-06-03 20:35:21] 2025-06-03 17:36:52,912 | INFO     | . get job = 0 s
[2025-06-03 20:35:21] 2025-06-03 17:36:52,912 | INFO     | . initial setup = 4 s
[2025-06-03 20:35:21] 2025-06-03 17:36:52,912 | INFO     | . payload setup = 169 s
[2025-06-03 20:35:21] 2025-06-03 17:36:52,912 | INFO     | . stage-in = 0 s
[2025-06-03 20:35:21] 2025-06-03 17:36:52,912 | INFO     | . payload execution = 13909 s
[2025-06-03 20:35:21] 2025-06-03 17:36:52,912 | INFO     | . stage-out = 2 s
[2025-06-03 20:35:21] 2025-06-03 17:36:52,912 | INFO     | . log creation = 0 s
[2025-06-03 20:35:21] 2025-06-03 17:36:52,912 | INFO     | ..............................
[2025-06-03 20:35:21] 2025-06-03 17:36:53,039 | INFO     | 
[2025-06-03 20:35:21] 2025-06-03 17:36:53,039 | INFO     | job summary report
[2025-06-03 20:35:21] 2025-06-03 17:36:53,039 | INFO     | --------------------------------------------------
[2025-06-03 20:35:21] 2025-06-03 17:36:53,039 | INFO     | PanDA job id: 6677454900
[2025-06-03 20:35:21] 2025-06-03 17:36:53,039 | INFO     | task id: 45006595
[2025-06-03 20:35:21] 2025-06-03 17:36:53,039 | INFO     | errors: (none)
[2025-06-03 20:35:21] 2025-06-03 17:36:53,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:35:21] 2025-06-03 17:36:53,039 | INFO     | pilot state: finished 
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | transexitcode: 0
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | exeerrorcode: 0
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | exeerrordiag: 
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | exitcode: 0
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | exitmsg: OK
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | cpuconsumptiontime: 50714 s
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | nevents: 400
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | neventsw: 0
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | pid: 26305
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | pgrp: 26305
[2025-06-03 20:35:21] 2025-06-03 17:36:53,040 | INFO     | corecount: 8
[2025-06-03 20:35:21] 2025-06-03 17:36:53,041 | INFO     | event service: False
[2025-06-03 20:35:21] 2025-06-03 17:36:53,041 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 65: 2405506, 76: 2405534, 87: 2405590, 90: 2405824, 98: 2406132, 1
[2025-06-03 20:35:21] 2025-06-03 17:36:53,041 | INFO     | --------------------------------------------------
[2025-06-03 20:35:21] 2025-06-03 17:36:53,041 | INFO     | 
[2025-06-03 20:35:21] 2025-06-03 17:36:53,041 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 20:35:21] 2025-06-03 17:36:53,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,069 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:35:21] 2025-06-03 17:36:53,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:35:21] 2025-06-03 17:36:53,071 | INFO     | job 6677454900 has completed (purged errors)
[2025-06-03 20:35:21] 2025-06-03 17:36:53,071 | INFO     | overall cleanup function is called
[2025-06-03 20:35:21] 2025-06-03 17:36:54,075 | INFO     | --- collectZombieJob: --- 10, [26305]
[2025-06-03 20:35:21] 2025-06-03 17:36:54,075 | INFO     | zombie collector waiting for pid 26305
[2025-06-03 20:35:21] 2025-06-03 17:36:54,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:35:21] 2025-06-03 17:36:54,076 | INFO     | collected zombie processes
[2025-06-03 20:35:21] 2025-06-03 17:36:54,076 | INFO     | will attempt to kill all subprocesses of pid=26305
[2025-06-03 20:35:21] 2025-06-03 17:36:54,187 | INFO     | process IDs to be killed: [26305] (in reverse order)
[2025-06-03 20:35:21] 2025-06-03 17:36:54,647 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:35:21] 2025-06-03 17:36:54,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:35:21] 2025-06-03 17:36:54,652 | INFO     | did not find any defunct processes belonging to 26305
[2025-06-03 20:35:21] 2025-06-03 17:36:54,660 | INFO     | did not find any defunct processes belonging to 26305
[2025-06-03 20:35:21] 2025-06-03 17:36:54,660 | INFO     | ready for new job
[2025-06-03 20:35:21] 2025-06-03 17:36:54,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:35:21] 2025-06-03 17:36:54,665 | INFO     | **************************************
[2025-06-03 20:35:21] 2025-06-03 17:36:54,666 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:35:21] 2025-06-03 17:36:54,666 | INFO     | **************************************
[2025-06-03 20:35:21] 2025-06-03 17:36:54,666 | INFO     | 
[2025-06-03 20:35:21] 2025-06-03 17:36:54,666 | INFO     | pilot is running in a VM
[2025-06-03 20:35:21] 2025-06-03 17:36:54,667 | INFO     | architecture information:
[2025-06-03 20:35:21] 2025-06-03 17:36:54,667 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:35:21] 2025-06-03 17:36:54,743 | INFO     | cat /etc/os-release:
[2025-06-03 20:35:21] NAME="CentOS Linux"
[2025-06-03 20:35:21] VERSION="7 (Core)"
[2025-06-03 20:35:21] ID="centos"
[2025-06-03 20:35:21] ID_LIKE="rhel fedora"
[2025-06-03 20:35:21] VERSION_ID="7"
[2025-06-03 20:35:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:35:21] ANSI_COLOR="0;31"
[2025-06-03 20:35:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:35:21] HOME_URL="https://www.centos.org/"
[2025-06-03 20:35:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:35:21] 
[2025-06-03 20:35:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:35:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:35:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:35:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:35:21] 
[2025-06-03 20:35:21] 2025-06-03 17:36:54,744 | INFO     | **************************************
[2025-06-03 20:35:21] 2025-06-03 17:36:55,248 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 20:35:21] 2025-06-03 17:36:55,398 | INFO     | sufficient remaining disk space (496760782848 B)
[2025-06-03 20:35:21] 2025-06-03 17:36:55,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:35:21] 2025-06-03 17:36:55,398 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:35:21] 2025-06-03 17:36:55,398 | INFO     | update_server=False
[2025-06-03 20:35:21] 2025-06-03 17:36:55,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:35:21] 2025-06-03 17:36:55,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:35:21] 2025-06-03 17:36:55,579 | INFO     | all payload control threads have been joined
[2025-06-03 20:35:21] 2025-06-03 17:36:55,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:35:21] 2025-06-03 17:36:55,691 | INFO     | aborting loop
[2025-06-03 20:35:21] 2025-06-03 17:36:55,786 | INFO     | all job control threads have been joined
[2025-06-03 20:35:21] 2025-06-03 17:36:55,893 | INFO     | all data control threads have been joined
[2025-06-03 20:35:21] 2025-06-03 17:36:55,963 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:35:21] 2025-06-03 17:36:55,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:35:21] 2025-06-03 17:36:55,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:35:21] 2025-06-03 17:36:56,406 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:56,421 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:56,453 | INFO     | [job] validate thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:56,585 | INFO     | [payload] control thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:56,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:35:21] 2025-06-03 17:36:56,697 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:56,791 | INFO     | [job] control thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:56,899 | INFO     | [data] control thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:57,217 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:57,327 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:57,816 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:57,878 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:57,887 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:58,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:35:21] 2025-06-03 17:36:58,695 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:59,066 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:36:59,409 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:37:05,492 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:35:21] 2025-06-03 17:37:06,498 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:35:21] 2025-06-03 17:37:07,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365034919744)>', '<ExcThread(monitor, started 140364740544256)>']
[2025-06-03 20:35:21] 2025-06-03 17:37:08,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:35:21] 2025-06-03 17:37:08,032 | INFO     | [monitor] control thread has ended
[2025-06-03 20:35:21] 2025-06-03 17:37:12,458 | INFO     | all workflow threads have been joined
[2025-06-03 20:35:21] 2025-06-03 17:37:12,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:35:21] 2025-06-03 17:37:12,458 | INFO     | traces error code: 0
[2025-06-03 20:35:21] 2025-06-03 17:37:12,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:35:21] 2025-06-03 17:37:12,720 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:35:21] 2025-06-03 17:37:12,731 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:35:21] 2025-06-03 17:37:12,766 [wrapper] pilotpid: 19660
[2025-06-03 20:35:21] 2025-06-03 17:37:12,878 [wrapper] Pilot exit status: 0
[2025-06-03 20:35:21] 2025-06-03 17:37:12,990 [wrapper] pandaids: 6677454900
[2025-06-03 20:35:21] 2025-06-03 17:37:13,078 [wrapper] cleanup supervisor_pilot 21398 19661
[2025-06-03 20:35:21] 2025-06-03 17:37:13,095 [wrapper] Test setup, not cleaning
[2025-06-03 20:35:21] 2025-06-03 17:37:13,100 [wrapper] apfmon messages muted
[2025-06-03 20:35:21] 2025-06-03 17:37:13,103 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:35:21] 2025-06-03 17:37:13,107 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:35:21]  *** Error codes and diagnostics ***
[2025-06-03 20:35:21]     "exeErrorCode": 0,
[2025-06-03 20:35:21]     "exeErrorDiag": "",
[2025-06-03 20:35:21]     "pilotErrorCode": 0,
[2025-06-03 20:35:21]     "pilotErrorDiag": "",
[2025-06-03 20:35:21]  *** Listing of results directory ***
[2025-06-03 20:35:21] total 395556
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc    495897 Jun  3 04:50 pilot3.tar.gz
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc      5111 Jun  3 05:27 queuedata.json
[2025-06-03 20:35:21] -rwx------. 1 boinc boinc     37140 Jun  3 05:28 runpilot2-wrapper.sh
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:35:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:35 run_atlas
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:35 job.xml
[2025-06-03 20:35:21] -rw-r--r--. 2 boinc boinc 216983060 Jun  3 15:35 EVNT.45006593._000731.pool.root.1
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc      6391 Jun  3 15:35 init_data.xml
[2025-06-03 20:35:21] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:35 shared
[2025-06-03 20:35:21] -rw-r--r--. 2 boinc boinc    508881 Jun  3 15:35 input.tar.gz
[2025-06-03 20:35:21] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:35 start_atlas.sh
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:35 boinc_lockfile
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc      2524 Jun  3 15:35 pandaJob.out
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc    982724 Jun  3 15:38 agis_schedconf.cvmfs.json
[2025-06-03 20:35:21] drwx------. 4 boinc boinc      4096 Jun  3 15:38 pilot3
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc 181036816 Jun  3 19:35 HITS.45006595._018266.pool.root.1
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc       531 Jun  3 19:35 boinc_task_state.xml
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc        95 Jun  3 19:36 pilot_heartbeat.json
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc      1018 Jun  3 19:36 memory_monitor_summary.json
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc   1603667 Jun  3 19:36 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc    386420 Jun  3 19:36 log.45006595._018266.job.log.tgz.1
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc      7695 Jun  3 19:36 heartbeat.json
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc      4488 Jun  3 19:37 pilotlog.txt
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc   1218057 Jun  3 19:37 log.45006595._018266.job.log.1
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc       357 Jun  3 19:37 output.list
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:37 runtime_log
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc   1628160 Jun  3 19:37 result.tar.gz
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc      8659 Jun  3 19:37 runtime_log.err
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc       656 Jun  3 19:37 EuWKDm3UXg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVFXKDmaFABym.diag
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:35 boinc_mmap_file
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:35 wrapper_checkpoint.txt
[2025-06-03 20:35:21] -rw-r--r--. 1 boinc boinc     20459 Jun  3 20:35 stderr.txt
[2025-06-03 20:35:21] HITS file was successfully produced:
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc 181036816 Jun  3 19:35 shared/HITS.pool.root.1
[2025-06-03 20:35:21]  *** Contents of shared directory: ***
[2025-06-03 20:35:21] total 390804
[2025-06-03 20:35:21] -rw-r--r--. 2 boinc boinc 216983060 Jun  3 15:35 ATLAS.root_0
[2025-06-03 20:35:21] -rw-r--r--. 2 boinc boinc    508881 Jun  3 15:35 input.tar.gz
[2025-06-03 20:35:21] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:35 start_atlas.sh
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc 181036816 Jun  3 19:35 HITS.pool.root.1
[2025-06-03 20:35:21] -rw-------. 1 boinc boinc   1628160 Jun  3 19:37 result.tar.gz
20:35:23 (11674): run_atlas exited; CPU time 50903.366446
20:35:23 (11674): called boinc_finish(0)

</stderr_txt>
]]>

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