Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:09:57 (9109): wrapper (7.7.26015): starting
14:09:57 (9109): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:09:58] Arguments: --nthreads 8
[2025-06-03 14:09:58] Threads: 8
[2025-06-03 14:09:58] Checking for CVMFS
[2025-06-03 14:09:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:09:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:09:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:09:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:09:58] 2.11.2.0 5342 31765 93148 146741 3 114 18581204 25165825 4353 130560 0 16024032 99.811 18285341 2127 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 14:09:58] CVMFS is ok
[2025-06-03 14:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:09:58] Checking for apptainer binary...
[2025-06-03 14:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:09:58] Running /usr/bin/apptainer --version
[2025-06-03 14:09:58] apptainer version 1.3.2-1.el7
[2025-06-03 14:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:10:00] cg-vwn390.simple-grid.lan
[2025-06-03 14:10:00] apptainer works
[2025-06-03 14:10:00] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:10:00] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:10:01] Starting ATLAS job with PandaID=6677454886
[2025-06-03 14:10:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:01:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:01:25] 2025-06-03 15:57:55,174 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:01:25] 2025-06-03 15:57:55,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:01:25] 2025-06-03 15:57:55,174 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:01:25] 2025-06-03 15:57:55,174 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:01:25] 2025-06-03 15:57:55,185 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:01:25] 2025-06-03 15:57:55,185 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,187 | INFO     | sum of deviations: -42404519293.99999
[2025-06-03 18:01:25] 2025-06-03 15:57:55,187 | INFO     | mean x: 1748959431.0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,187 | INFO     | mean y: 2538189.3438914027
[2025-06-03 18:01:25] 2025-06-03 15:57:55,187 | INFO     | -- intersect: 22161301932.364964
[2025-06-03 18:01:25] 2025-06-03 15:57:55,187 | INFO     | intersect: 22161301932.364964
[2025-06-03 18:01:25] 2025-06-03 15:57:55,188 | INFO     | chi2: 2.9485638395680245
[2025-06-03 18:01:25] 2025-06-03 15:57:55,188 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,190 | INFO     | sum of deviations: -26130156511.499996
[2025-06-03 18:01:25] 2025-06-03 15:57:55,190 | INFO     | mean x: 1748959278.5
[2025-06-03 18:01:25] 2025-06-03 15:57:55,190 | INFO     | mean y: 2549182.0046296297
[2025-06-03 18:01:25] 2025-06-03 15:57:55,190 | INFO     | -- intersect: 14627396471.316723
[2025-06-03 18:01:25] 2025-06-03 15:57:55,190 | INFO     | intersect: 14627396471.316723
[2025-06-03 18:01:25] 2025-06-03 15:57:55,191 | INFO     | chi2: 2.1904491853029695
[2025-06-03 18:01:25] 2025-06-03 15:57:55,191 | INFO     | current chi2=2.1904491853029695 (change=25.71131898491035 %)
[2025-06-03 18:01:25] 2025-06-03 15:57:55,191 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,193 | INFO     | sum of deviations: -24684601051.000004
[2025-06-03 18:01:25] 2025-06-03 15:57:55,193 | INFO     | mean x: 1748959126.0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,193 | INFO     | mean y: 2550221.924170616
[2025-06-03 18:01:25] 2025-06-03 15:57:55,193 | INFO     | -- intersect: 14823967607.45548
[2025-06-03 18:01:25] 2025-06-03 15:57:55,194 | INFO     | intersect: 14823967607.45548
[2025-06-03 18:01:25] 2025-06-03 15:57:55,194 | INFO     | chi2: 2.1896259290223155
[2025-06-03 18:01:25] 2025-06-03 15:57:55,194 | INFO     | current chi2=2.1896259290223155 (change=0.037583902250632774 %)
[2025-06-03 18:01:25] 2025-06-03 15:57:55,194 | INFO     | right removable region: 210
[2025-06-03 18:01:25] 2025-06-03 15:57:55,195 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,196 | INFO     | sum of deviations: -86061255433.00003
[2025-06-03 18:01:25] 2025-06-03 15:57:55,197 | INFO     | mean x: 1748959583.5
[2025-06-03 18:01:25] 2025-06-03 15:57:55,197 | INFO     | mean y: 2567943.222222222
[2025-06-03 18:01:25] 2025-06-03 15:57:55,197 | INFO     | -- intersect: 48170397981.76065
[2025-06-03 18:01:25] 2025-06-03 15:57:55,197 | INFO     | intersect: 48170397981.76065
[2025-06-03 18:01:25] 2025-06-03 15:57:55,197 | INFO     | chi2: 1.0234290135076738
[2025-06-03 18:01:25] 2025-06-03 15:57:55,198 | INFO     | current chi2=1.0234290135076738 (change=65.29059334670502 %)
[2025-06-03 18:01:25] 2025-06-03 15:57:55,198 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,207 | INFO     | sum of deviations: -87506572597.00002
[2025-06-03 18:01:25] 2025-06-03 15:57:55,207 | INFO     | mean x: 1748959736.0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,207 | INFO     | mean y: 2568946.4549763035
[2025-06-03 18:01:25] 2025-06-03 15:57:55,207 | INFO     | -- intersect: 52544308880.35328
[2025-06-03 18:01:25] 2025-06-03 15:57:55,208 | INFO     | intersect: 52544308880.35328
[2025-06-03 18:01:25] 2025-06-03 15:57:55,208 | INFO     | chi2: 0.9829705625771107
[2025-06-03 18:01:25] 2025-06-03 15:57:55,208 | INFO     | current chi2=0.9829705625771107 (change=3.9532249327089986 %)
[2025-06-03 18:01:25] 2025-06-03 15:57:55,208 | INFO     | left removable region: 20
[2025-06-03 18:01:25] 2025-06-03 15:57:55,209 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 18:01:25] 2025-06-03 15:57:55,210 | INFO     | sum of deviations: -58780035783.99999
[2025-06-03 18:01:25] 2025-06-03 15:57:55,210 | INFO     | mean x: 1748959705.5
[2025-06-03 18:01:25] 2025-06-03 15:57:55,210 | INFO     | mean y: 2575433.347368421
[2025-06-03 18:01:25] 2025-06-03 15:57:55,211 | INFO     | -- intersect: 48339882718.61016
[2025-06-03 18:01:25] 2025-06-03 15:57:55,211 | INFO     | intersect: 48339882718.61016
[2025-06-03 18:01:25] 2025-06-03 15:57:55,211 | INFO     | chi2: 0.18525976300023916
[2025-06-03 18:01:25] 2025-06-03 15:57:55,211 | INFO     | -- intersect: 48339882718.61016
[2025-06-03 18:01:25] 2025-06-03 15:57:55,211 | INFO     | current memory leak: -27.64 B/s (using 190 data points, chi2=0.19)
[2025-06-03 18:01:25] 2025-06-03 15:57:55,212 | INFO     | ..............................
[2025-06-03 18:01:25] 2025-06-03 15:57:55,212 | INFO     | . Timing measurements:
[2025-06-03 18:01:25] 2025-06-03 15:57:55,213 | INFO     | . get job = 0 s
[2025-06-03 18:01:25] 2025-06-03 15:57:55,213 | INFO     | . initial setup = 7 s
[2025-06-03 18:01:25] 2025-06-03 15:57:55,213 | INFO     | . payload setup = 21 s
[2025-06-03 18:01:25] 2025-06-03 15:57:55,213 | INFO     | . stage-in = 0 s
[2025-06-03 18:01:25] 2025-06-03 15:57:55,213 | INFO     | . payload execution = 13481 s
[2025-06-03 18:01:25] 2025-06-03 15:57:55,213 | INFO     | . stage-out = 3 s
[2025-06-03 18:01:25] 2025-06-03 15:57:55,213 | INFO     | . log creation = 1 s
[2025-06-03 18:01:25] 2025-06-03 15:57:55,213 | INFO     | ..............................
[2025-06-03 18:01:25] 2025-06-03 15:57:55,388 | INFO     | 
[2025-06-03 18:01:25] 2025-06-03 15:57:55,389 | INFO     | job summary report
[2025-06-03 18:01:25] 2025-06-03 15:57:55,389 | INFO     | --------------------------------------------------
[2025-06-03 18:01:25] 2025-06-03 15:57:55,389 | INFO     | PanDA job id: 6677454886
[2025-06-03 18:01:25] 2025-06-03 15:57:55,389 | INFO     | task id: 45006595
[2025-06-03 18:01:25] 2025-06-03 15:57:55,389 | INFO     | errors: (none)
[2025-06-03 18:01:25] 2025-06-03 15:57:55,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:01:25] 2025-06-03 15:57:55,389 | INFO     | pilot state: finished 
[2025-06-03 18:01:25] 2025-06-03 15:57:55,390 | INFO     | transexitcode: 0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,390 | INFO     | exeerrorcode: 0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,390 | INFO     | exeerrordiag: 
[2025-06-03 18:01:25] 2025-06-03 15:57:55,390 | INFO     | exitcode: 0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,390 | INFO     | exitmsg: OK
[2025-06-03 18:01:25] 2025-06-03 15:57:55,390 | INFO     | cpuconsumptiontime: 49380 s
[2025-06-03 18:01:25] 2025-06-03 15:57:55,390 | INFO     | nevents: 400
[2025-06-03 18:01:25] 2025-06-03 15:57:55,390 | INFO     | neventsw: 0
[2025-06-03 18:01:25] 2025-06-03 15:57:55,390 | INFO     | pid: 23424
[2025-06-03 18:01:25] 2025-06-03 15:57:55,391 | INFO     | pgrp: 23424
[2025-06-03 18:01:25] 2025-06-03 15:57:55,391 | INFO     | corecount: 8
[2025-06-03 18:01:25] 2025-06-03 15:57:55,391 | INFO     | event service: False
[2025-06-03 18:01:25] 2025-06-03 15:57:55,391 | INFO     | sizes: {0: 2405131, 1: 2405131, 12: 2405393, 22: 2405393, 13507: 2434991, 13512: 2444116, 13602: 2444230}
[2025-06-03 18:01:25] 2025-06-03 15:57:55,391 | INFO     | --------------------------------------------------
[2025-06-03 18:01:25] 2025-06-03 15:57:55,391 | INFO     | 
[2025-06-03 18:01:25] 2025-06-03 15:57:55,391 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 18:01:25] 2025-06-03 15:57:55,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,778 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,780 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:01:25] 2025-06-03 15:57:55,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,780 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:01:25] 2025-06-03 15:57:55,780 | INFO     | job 6677454886 has completed (purged errors)
[2025-06-03 18:01:25] 2025-06-03 15:57:55,781 | INFO     | overall cleanup function is called
[2025-06-03 18:01:25] 2025-06-03 15:57:56,789 | INFO     | --- collectZombieJob: --- 10, [23424]
[2025-06-03 18:01:25] 2025-06-03 15:57:56,790 | INFO     | zombie collector waiting for pid 23424
[2025-06-03 18:01:25] 2025-06-03 15:57:56,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:01:25] 2025-06-03 15:57:56,790 | INFO     | collected zombie processes
[2025-06-03 18:01:25] 2025-06-03 15:57:56,790 | INFO     | will attempt to kill all subprocesses of pid=23424
[2025-06-03 18:01:25] 2025-06-03 15:57:56,925 | INFO     | process IDs to be killed: [23424] (in reverse order)
[2025-06-03 18:01:25] 2025-06-03 15:57:57,522 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:01:25] 2025-06-03 15:57:57,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:01:25] 2025-06-03 15:57:57,526 | INFO     | did not find any defunct processes belonging to 23424
[2025-06-03 18:01:25] 2025-06-03 15:57:57,534 | INFO     | did not find any defunct processes belonging to 23424
[2025-06-03 18:01:25] 2025-06-03 15:57:57,534 | INFO     | ready for new job
[2025-06-03 18:01:25] 2025-06-03 15:57:57,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:01:25] 2025-06-03 15:57:57,536 | INFO     | **************************************
[2025-06-03 18:01:25] 2025-06-03 15:57:57,536 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:01:25] 2025-06-03 15:57:57,536 | INFO     | **************************************
[2025-06-03 18:01:25] 2025-06-03 15:57:57,537 | INFO     | 
[2025-06-03 18:01:25] 2025-06-03 15:57:57,537 | INFO     | pilot is running in a VM
[2025-06-03 18:01:25] 2025-06-03 15:57:57,537 | INFO     | architecture information:
[2025-06-03 18:01:25] 2025-06-03 15:57:57,541 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:01:25] 2025-06-03 15:57:57,765 | INFO     | cat /etc/os-release:
[2025-06-03 18:01:25] NAME="CentOS Linux"
[2025-06-03 18:01:25] VERSION="7 (Core)"
[2025-06-03 18:01:25] ID="centos"
[2025-06-03 18:01:25] ID_LIKE="rhel fedora"
[2025-06-03 18:01:25] VERSION_ID="7"
[2025-06-03 18:01:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:01:25] ANSI_COLOR="0;31"
[2025-06-03 18:01:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:01:25] HOME_URL="https://www.centos.org/"
[2025-06-03 18:01:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:01:25] 
[2025-06-03 18:01:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:01:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:01:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:01:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:01:25] 
[2025-06-03 18:01:25] 2025-06-03 15:57:57,765 | INFO     | **************************************
[2025-06-03 18:01:25] 2025-06-03 15:57:58,269 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 18:01:25] 2025-06-03 15:57:58,502 | INFO     | sufficient remaining disk space (496587767808 B)
[2025-06-03 18:01:25] 2025-06-03 15:57:58,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:01:25] 2025-06-03 15:57:58,503 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:01:25] 2025-06-03 15:57:58,503 | INFO     | update_server=False
[2025-06-03 18:01:25] 2025-06-03 15:57:58,503 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:01:25] 2025-06-03 15:57:58,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:01:25] 2025-06-03 15:57:58,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:01:25] 2025-06-03 15:57:58,505 | INFO     | aborting loop
[2025-06-03 18:01:25] 2025-06-03 15:57:58,647 | INFO     | all data control threads have been joined
[2025-06-03 18:01:25] 2025-06-03 15:57:58,723 | INFO     | PID=12819 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 18:01:25] 2025-06-03 15:57:58,723 | INFO     | .. there are 9 such processes running
[2025-06-03 18:01:25] 2025-06-03 15:57:58,723 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:01:25] 2025-06-03 15:57:58,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:01:25] 2025-06-03 15:57:58,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:01:25] 2025-06-03 15:57:59,365 | INFO     | all job control threads have been joined
[2025-06-03 18:01:25] 2025-06-03 15:57:59,509 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:57:59,511 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:57:59,564 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:57:59,654 | INFO     | [data] control thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:57:59,730 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:57:59,873 | INFO     | all payload control threads have been joined
[2025-06-03 18:01:25] 2025-06-03 15:58:00,230 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:00,358 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:00,371 | INFO     | [job] control thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:00,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:01:25] 2025-06-03 15:58:00,455 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:00,511 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:00,641 | INFO     | [job] validate thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:00,878 | INFO     | [payload] control thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:00,975 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:00,980 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:01,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:01:25] 2025-06-03 15:58:01,407 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:05,092 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:01:25] 2025-06-03 15:58:07,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140384064743232)>', '<ExcThread(monitor, started 140383447131904)>']
[2025-06-03 18:01:25] 2025-06-03 15:58:07,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:01:25] 2025-06-03 15:58:07,777 | INFO     | [monitor] control thread has ended
[2025-06-03 18:01:25] 2025-06-03 15:58:12,129 | INFO     | all workflow threads have been joined
[2025-06-03 18:01:25] 2025-06-03 15:58:12,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:01:25] 2025-06-03 15:58:12,130 | INFO     | traces error code: 0
[2025-06-03 18:01:25] 2025-06-03 15:58:12,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:01:25] 2025-06-03 15:58:12,365 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:01:25] 2025-06-03 15:58:12,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:01:25] 2025-06-03 15:58:12,380 [wrapper] pilotpid: 12819
[2025-06-03 18:01:25] 2025-06-03 15:58:12,393 [wrapper] Pilot exit status: 0
[2025-06-03 18:01:25] 2025-06-03 15:58:12,856 [wrapper] pandaids: 6677454886
[2025-06-03 18:01:25] 2025-06-03 15:58:13,930 [wrapper] cleanup supervisor_pilot 11294 12820
[2025-06-03 18:01:25] 2025-06-03 15:58:14,023 [wrapper] Test setup, not cleaning
[2025-06-03 18:01:25] 2025-06-03 15:58:14,154 [wrapper] apfmon messages muted
[2025-06-03 18:01:25] 2025-06-03 15:58:14,265 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:01:25] 2025-06-03 15:58:14,282 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:01:25]  *** Error codes and diagnostics ***
[2025-06-03 18:01:25]     "exeErrorCode": 0,
[2025-06-03 18:01:25]     "exeErrorDiag": "",
[2025-06-03 18:01:25]     "pilotErrorCode": 0,
[2025-06-03 18:01:25]     "pilotErrorDiag": "",
[2025-06-03 18:01:25]  *** Listing of results directory ***
[2025-06-03 18:01:25] total 393732
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc    495897 Jun  3 04:50 pilot3.tar.gz
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc      5111 Jun  3 05:22 queuedata.json
[2025-06-03 18:01:25] -rwx------. 1 boinc boinc     37140 Jun  3 05:24 runpilot2-wrapper.sh
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:01:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:09 run_atlas
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:09 job.xml
[2025-06-03 18:01:25] -rw-r--r--. 2 boinc boinc 214379752 Jun  3 14:09 EVNT.45006593._000730.pool.root.1
[2025-06-03 18:01:25] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:09 start_atlas.sh
[2025-06-03 18:01:25] drwxrwx--x. 2 boinc boinc        68 Jun  3 14:09 shared
[2025-06-03 18:01:25] -rw-r--r--. 2 boinc boinc    508883 Jun  3 14:09 input.tar.gz
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc      6392 Jun  3 14:09 init_data.xml
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:09 boinc_lockfile
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc      2523 Jun  3 14:10 pandaJob.out
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc    982666 Jun  3 14:10 agis_schedconf.cvmfs.json
[2025-06-03 18:01:25] drwx------. 4 boinc boinc      4096 Jun  3 14:10 pilot3
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc 181828900 Jun  3 17:55 HITS.45006595._018252.pool.root.1
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc       531 Jun  3 17:55 boinc_task_state.xml
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc      1021 Jun  3 17:56 memory_monitor_summary.json
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc   1603667 Jun  3 17:56 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc    396489 Jun  3 17:56 log.45006595._018252.job.log.tgz.1
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc        95 Jun  3 17:57 pilot_heartbeat.json
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc      7696 Jun  3 17:57 heartbeat.json
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc      4808 Jun  3 17:58 pilotlog.txt
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc   1183882 Jun  3 17:58 log.45006595._018252.job.log.1
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc       357 Jun  3 17:58 output.list
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:58 runtime_log
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc   1597440 Jun  3 17:58 result.tar.gz
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc      8659 Jun  3 17:58 runtime_log.err
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc       656 Jun  3 17:58 f60MDmORXg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUlhKDmKMTRIo.diag
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:01 boinc_mmap_file
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:01 wrapper_checkpoint.txt
[2025-06-03 18:01:25] -rw-r--r--. 1 boinc boinc     20539 Jun  3 18:01 stderr.txt
[2025-06-03 18:01:25] HITS file was successfully produced:
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc 181828900 Jun  3 17:55 shared/HITS.pool.root.1
[2025-06-03 18:01:25]  *** Contents of shared directory: ***
[2025-06-03 18:01:25] total 389000
[2025-06-03 18:01:25] -rw-r--r--. 2 boinc boinc 214379752 Jun  3 14:09 ATLAS.root_0
[2025-06-03 18:01:25] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:09 start_atlas.sh
[2025-06-03 18:01:25] -rw-r--r--. 2 boinc boinc    508883 Jun  3 14:09 input.tar.gz
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc 181828900 Jun  3 17:55 HITS.pool.root.1
[2025-06-03 18:01:25] -rw-------. 1 boinc boinc   1597440 Jun  3 17:58 result.tar.gz
18:01:27 (9109): run_atlas exited; CPU time 49553.324282
18:01:27 (9109): called boinc_finish(0)

</stderr_txt>
]]>

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