Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:51:06 (7961): wrapper (7.7.26015): starting
17:51:06 (7961): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:51:06] Arguments: --nthreads 8
[2025-06-03 17:51:06] Threads: 8
[2025-06-03 17:51:06] Checking for CVMFS
[2025-06-03 17:51:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:51:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:51:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:51:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:51:07] 2.11.2.0 19526 32210 106760 146746 0 114 13952688 25165825 3979 130560 0 16765142 99.855 17174346 2090 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:51:07] CVMFS is ok
[2025-06-03 17:51:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:51:07] Checking for apptainer binary...
[2025-06-03 17:51:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:51:07] Running /usr/bin/apptainer --version
[2025-06-03 17:51:07] apptainer version 1.3.2-1.el7
[2025-06-03 17:51:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:51:08] cg-vwn225.simple-grid.lan
[2025-06-03 17:51:08] apptainer works
[2025-06-03 17:51:08] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:51:08] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:51:08] Starting ATLAS job with PandaID=6677454926
[2025-06-03 17:51:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:52:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:52:46] 2025-06-03 19:52:32,466 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6677454926/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:52:46] 2025-06-03 19:52:32,467 | INFO     | extracted standard info from prmon json
[2025-06-03 21:52:46] 2025-06-03 19:52:32,467 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:52:46] 2025-06-03 19:52:32,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:52:46] 2025-06-03 19:52:32,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:52:46] 2025-06-03 19:52:32,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:52:46] 2025-06-03 19:52:32,473 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:52:46] 2025-06-03 19:52:32,473 | INFO     | sum of square deviations: 4075741535.0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,475 | INFO     | sum of deviations: -19920354712.000004
[2025-06-03 21:52:46] 2025-06-03 19:52:32,476 | INFO     | mean x: 1748973120.5
[2025-06-03 21:52:46] 2025-06-03 19:52:32,476 | INFO     | mean y: 2496513.915254237
[2025-06-03 21:52:46] 2025-06-03 19:52:32,476 | INFO     | -- intersect: 8550674714.845635
[2025-06-03 21:52:46] 2025-06-03 19:52:32,476 | INFO     | intersect: 8550674714.845635
[2025-06-03 21:52:46] 2025-06-03 19:52:32,476 | INFO     | chi2: 2.8018319292169256
[2025-06-03 21:52:46] 2025-06-03 19:52:32,477 | INFO     | sum of square deviations: 3822136780.0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,479 | INFO     | sum of deviations: -3742586863.00001
[2025-06-03 21:52:46] 2025-06-03 19:52:32,479 | INFO     | mean x: 1748972968.0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,479 | INFO     | mean y: 2506081.285714286
[2025-06-03 21:52:46] 2025-06-03 19:52:32,479 | INFO     | -- intersect: 1715077773.651715
[2025-06-03 21:52:46] 2025-06-03 19:52:32,479 | INFO     | intersect: 1715077773.651715
[2025-06-03 21:52:46] 2025-06-03 19:52:32,480 | INFO     | chi2: 2.0366567464890233
[2025-06-03 21:52:46] 2025-06-03 19:52:32,480 | INFO     | current chi2=2.0366567464890233 (change=27.309817364446925 %)
[2025-06-03 21:52:46] 2025-06-03 19:52:32,480 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 21:52:46] 2025-06-03 19:52:32,482 | INFO     | sum of deviations: -3454958473.500006
[2025-06-03 21:52:46] 2025-06-03 19:52:32,482 | INFO     | mean x: 1748972815.5
[2025-06-03 21:52:46] 2025-06-03 19:52:32,482 | INFO     | mean y: 2506262.0398230087
[2025-06-03 21:52:46] 2025-06-03 19:52:32,482 | INFO     | -- intersect: 1690732526.9156117
[2025-06-03 21:52:46] 2025-06-03 19:52:32,482 | INFO     | intersect: 1690732526.9156117
[2025-06-03 21:52:46] 2025-06-03 19:52:32,483 | INFO     | chi2: 2.0367519240743164
[2025-06-03 21:52:46] 2025-06-03 19:52:32,483 | INFO     | current chi2=2.0367519240743164 (change=-0.004673226622854809 %)
[2025-06-03 21:52:46] 2025-06-03 19:52:32,483 | INFO     | right removable region: 225
[2025-06-03 21:52:46] 2025-06-03 19:52:32,483 | INFO     | sum of square deviations: 3822136780.0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,485 | INFO     | sum of deviations: -64085716171.000015
[2025-06-03 21:52:46] 2025-06-03 19:52:32,486 | INFO     | mean x: 1748973273.0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,486 | INFO     | mean y: 2522875.4242424243
[2025-06-03 21:52:46] 2025-06-03 19:52:32,486 | INFO     | -- intersect: 29327534306.37123
[2025-06-03 21:52:46] 2025-06-03 19:52:32,486 | INFO     | intersect: 29327534306.37123
[2025-06-03 21:52:46] 2025-06-03 19:52:32,486 | INFO     | chi2: 1.0062068748305113
[2025-06-03 21:52:46] 2025-06-03 19:52:32,486 | INFO     | current chi2=1.0062068748305113 (change=64.08753628874047 %)
[2025-06-03 21:52:46] 2025-06-03 19:52:32,487 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 21:52:46] 2025-06-03 19:52:32,489 | INFO     | sum of deviations: -63871690412.0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,489 | INFO     | mean x: 1748973425.5
[2025-06-03 21:52:46] 2025-06-03 19:52:32,489 | INFO     | mean y: 2522708.2477876106
[2025-06-03 21:52:46] 2025-06-03 19:52:32,489 | INFO     | -- intersect: 31212710550.188072
[2025-06-03 21:52:46] 2025-06-03 19:52:32,489 | INFO     | intersect: 31212710550.188072
[2025-06-03 21:52:46] 2025-06-03 19:52:32,490 | INFO     | chi2: 0.9859949346443957
[2025-06-03 21:52:46] 2025-06-03 19:52:32,490 | INFO     | current chi2=0.9859949346443957 (change=2.0087261070960354 %)
[2025-06-03 21:52:46] 2025-06-03 19:52:32,490 | INFO     | left removable region: 20
[2025-06-03 21:52:46] 2025-06-03 19:52:32,491 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,492 | INFO     | sum of deviations: -32792110379.999996
[2025-06-03 21:52:46] 2025-06-03 19:52:32,492 | INFO     | mean x: 1748973395.0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,493 | INFO     | mean y: 2524432.043902439
[2025-06-03 21:52:46] 2025-06-03 19:52:32,493 | INFO     | -- intersect: 21472072243.34072
[2025-06-03 21:52:46] 2025-06-03 19:52:32,493 | INFO     | intersect: 21472072243.34072
[2025-06-03 21:52:46] 2025-06-03 19:52:32,493 | INFO     | chi2: 0.17014118082005286
[2025-06-03 21:52:46] 2025-06-03 19:52:32,493 | INFO     | -- intersect: 21472072243.34072
[2025-06-03 21:52:46] 2025-06-03 19:52:32,493 | INFO     | current memory leak: -12.28 B/s (using 205 data points, chi2=0.17)
[2025-06-03 21:52:46] 2025-06-03 19:52:32,494 | INFO     | ..............................
[2025-06-03 21:52:46] 2025-06-03 19:52:32,494 | INFO     | . Timing measurements:
[2025-06-03 21:52:46] 2025-06-03 19:52:32,494 | INFO     | . get job = 0 s
[2025-06-03 21:52:46] 2025-06-03 19:52:32,495 | INFO     | . initial setup = 2 s
[2025-06-03 21:52:46] 2025-06-03 19:52:32,495 | INFO     | . payload setup = 13 s
[2025-06-03 21:52:46] 2025-06-03 19:52:32,495 | INFO     | . stage-in = 0 s
[2025-06-03 21:52:46] 2025-06-03 19:52:32,495 | INFO     | . payload execution = 14383 s
[2025-06-03 21:52:46] 2025-06-03 19:52:32,495 | INFO     | . stage-out = 1 s
[2025-06-03 21:52:46] 2025-06-03 19:52:32,495 | INFO     | . log creation = 0 s
[2025-06-03 21:52:46] 2025-06-03 19:52:32,495 | INFO     | ..............................
[2025-06-03 21:52:46] 2025-06-03 19:52:32,896 | INFO     | 
[2025-06-03 21:52:46] 2025-06-03 19:52:32,896 | INFO     | job summary report
[2025-06-03 21:52:46] 2025-06-03 19:52:32,896 | INFO     | --------------------------------------------------
[2025-06-03 21:52:46] 2025-06-03 19:52:32,896 | INFO     | PanDA job id: 6677454926
[2025-06-03 21:52:46] 2025-06-03 19:52:32,896 | INFO     | task id: 45006595
[2025-06-03 21:52:46] 2025-06-03 19:52:32,896 | INFO     | errors: (none)
[2025-06-03 21:52:46] 2025-06-03 19:52:32,896 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | pilot state: finished 
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | transexitcode: 0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | exeerrorcode: 0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | exeerrordiag: 
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | exitcode: 0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | exitmsg: OK
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | cpuconsumptiontime: 52602 s
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | nevents: 400
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | neventsw: 0
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | pid: 22273
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | pgrp: 22273
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | corecount: 8
[2025-06-03 21:52:46] 2025-06-03 19:52:32,897 | INFO     | event service: False
[2025-06-03 21:52:46] 2025-06-03 19:52:32,898 | INFO     | sizes: {0: 2404955, 1: 2405210, 2: 2405210, 10: 2405444, 12: 2405472, 14401: 2435470, 14403: 2444411, 14404: 2444467, 14439: 2444637}
[2025-06-03 21:52:46] 2025-06-03 19:52:32,898 | INFO     | --------------------------------------------------
[2025-06-03 21:52:46] 2025-06-03 19:52:32,898 | INFO     | 
[2025-06-03 21:52:46] 2025-06-03 19:52:32,898 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 21:52:46] 2025-06-03 19:52:33,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:52:46] 2025-06-03 19:52:33,030 | INFO     | job 6677454926 has completed (purged errors)
[2025-06-03 21:52:46] 2025-06-03 19:52:33,031 | INFO     | overall cleanup function is called
[2025-06-03 21:52:46] 2025-06-03 19:52:34,040 | INFO     | --- collectZombieJob: --- 10, [22273]
[2025-06-03 21:52:46] 2025-06-03 19:52:34,040 | INFO     | zombie collector waiting for pid 22273
[2025-06-03 21:52:46] 2025-06-03 19:52:34,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:52:46] 2025-06-03 19:52:34,040 | INFO     | collected zombie processes
[2025-06-03 21:52:46] 2025-06-03 19:52:34,040 | INFO     | will attempt to kill all subprocesses of pid=22273
[2025-06-03 21:52:46] 2025-06-03 19:52:34,134 | INFO     | process IDs to be killed: [22273] (in reverse order)
[2025-06-03 21:52:46] 2025-06-03 19:52:34,223 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:52:46] 2025-06-03 19:52:34,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:52:46] 2025-06-03 19:52:34,227 | INFO     | did not find any defunct processes belonging to 22273
[2025-06-03 21:52:46] 2025-06-03 19:52:34,230 | INFO     | did not find any defunct processes belonging to 22273
[2025-06-03 21:52:46] 2025-06-03 19:52:34,231 | INFO     | ready for new job
[2025-06-03 21:52:46] 2025-06-03 19:52:34,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:52:46] 2025-06-03 19:52:34,234 | INFO     | **************************************
[2025-06-03 21:52:46] 2025-06-03 19:52:34,234 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:52:46] 2025-06-03 19:52:34,234 | INFO     | **************************************
[2025-06-03 21:52:46] 2025-06-03 19:52:34,234 | INFO     | 
[2025-06-03 21:52:46] 2025-06-03 19:52:34,234 | INFO     | pilot is running in a VM
[2025-06-03 21:52:46] 2025-06-03 19:52:34,235 | INFO     | architecture information:
[2025-06-03 21:52:46] 2025-06-03 19:52:34,235 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:52:46] 2025-06-03 19:52:34,264 | INFO     | cat /etc/os-release:
[2025-06-03 21:52:46] NAME="CentOS Linux"
[2025-06-03 21:52:46] VERSION="7 (Core)"
[2025-06-03 21:52:46] ID="centos"
[2025-06-03 21:52:46] ID_LIKE="rhel fedora"
[2025-06-03 21:52:46] VERSION_ID="7"
[2025-06-03 21:52:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:52:46] ANSI_COLOR="0;31"
[2025-06-03 21:52:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:52:46] HOME_URL="https://www.centos.org/"
[2025-06-03 21:52:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:52:46] 
[2025-06-03 21:52:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:52:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:52:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:52:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:52:46] 
[2025-06-03 21:52:46] 2025-06-03 19:52:34,264 | INFO     | **************************************
[2025-06-03 21:52:46] 2025-06-03 19:52:34,768 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 21:52:46] 2025-06-03 19:52:34,839 | INFO     | sufficient remaining disk space (497299750912 B)
[2025-06-03 21:52:46] 2025-06-03 19:52:34,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:52:46] 2025-06-03 19:52:34,840 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:52:46] 2025-06-03 19:52:34,840 | INFO     | update_server=False
[2025-06-03 21:52:46] 2025-06-03 19:52:34,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:52:46] 2025-06-03 19:52:34,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:52:46] 2025-06-03 19:52:34,841 | INFO     | aborting loop
[2025-06-03 21:52:46] 2025-06-03 19:52:35,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:52:46] 2025-06-03 19:52:35,081 | INFO     | all job control threads have been joined
[2025-06-03 21:52:46] 2025-06-03 19:52:35,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:52:46] 2025-06-03 19:52:35,637 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:52:46] 2025-06-03 19:52:35,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:52:46] 2025-06-03 19:52:35,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:52:46] 2025-06-03 19:52:35,846 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:35,847 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:35,926 | INFO     | all payload control threads have been joined
[2025-06-03 21:52:46] 2025-06-03 19:52:35,939 | INFO     | all data control threads have been joined
[2025-06-03 21:52:46] 2025-06-03 19:52:36,086 | INFO     | [job] control thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:36,396 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:36,404 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:36,514 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:36,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:36,585 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:36,728 | INFO     | [job] validate thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:36,931 | INFO     | [payload] control thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:36,945 | INFO     | [data] control thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:37,249 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:37,273 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:37,354 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:37,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:52:46] 2025-06-03 19:52:38,636 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:39,077 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:52:46] 2025-06-03 19:52:40,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139786588047168)>', '<ExcThread(monitor, started 139785985308416)>']
[2025-06-03 21:52:46] 2025-06-03 19:52:40,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:52:46] 2025-06-03 19:52:40,664 | INFO     | [monitor] control thread has ended
[2025-06-03 21:52:46] 2025-06-03 19:52:45,539 | INFO     | all workflow threads have been joined
[2025-06-03 21:52:46] 2025-06-03 19:52:45,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:52:46] 2025-06-03 19:52:45,539 | INFO     | traces error code: 0
[2025-06-03 21:52:46] 2025-06-03 19:52:45,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:52:46] 2025-06-03 19:52:45,780 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:52:46] 2025-06-03 19:52:45,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:52:46] 2025-06-03 19:52:45,823 [wrapper] pilotpid: 13642
[2025-06-03 21:52:46] 2025-06-03 19:52:45,831 [wrapper] Pilot exit status: 0
[2025-06-03 21:52:46] 2025-06-03 19:52:45,981 [wrapper] pandaids: 6677454926
[2025-06-03 21:52:46] 2025-06-03 19:52:46,089 [wrapper] cleanup supervisor_pilot 15156 13643
[2025-06-03 21:52:46] 2025-06-03 19:52:46,134 [wrapper] Test setup, not cleaning
[2025-06-03 21:52:46] 2025-06-03 19:52:46,144 [wrapper] apfmon messages muted
[2025-06-03 21:52:46] 2025-06-03 19:52:46,160 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:52:46] 2025-06-03 19:52:46,166 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:52:46]  *** Error codes and diagnostics ***
[2025-06-03 21:52:46]     "exeErrorCode": 0,
[2025-06-03 21:52:46]     "exeErrorDiag": "",
[2025-06-03 21:52:46]     "pilotErrorCode": 0,
[2025-06-03 21:52:46]     "pilotErrorDiag": "",
[2025-06-03 21:52:46]  *** Listing of results directory ***
[2025-06-03 21:52:46] total 399408
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc    495897 Jun  3 04:50 pilot3.tar.gz
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc      5111 Jun  3 05:29 queuedata.json
[2025-06-03 21:52:46] -rwx------. 1 boinc boinc     37140 Jun  3 05:29 runpilot2-wrapper.sh
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:52:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:51 run_atlas
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:51 job.xml
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc      6392 Jun  3 17:51 init_data.xml
[2025-06-03 21:52:46] -rw-r--r--. 2 boinc boinc 218127562 Jun  3 17:51 EVNT.45006593._000732.pool.root.1
[2025-06-03 21:52:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:51 start_atlas.sh
[2025-06-03 21:52:46] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:51 shared
[2025-06-03 21:52:46] -rw-r--r--. 2 boinc boinc    508877 Jun  3 17:51 input.tar.gz
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:51 boinc_lockfile
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:51 pandaJob.out
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc    982716 Jun  3 17:51 agis_schedconf.cvmfs.json
[2025-06-03 21:52:46] drwx------. 4 boinc boinc      4096 Jun  3 17:51 pilot3
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc 183772181 Jun  3 21:51 HITS.45006595._018292.pool.root.1
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc       530 Jun  3 21:51 boinc_task_state.xml
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc      1021 Jun  3 21:51 memory_monitor_summary.json
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc   1603667 Jun  3 21:51 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc    390866 Jun  3 21:51 log.45006595._018292.job.log.tgz.1
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc        95 Jun  3 21:52 pilot_heartbeat.json
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc      7691 Jun  3 21:52 heartbeat.json
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:52 boinc_mmap_file
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:52 wrapper_checkpoint.txt
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc      4416 Jun  3 21:52 pilotlog.txt
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc   1247042 Jun  3 21:52 log.45006595._018292.job.log.1
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc       357 Jun  3 21:52 output.list
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:52 runtime_log
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc   1658880 Jun  3 21:52 result.tar.gz
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc       657 Jun  3 21:52 vvQKDmRWXg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmslhKDmxUTL7m.diag
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc      8659 Jun  3 21:52 runtime_log.err
[2025-06-03 21:52:46] -rw-r--r--. 1 boinc boinc     20508 Jun  3 21:52 stderr.txt
[2025-06-03 21:52:46] HITS file was successfully produced:
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc 183772181 Jun  3 21:51 shared/HITS.pool.root.1
[2025-06-03 21:52:46]  *** Contents of shared directory: ***
[2025-06-03 21:52:46] total 394620
[2025-06-03 21:52:46] -rw-r--r--. 2 boinc boinc 218127562 Jun  3 17:51 ATLAS.root_0
[2025-06-03 21:52:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:51 start_atlas.sh
[2025-06-03 21:52:46] -rw-r--r--. 2 boinc boinc    508877 Jun  3 17:51 input.tar.gz
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc 183772181 Jun  3 21:51 HITS.pool.root.1
[2025-06-03 21:52:46] -rw-------. 1 boinc boinc   1658880 Jun  3 21:52 result.tar.gz
21:52:47 (7961): run_atlas exited; CPU time 52782.685320
21:52:47 (7961): called boinc_finish(0)

</stderr_txt>
]]>

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