Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:08:27 (17106): wrapper (7.7.26015): starting
15:08:27 (17106): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:08:27] Arguments: --nthreads 8
[2025-06-03 15:08:27] Threads: 8
[2025-06-03 15:08:27] Checking for CVMFS
[2025-06-03 15:08:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:08:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:08:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:08:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:08:28] 2.11.2.0 24901 31796 91540 146741 0 262 13109484 25165824 3965 130560 0 16385784 99.787 18756990 2126 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:08:28] CVMFS is ok
[2025-06-03 15:08:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:08:28] Checking for apptainer binary...
[2025-06-03 15:08:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:08:28] Running /usr/bin/apptainer --version
[2025-06-03 15:08:28] apptainer version 1.3.2-1.el7
[2025-06-03 15:08:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:08:29] cg-vwn281.simple-grid.lan
[2025-06-03 15:08:29] apptainer works
[2025-06-03 15:08:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:08:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:08:29] Starting ATLAS job with PandaID=6677440354
[2025-06-03 15:08:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:23:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:23:26] 2025-06-03 16:59:10,007 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:23:26] 2025-06-03 16:59:10,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:23:26] 2025-06-03 16:59:10,007 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:23:26] 2025-06-03 16:59:10,007 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:23:26] 2025-06-03 16:59:10,012 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:23:26] 2025-06-03 16:59:10,013 | INFO     | sum of square deviations: 3485088600.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,015 | INFO     | sum of deviations: 25195043652.499996
[2025-06-03 19:23:26] 2025-06-03 16:59:10,015 | INFO     | mean x: 1748963023.5
[2025-06-03 19:23:26] 2025-06-03 16:59:10,015 | INFO     | mean y: 2459785.8883928573
[2025-06-03 19:23:26] 2025-06-03 16:59:10,015 | INFO     | -- intersect: -12641465457.128635
[2025-06-03 19:23:26] 2025-06-03 16:59:10,015 | INFO     | intersect: -12641465457.128635
[2025-06-03 19:23:26] 2025-06-03 16:59:10,015 | INFO     | chi2: 2.5154995413850125
[2025-06-03 19:23:26] 2025-06-03 16:59:10,016 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,018 | INFO     | sum of deviations: 39132732627.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,018 | INFO     | mean x: 1748962871.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,018 | INFO     | mean y: 2468921.1598173515
[2025-06-03 19:23:26] 2025-06-03 16:59:10,018 | INFO     | -- intersect: -21012030642.894783
[2025-06-03 19:23:26] 2025-06-03 16:59:10,018 | INFO     | intersect: -21012030642.894783
[2025-06-03 19:23:26] 2025-06-03 16:59:10,018 | INFO     | chi2: 1.7479000862775007
[2025-06-03 19:23:26] 2025-06-03 16:59:10,019 | INFO     | current chi2=1.7479000862775007 (change=30.514792091151726 %)
[2025-06-03 19:23:26] 2025-06-03 16:59:10,026 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 19:23:26] 2025-06-03 16:59:10,028 | INFO     | sum of deviations: 38050407461.49999
[2025-06-03 19:23:26] 2025-06-03 16:59:10,028 | INFO     | mean x: 1748962718.5
[2025-06-03 19:23:26] 2025-06-03 16:59:10,028 | INFO     | mean y: 2468163.995327103
[2025-06-03 19:23:26] 2025-06-03 16:59:10,029 | INFO     | -- intersect: -21896800069.63042
[2025-06-03 19:23:26] 2025-06-03 16:59:10,029 | INFO     | intersect: -21896800069.63042
[2025-06-03 19:23:26] 2025-06-03 16:59:10,029 | INFO     | chi2: 1.748976635692936
[2025-06-03 19:23:26] 2025-06-03 16:59:10,029 | INFO     | current chi2=1.748976635692936 (change=-0.0615910156356791 %)
[2025-06-03 19:23:26] 2025-06-03 16:59:10,029 | INFO     | right removable region: 213
[2025-06-03 19:23:26] 2025-06-03 16:59:10,030 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,031 | INFO     | sum of deviations: -14642426763.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,032 | INFO     | mean x: 1748963176.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,032 | INFO     | mean y: 2486188.3470319635
[2025-06-03 19:23:26] 2025-06-03 16:59:10,032 | INFO     | -- intersect: 7865553851.440609
[2025-06-03 19:23:26] 2025-06-03 16:59:10,032 | INFO     | intersect: 7865553851.440609
[2025-06-03 19:23:26] 2025-06-03 16:59:10,032 | INFO     | chi2: 0.8516662782757229
[2025-06-03 19:23:26] 2025-06-03 16:59:10,032 | INFO     | current chi2=0.8516662782757229 (change=66.1432544803088 %)
[2025-06-03 19:23:26] 2025-06-03 16:59:10,033 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 19:23:26] 2025-06-03 16:59:10,034 | INFO     | sum of deviations: -13407870485.5
[2025-06-03 19:23:26] 2025-06-03 16:59:10,035 | INFO     | mean x: 1748963328.5
[2025-06-03 19:23:26] 2025-06-03 16:59:10,035 | INFO     | mean y: 2485290.0327102803
[2025-06-03 19:23:26] 2025-06-03 16:59:10,035 | INFO     | -- intersect: 7719160989.495434
[2025-06-03 19:23:26] 2025-06-03 16:59:10,035 | INFO     | intersect: 7719160989.495434
[2025-06-03 19:23:26] 2025-06-03 16:59:10,035 | INFO     | chi2: 0.8381488943390717
[2025-06-03 19:23:26] 2025-06-03 16:59:10,035 | INFO     | current chi2=0.8381488943390717 (change=1.5871690921024189 %)
[2025-06-03 19:23:26] 2025-06-03 16:59:10,036 | INFO     | left removable region: 20
[2025-06-03 19:23:26] 2025-06-03 16:59:10,036 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,037 | INFO     | sum of deviations: 6652028040.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,037 | INFO     | mean x: 1748963298.0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,038 | INFO     | mean y: 2490339.92746114
[2025-06-03 19:23:26] 2025-06-03 16:59:10,038 | INFO     | -- intersect: -5216615155.810667
[2025-06-03 19:23:26] 2025-06-03 16:59:10,038 | INFO     | intersect: -5216615155.810667
[2025-06-03 19:23:26] 2025-06-03 16:59:10,038 | INFO     | chi2: 0.00030775337407962363
[2025-06-03 19:23:26] 2025-06-03 16:59:10,038 | INFO     | -- intersect: -5216615155.810667
[2025-06-03 19:23:26] 2025-06-03 16:59:10,038 | INFO     | current memory leak: 2.98 B/s (using 193 data points, chi2=0.00)
[2025-06-03 19:23:26] 2025-06-03 16:59:10,039 | INFO     | ..............................
[2025-06-03 19:23:26] 2025-06-03 16:59:10,039 | INFO     | . Timing measurements:
[2025-06-03 19:23:26] 2025-06-03 16:59:10,039 | INFO     | . get job = 0 s
[2025-06-03 19:23:26] 2025-06-03 16:59:10,040 | INFO     | . initial setup = 2 s
[2025-06-03 19:23:26] 2025-06-03 16:59:10,040 | INFO     | . payload setup = 16 s
[2025-06-03 19:23:26] 2025-06-03 16:59:10,040 | INFO     | . stage-in = 0 s
[2025-06-03 19:23:26] 2025-06-03 16:59:10,040 | INFO     | . payload execution = 13655 s
[2025-06-03 19:23:26] 2025-06-03 16:59:10,040 | INFO     | . stage-out = 10 s
[2025-06-03 19:23:26] 2025-06-03 16:59:10,040 | INFO     | . log creation = 1 s
[2025-06-03 19:23:26] 2025-06-03 16:59:10,040 | INFO     | ..............................
[2025-06-03 19:23:26] 2025-06-03 16:59:10,246 | INFO     | 
[2025-06-03 19:23:26] 2025-06-03 16:59:10,246 | INFO     | job summary report
[2025-06-03 19:23:26] 2025-06-03 16:59:10,246 | INFO     | --------------------------------------------------
[2025-06-03 19:23:26] 2025-06-03 16:59:10,246 | INFO     | PanDA job id: 6677440354
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | task id: 45006595
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | errors: (none)
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | pilot state: finished 
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | transexitcode: 0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | exeerrorcode: 0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | exeerrordiag: 
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | exitcode: 0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | exitmsg: OK
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | cpuconsumptiontime: 49591 s
[2025-06-03 19:23:26] 2025-06-03 16:59:10,247 | INFO     | nevents: 400
[2025-06-03 19:23:26] 2025-06-03 16:59:10,248 | INFO     | neventsw: 0
[2025-06-03 19:23:26] 2025-06-03 16:59:10,248 | INFO     | pid: 3986
[2025-06-03 19:23:26] 2025-06-03 16:59:10,248 | INFO     | pgrp: 3986
[2025-06-03 19:23:26] 2025-06-03 16:59:10,248 | INFO     | corecount: 8
[2025-06-03 19:23:26] 2025-06-03 16:59:10,248 | INFO     | event service: False
[2025-06-03 19:23:26] 2025-06-03 16:59:10,248 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405472, 34: 2405472, 13676: 2435289, 13687: 2444230, 13688: 2444286, 13776: 2444456}
[2025-06-03 19:23:26] 2025-06-03 16:59:10,248 | INFO     | --------------------------------------------------
[2025-06-03 19:23:26] 2025-06-03 16:59:10,248 | INFO     | 
[2025-06-03 19:23:26] 2025-06-03 16:59:10,248 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 19:23:26] 2025-06-03 16:59:10,331 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,331 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:23:26] 2025-06-03 16:59:10,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,333 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:23:26] 2025-06-03 16:59:10,333 | INFO     | job 6677440354 has completed (purged errors)
[2025-06-03 19:23:26] 2025-06-03 16:59:10,333 | INFO     | overall cleanup function is called
[2025-06-03 19:23:26] 2025-06-03 16:59:11,343 | INFO     | --- collectZombieJob: --- 10, [3986]
[2025-06-03 19:23:26] 2025-06-03 16:59:11,343 | INFO     | zombie collector waiting for pid 3986
[2025-06-03 19:23:26] 2025-06-03 16:59:11,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:23:26] 2025-06-03 16:59:11,344 | INFO     | collected zombie processes
[2025-06-03 19:23:26] 2025-06-03 16:59:11,344 | INFO     | will attempt to kill all subprocesses of pid=3986
[2025-06-03 19:23:26] 2025-06-03 16:59:11,460 | INFO     | process IDs to be killed: [3986] (in reverse order)
[2025-06-03 19:23:26] 2025-06-03 16:59:12,075 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:23:26] 2025-06-03 16:59:12,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:23:26] 2025-06-03 16:59:12,079 | INFO     | did not find any defunct processes belonging to 3986
[2025-06-03 19:23:26] 2025-06-03 16:59:12,083 | INFO     | did not find any defunct processes belonging to 3986
[2025-06-03 19:23:26] 2025-06-03 16:59:12,083 | INFO     | ready for new job
[2025-06-03 19:23:26] 2025-06-03 16:59:12,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:23:26] 2025-06-03 16:59:12,085 | INFO     | **************************************
[2025-06-03 19:23:26] 2025-06-03 16:59:12,085 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:23:26] 2025-06-03 16:59:12,086 | INFO     | **************************************
[2025-06-03 19:23:26] 2025-06-03 16:59:12,086 | INFO     | 
[2025-06-03 19:23:26] 2025-06-03 16:59:12,086 | INFO     | pilot is running in a VM
[2025-06-03 19:23:26] 2025-06-03 16:59:12,086 | INFO     | architecture information:
[2025-06-03 19:23:26] 2025-06-03 16:59:12,098 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:23:26] 2025-06-03 16:59:12,319 | INFO     | cat /etc/os-release:
[2025-06-03 19:23:26] NAME="CentOS Linux"
[2025-06-03 19:23:26] VERSION="7 (Core)"
[2025-06-03 19:23:26] ID="centos"
[2025-06-03 19:23:26] ID_LIKE="rhel fedora"
[2025-06-03 19:23:26] VERSION_ID="7"
[2025-06-03 19:23:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:23:26] ANSI_COLOR="0;31"
[2025-06-03 19:23:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:23:26] HOME_URL="https://www.centos.org/"
[2025-06-03 19:23:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:23:26] 
[2025-06-03 19:23:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:23:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:23:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:23:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:23:26] 
[2025-06-03 19:23:26] 2025-06-03 16:59:12,320 | INFO     | **************************************
[2025-06-03 19:23:26] 2025-06-03 16:59:12,823 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 19:23:26] 2025-06-03 16:59:13,043 | INFO     | sufficient remaining disk space (497205379072 B)
[2025-06-03 19:23:26] 2025-06-03 16:59:13,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:23:26] 2025-06-03 16:59:13,044 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:23:26] 2025-06-03 16:59:13,044 | INFO     | update_server=False
[2025-06-03 19:23:26] 2025-06-03 16:59:13,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:23:26] 2025-06-03 16:59:13,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:23:26] 2025-06-03 16:59:13,045 | INFO     | aborting loop
[2025-06-03 19:23:26] 2025-06-03 16:59:13,111 | INFO     | all job control threads have been joined
[2025-06-03 19:23:26] 2025-06-03 16:59:13,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:23:26] 2025-06-03 16:59:13,893 | INFO     | all data control threads have been joined
[2025-06-03 19:23:26] 2025-06-03 16:59:14,010 | INFO     | PID=23130 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 19:23:26] 2025-06-03 16:59:14,010 | INFO     | .. there are 9 such processes running
[2025-06-03 19:23:26] 2025-06-03 16:59:14,011 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:23:26] 2025-06-03 16:59:14,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:23:26] 2025-06-03 16:59:14,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:23:26] 2025-06-03 16:59:14,050 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:14,051 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:14,058 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:14,117 | INFO     | [job] control thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:14,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:23:26] 2025-06-03 16:59:14,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:14,291 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:14,462 | INFO     | all payload control threads have been joined
[2025-06-03 19:23:26] 2025-06-03 16:59:14,630 | INFO     | [job] validate thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:14,631 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:14,718 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:14,899 | INFO     | [data] control thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:15,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:23:26] 2025-06-03 16:59:15,326 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:15,331 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:15,468 | INFO     | [payload] control thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:16,220 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:16,226 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:17,889 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:23:26] 2025-06-03 16:59:17,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812802590528)>', '<ExcThread(monitor, started 139812342306560)>']
[2025-06-03 19:23:26] 2025-06-03 16:59:18,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:23:26] 2025-06-03 16:59:18,035 | INFO     | [monitor] control thread has ended
[2025-06-03 19:23:26] 2025-06-03 16:59:22,921 | INFO     | all workflow threads have been joined
[2025-06-03 19:23:26] 2025-06-03 16:59:22,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:23:26] 2025-06-03 16:59:22,921 | INFO     | traces error code: 0
[2025-06-03 19:23:26] 2025-06-03 16:59:22,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:23:26] 2025-06-03 16:59:23,308 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:23:26] 2025-06-03 16:59:23,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:23:26] 2025-06-03 16:59:23,497 [wrapper] pilotpid: 23130
[2025-06-03 19:23:26] 2025-06-03 16:59:23,601 [wrapper] Pilot exit status: 0
[2025-06-03 19:23:26] 2025-06-03 16:59:23,960 [wrapper] pandaids: 6677440354
[2025-06-03 19:23:26] 2025-06-03 16:59:24,712 [wrapper] cleanup supervisor_pilot 18304 23131
[2025-06-03 19:23:26] 2025-06-03 16:59:24,761 [wrapper] Test setup, not cleaning
[2025-06-03 19:23:26] 2025-06-03 16:59:24,848 [wrapper] apfmon messages muted
[2025-06-03 19:23:26] 2025-06-03 16:59:24,973 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:23:26] 2025-06-03 16:59:25,087 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:23:26]  *** Error codes and diagnostics ***
[2025-06-03 19:23:26]     "exeErrorCode": 0,
[2025-06-03 19:23:26]     "exeErrorDiag": "",
[2025-06-03 19:23:26]     "pilotErrorCode": 0,
[2025-06-03 19:23:26]     "pilotErrorDiag": "",
[2025-06-03 19:23:26]  *** Listing of results directory ***
[2025-06-03 19:23:26] total 391284
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc    495897 Jun  3 02:19 pilot3.tar.gz
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc      5111 Jun  3 02:24 queuedata.json
[2025-06-03 19:23:26] -rwx------. 1 boinc boinc     37140 Jun  3 02:27 runpilot2-wrapper.sh
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:23:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:08 run_atlas
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:08 job.xml
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc      6390 Jun  3 15:08 init_data.xml
[2025-06-03 19:23:26] -rw-r--r--. 2 boinc boinc 214862298 Jun  3 15:08 EVNT.45006593._000607.pool.root.1
[2025-06-03 19:23:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:08 start_atlas.sh
[2025-06-03 19:23:26] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:08 shared
[2025-06-03 19:23:26] -rw-r--r--. 2 boinc boinc    508882 Jun  3 15:08 input.tar.gz
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:08 boinc_lockfile
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc      2524 Jun  3 15:08 pandaJob.out
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc    982666 Jun  3 15:08 agis_schedconf.cvmfs.json
[2025-06-03 19:23:26] drwx------. 4 boinc boinc      4096 Jun  3 15:08 pilot3
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc 178857995 Jun  3 18:56 HITS.45006595._015159.pool.root.1
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc       531 Jun  3 18:56 boinc_task_state.xml
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc      1019 Jun  3 18:57 memory_monitor_summary.json
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc   1603667 Jun  3 18:57 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc    375669 Jun  3 18:57 log.45006595._015159.job.log.tgz.1
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc        95 Jun  3 18:58 pilot_heartbeat.json
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc      7685 Jun  3 18:59 heartbeat.json
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc      4808 Jun  3 18:59 pilotlog.txt
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc   1194905 Jun  3 18:59 log.45006595._015159.job.log.1
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc       357 Jun  3 18:59 output.list
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc       620 Jun  3 18:59 runtime_log
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc   1587200 Jun  3 18:59 result.tar.gz
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc      8659 Jun  3 18:59 runtime_log.err
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc       656 Jun  3 18:59 E5QMDmjfUg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlxWKDmxWSOdn.diag
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc      8192 Jun  3 19:23 boinc_mmap_file
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc        28 Jun  3 19:23 wrapper_checkpoint.txt
[2025-06-03 19:23:26] -rw-r--r--. 1 boinc boinc     20549 Jun  3 19:23 stderr.txt
[2025-06-03 19:23:26] HITS file was successfully produced:
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc 178857995 Jun  3 18:56 shared/HITS.pool.root.1
[2025-06-03 19:23:26]  *** Contents of shared directory: ***
[2025-06-03 19:23:26] total 386564
[2025-06-03 19:23:26] -rw-r--r--. 2 boinc boinc 214862298 Jun  3 15:08 ATLAS.root_0
[2025-06-03 19:23:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:08 start_atlas.sh
[2025-06-03 19:23:26] -rw-r--r--. 2 boinc boinc    508882 Jun  3 15:08 input.tar.gz
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc 178857995 Jun  3 18:56 HITS.pool.root.1
[2025-06-03 19:23:26] -rw-------. 1 boinc boinc   1587200 Jun  3 18:59 result.tar.gz
19:23:28 (17106): run_atlas exited; CPU time 49766.353081
19:23:28 (17106): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN