Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:16:06 (11864): wrapper (7.7.26015): starting
15:16:06 (11864): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:16:06] Arguments: --nthreads 8
[2025-06-03 15:16:06] Threads: 8
[2025-06-03 15:16:06] Checking for CVMFS
[2025-06-03 15:16:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:16:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:16:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:16:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:16:08] 2.11.2.0 22385 31997 90080 146741 3 262 14313436 25165824 4251 130560 0 18074175 99.806 19334592 2315 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:16:08] CVMFS is ok
[2025-06-03 15:16:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:16:08] Checking for apptainer binary...
[2025-06-03 15:16:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:16:08] Running /usr/bin/apptainer --version
[2025-06-03 15:16:08] apptainer version 1.3.2-1.el7
[2025-06-03 15:16:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:32:47] cg-vwn497.simple-grid.lan
[2025-06-03 15:32:47] apptainer works
[2025-06-03 15:32:47] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:32:47] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:32:47] Starting ATLAS job with PandaID=6677454659
[2025-06-03 15:32:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:22:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:22:40] 2025-06-03 17:18:25,396 | INFO     | .. there are 9 such processes running
[2025-06-03 20:22:40] 2025-06-03 17:18:26,662 | INFO     | monitor loop #995: job 0:6677454659 is in state 'finished'
[2025-06-03 20:22:40] 2025-06-03 17:18:26,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:22:40] 2025-06-03 17:18:29,167 | INFO     | monitor loop #996: job 0:6677454659 is in state 'finished'
[2025-06-03 20:22:40] 2025-06-03 17:18:29,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:22:40] 2025-06-03 17:18:31,673 | INFO     | monitor loop #997: job 0:6677454659 is in state 'finished'
[2025-06-03 20:22:40] 2025-06-03 17:18:31,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:22:40] 2025-06-03 17:18:33,679 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 20:22:40] 2025-06-03 17:18:33,680 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677454659/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:22:40] 2025-06-03 17:18:33,680 | INFO     | extracted standard info from prmon json
[2025-06-03 20:22:40] 2025-06-03 17:18:33,680 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:22:40] 2025-06-03 17:18:33,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:22:40] 2025-06-03 17:18:33,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:22:40] 2025-06-03 17:18:33,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:22:40] 2025-06-03 17:18:33,685 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:22:40] 2025-06-03 17:18:33,686 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 20:22:40] 2025-06-03 17:18:33,687 | INFO     | sum of deviations: -44208677040.5
[2025-06-03 20:22:40] 2025-06-03 17:18:33,687 | INFO     | mean x: 1748964635.5
[2025-06-03 20:22:40] 2025-06-03 17:18:33,687 | INFO     | mean y: 2571196.9095238093
[2025-06-03 20:22:40] 2025-06-03 17:18:33,687 | INFO     | -- intersect: 26927966408.44297
[2025-06-03 20:22:40] 2025-06-03 17:18:33,688 | INFO     | intersect: 26927966408.44297
[2025-06-03 20:22:40] 2025-06-03 17:18:33,688 | INFO     | chi2: 3.5789894319092896
[2025-06-03 20:22:40] 2025-06-03 17:18:33,688 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,690 | INFO     | sum of deviations: -27672284000.000008
[2025-06-03 20:22:40] 2025-06-03 17:18:33,690 | INFO     | mean x: 1748964483.0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,690 | INFO     | mean y: 2583585.7268292685
[2025-06-03 20:22:40] 2025-06-03 17:18:33,690 | INFO     | -- intersect: 18120002384.650486
[2025-06-03 20:22:40] 2025-06-03 17:18:33,690 | INFO     | intersect: 18120002384.650486
[2025-06-03 20:22:40] 2025-06-03 17:18:33,690 | INFO     | chi2: 2.827530427510599
[2025-06-03 20:22:40] 2025-06-03 17:18:33,691 | INFO     | current chi2=2.827530427510599 (change=20.996401880902138 %)
[2025-06-03 20:22:40] 2025-06-03 17:18:33,691 | INFO     | right removable region: 204
[2025-06-03 20:22:40] 2025-06-03 17:18:33,691 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,692 | INFO     | sum of deviations: -93076960898.0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,692 | INFO     | mean x: 1748964788.0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,693 | INFO     | mean y: 2608124.795121951
[2025-06-03 20:22:40] 2025-06-03 17:18:33,693 | INFO     | -- intersect: 60941364578.53081
[2025-06-03 20:22:40] 2025-06-03 17:18:33,693 | INFO     | intersect: 60941364578.53081
[2025-06-03 20:22:40] 2025-06-03 17:18:33,693 | INFO     | chi2: 1.0077591655631137
[2025-06-03 20:22:40] 2025-06-03 17:18:33,693 | INFO     | current chi2=1.0077591655631137 (change=71.84235425290143 %)
[2025-06-03 20:22:40] 2025-06-03 17:18:33,694 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,695 | INFO     | sum of deviations: -94429587830.0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,695 | INFO     | mean x: 1748964940.5
[2025-06-03 20:22:40] 2025-06-03 17:18:33,695 | INFO     | mean y: 2609164.44
[2025-06-03 20:22:40] 2025-06-03 17:18:33,695 | INFO     | -- intersect: 66580747063.413734
[2025-06-03 20:22:40] 2025-06-03 17:18:33,695 | INFO     | intersect: 66580747063.413734
[2025-06-03 20:22:40] 2025-06-03 17:18:33,695 | INFO     | chi2: 0.9593176679584197
[2025-06-03 20:22:40] 2025-06-03 17:18:33,696 | INFO     | current chi2=0.9593176679584197 (change=4.806852595344646 %)
[2025-06-03 20:22:40] 2025-06-03 17:18:33,696 | INFO     | left removable region: 20
[2025-06-03 20:22:40] 2025-06-03 17:18:33,696 | INFO     | sum of square deviations: 1931608310.0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,697 | INFO     | sum of deviations: -69868169599.5
[2025-06-03 20:22:40] 2025-06-03 17:18:33,697 | INFO     | mean x: 1748965062.5
[2025-06-03 20:22:40] 2025-06-03 17:18:33,697 | INFO     | mean y: 2617385.9836956523
[2025-06-03 20:22:40] 2025-06-03 17:18:33,698 | INFO     | -- intersect: 63264401350.016304
[2025-06-03 20:22:40] 2025-06-03 17:18:33,698 | INFO     | intersect: 63264401350.016304
[2025-06-03 20:22:40] 2025-06-03 17:18:33,698 | INFO     | chi2: 0.15731103023680018
[2025-06-03 20:22:40] 2025-06-03 17:18:33,698 | INFO     | -- intersect: 63264401350.016304
[2025-06-03 20:22:40] 2025-06-03 17:18:33,698 | INFO     | current memory leak: -36.17 B/s (using 184 data points, chi2=0.16)
[2025-06-03 20:22:40] 2025-06-03 17:18:33,704 | INFO     | ..............................
[2025-06-03 20:22:40] 2025-06-03 17:18:33,704 | INFO     | . Timing measurements:
[2025-06-03 20:22:40] 2025-06-03 17:18:33,704 | INFO     | . get job = 0 s
[2025-06-03 20:22:40] 2025-06-03 17:18:33,704 | INFO     | . initial setup = 4 s
[2025-06-03 20:22:40] 2025-06-03 17:18:33,705 | INFO     | . payload setup = 151 s
[2025-06-03 20:22:40] 2025-06-03 17:18:33,705 | INFO     | . stage-in = 0 s
[2025-06-03 20:22:40] 2025-06-03 17:18:33,705 | INFO     | . payload execution = 12908 s
[2025-06-03 20:22:40] 2025-06-03 17:18:33,705 | INFO     | . stage-out = 5 s
[2025-06-03 20:22:40] 2025-06-03 17:18:33,705 | INFO     | . log creation = 1 s
[2025-06-03 20:22:40] 2025-06-03 17:18:33,705 | INFO     | ..............................
[2025-06-03 20:22:40] 2025-06-03 17:18:33,984 | INFO     | 
[2025-06-03 20:22:40] 2025-06-03 17:18:33,984 | INFO     | job summary report
[2025-06-03 20:22:40] 2025-06-03 17:18:33,984 | INFO     | --------------------------------------------------
[2025-06-03 20:22:40] 2025-06-03 17:18:33,984 | INFO     | PanDA job id: 6677454659
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | task id: 45006595
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | errors: (none)
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | pilot state: finished 
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | transexitcode: 0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | exeerrorcode: 0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | exeerrordiag: 
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | exitcode: 0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | exitmsg: OK
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | cpuconsumptiontime: 46739 s
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | nevents: 400
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | neventsw: 0
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | pid: 646
[2025-06-03 20:22:40] 2025-06-03 17:18:33,985 | INFO     | pgrp: 646
[2025-06-03 20:22:40] 2025-06-03 17:18:33,986 | INFO     | corecount: 8
[2025-06-03 20:22:40] 2025-06-03 17:18:33,986 | INFO     | event service: False
[2025-06-03 20:22:40] 2025-06-03 17:18:33,986 | INFO     | sizes: {0: 2404353, 1: 2405039, 2: 2405238, 12: 2405238, 23: 2405266, 34: 2405294, 45: 2405450, 55: 2405478, 66: 2405506, 77: 2405534, 87: 2405590, 95: 2406104, 98
[2025-06-03 20:22:40] 2025-06-03 17:18:33,986 | INFO     | --------------------------------------------------
[2025-06-03 20:22:40] 2025-06-03 17:18:33,986 | INFO     | 
[2025-06-03 20:22:40] 2025-06-03 17:18:33,986 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 20:22:40] 2025-06-03 17:18:34,586 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,586 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,586 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,586 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,586 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,587 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,588 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:22:40] 2025-06-03 17:18:34,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,588 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:22:40] 2025-06-03 17:18:34,588 | INFO     | job 6677454659 has completed (purged errors)
[2025-06-03 20:22:40] 2025-06-03 17:18:34,588 | INFO     | overall cleanup function is called
[2025-06-03 20:22:40] 2025-06-03 17:18:35,597 | INFO     | --- collectZombieJob: --- 10, [646]
[2025-06-03 20:22:40] 2025-06-03 17:18:35,597 | INFO     | zombie collector waiting for pid 646
[2025-06-03 20:22:40] 2025-06-03 17:18:35,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:22:40] 2025-06-03 17:18:35,597 | INFO     | collected zombie processes
[2025-06-03 20:22:40] 2025-06-03 17:18:35,598 | INFO     | will attempt to kill all subprocesses of pid=646
[2025-06-03 20:22:40] 2025-06-03 17:18:35,685 | INFO     | process IDs to be killed: [646] (in reverse order)
[2025-06-03 20:22:40] 2025-06-03 17:18:36,354 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:22:40] 2025-06-03 17:18:36,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:22:40] 2025-06-03 17:18:36,357 | INFO     | did not find any defunct processes belonging to 646
[2025-06-03 20:22:40] 2025-06-03 17:18:36,361 | INFO     | did not find any defunct processes belonging to 646
[2025-06-03 20:22:40] 2025-06-03 17:18:36,361 | INFO     | ready for new job
[2025-06-03 20:22:40] 2025-06-03 17:18:36,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:22:40] 2025-06-03 17:18:36,364 | INFO     | **************************************
[2025-06-03 20:22:40] 2025-06-03 17:18:36,364 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:22:40] 2025-06-03 17:18:36,364 | INFO     | **************************************
[2025-06-03 20:22:40] 2025-06-03 17:18:36,364 | INFO     | 
[2025-06-03 20:22:40] 2025-06-03 17:18:36,365 | INFO     | pilot is running in a VM
[2025-06-03 20:22:40] 2025-06-03 17:18:36,365 | INFO     | architecture information:
[2025-06-03 20:22:40] 2025-06-03 17:18:36,376 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:22:40] 2025-06-03 17:18:36,501 | INFO     | cat /etc/os-release:
[2025-06-03 20:22:40] NAME="CentOS Linux"
[2025-06-03 20:22:40] VERSION="7 (Core)"
[2025-06-03 20:22:40] ID="centos"
[2025-06-03 20:22:40] ID_LIKE="rhel fedora"
[2025-06-03 20:22:40] VERSION_ID="7"
[2025-06-03 20:22:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:22:40] ANSI_COLOR="0;31"
[2025-06-03 20:22:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:22:40] HOME_URL="https://www.centos.org/"
[2025-06-03 20:22:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:22:40] 
[2025-06-03 20:22:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:22:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:22:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:22:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:22:40] 
[2025-06-03 20:22:40] 2025-06-03 17:18:36,501 | INFO     | **************************************
[2025-06-03 20:22:40] 2025-06-03 17:18:37,004 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 20:22:40] 2025-06-03 17:18:37,221 | INFO     | sufficient remaining disk space (497624809472 B)
[2025-06-03 20:22:40] 2025-06-03 17:18:37,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:22:40] 2025-06-03 17:18:37,221 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:22:40] 2025-06-03 17:18:37,221 | INFO     | update_server=False
[2025-06-03 20:22:40] 2025-06-03 17:18:37,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:22:40] 2025-06-03 17:18:37,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:22:40] 2025-06-03 17:18:37,273 | INFO     | all data control threads have been joined
[2025-06-03 20:22:40] 2025-06-03 17:18:37,453 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:22:40] 2025-06-03 17:18:37,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:22:40] 2025-06-03 17:18:37,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:22:40] 2025-06-03 17:18:37,605 | INFO     | all job control threads have been joined
[2025-06-03 20:22:40] 2025-06-03 17:18:37,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:22:40] 2025-06-03 17:18:37,696 | INFO     | aborting loop
[2025-06-03 20:22:40] 2025-06-03 17:18:38,227 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,228 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,235 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:22:40] 2025-06-03 17:18:38,279 | INFO     | [data] control thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,384 | INFO     | all payload control threads have been joined
[2025-06-03 20:22:40] 2025-06-03 17:18:38,445 | INFO     | [job] validate thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,611 | INFO     | [job] control thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,699 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,702 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,755 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,791 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:38,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:22:40] 2025-06-03 17:18:39,184 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:39,229 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:39,390 | INFO     | [payload] control thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:39,657 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:39,847 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:42,246 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:22:40] 2025-06-03 17:18:44,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109653800768)>', '<ExcThread(monitor, started 140108921554688)>']
[2025-06-03 20:22:40] 2025-06-03 17:18:44,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:22:40] 2025-06-03 17:18:44,495 | INFO     | [monitor] control thread has ended
[2025-06-03 20:22:40] 2025-06-03 17:18:49,382 | INFO     | all workflow threads have been joined
[2025-06-03 20:22:40] 2025-06-03 17:18:49,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:22:40] 2025-06-03 17:18:49,383 | INFO     | traces error code: 0
[2025-06-03 20:22:40] 2025-06-03 17:18:49,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:22:40] 2025-06-03 17:18:49,827 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:22:40] 2025-06-03 17:18:49,904 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:22:40] 2025-06-03 17:18:50,005 [wrapper] pilotpid: 22461
[2025-06-03 20:22:40] 2025-06-03 17:18:50,147 [wrapper] Pilot exit status: 0
[2025-06-03 20:22:40] 2025-06-03 17:18:50,580 [wrapper] pandaids: 6677454659
[2025-06-03 20:22:40] 2025-06-03 17:18:51,601 [wrapper] cleanup supervisor_pilot  6588 22462
[2025-06-03 20:22:40] 2025-06-03 17:18:51,668 [wrapper] Test setup, not cleaning
[2025-06-03 20:22:40] 2025-06-03 17:18:51,714 [wrapper] apfmon messages muted
[2025-06-03 20:22:40] 2025-06-03 17:18:51,801 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:22:40] 2025-06-03 17:18:51,903 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:22:40]  *** Error codes and diagnostics ***
[2025-06-03 20:22:40]     "exeErrorCode": 0,
[2025-06-03 20:22:40]     "exeErrorDiag": "",
[2025-06-03 20:22:40]     "pilotErrorCode": 0,
[2025-06-03 20:22:40]     "pilotErrorDiag": "",
[2025-06-03 20:22:40]  *** Listing of results directory ***
[2025-06-03 20:22:40] total 400432
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc    495897 Jun  3 04:50 pilot3.tar.gz
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc      5111 Jun  3 05:08 queuedata.json
[2025-06-03 20:22:40] -rwx------. 1 boinc boinc     37140 Jun  3 05:09 runpilot2-wrapper.sh
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:22:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:16 run_atlas
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:16 job.xml
[2025-06-03 20:22:40] -rw-r--r--. 2 boinc boinc 216516440 Jun  3 15:16 EVNT.45006593._000725.pool.root.1
[2025-06-03 20:22:40] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:16 shared
[2025-06-03 20:22:40] -rw-r--r--. 2 boinc boinc    508877 Jun  3 15:16 input.tar.gz
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc      6392 Jun  3 15:16 init_data.xml
[2025-06-03 20:22:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:16 start_atlas.sh
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:16 boinc_lockfile
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc      2523 Jun  3 15:32 pandaJob.out
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc    982724 Jun  3 15:36 agis_schedconf.cvmfs.json
[2025-06-03 20:22:40] drwx------. 4 boinc boinc      4096 Jun  3 15:36 pilot3
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc 186672707 Jun  3 19:15 HITS.45006595._018114.pool.root.1
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc       531 Jun  3 19:16 boinc_task_state.xml
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc      1018 Jun  3 19:17 memory_monitor_summary.json
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc   1603667 Jun  3 19:17 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc    375479 Jun  3 19:17 log.45006595._018114.job.log.tgz.1
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc        95 Jun  3 19:18 pilot_heartbeat.json
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc      7690 Jun  3 19:18 heartbeat.json
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc      4417 Jun  3 19:18 pilotlog.txt
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc   1143137 Jun  3 19:18 log.45006595._018114.job.log.1
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc       357 Jun  3 19:18 output.list
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:18 runtime_log
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc   1536000 Jun  3 19:18 result.tar.gz
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc      8673 Jun  3 19:18 runtime_log.err
[2025-06-03 20:22:40] -rw-------. 1 boinc boinc       656 Jun  3 19:18 6HoLDmYCXg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6ihKDmHeuLFo.diag
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:22 boinc_mmap_file
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:22 wrapper_checkpoint.txt
[2025-06-03 20:22:40] -rw-r--r--. 1 boinc boinc     20724 Jun  3 20:22 stderr.txt
[2025-06-03 20:22:41] HITS file was successfully produced:
[2025-06-03 20:22:41] -rw-------. 1 boinc boinc 186672707 Jun  3 19:15 shared/HITS.pool.root.1
[2025-06-03 20:22:41]  *** Contents of shared directory: ***
[2025-06-03 20:22:41] total 395760
[2025-06-03 20:22:41] -rw-r--r--. 2 boinc boinc 216516440 Jun  3 15:16 ATLAS.root_0
[2025-06-03 20:22:41] -rw-r--r--. 2 boinc boinc    508877 Jun  3 15:16 input.tar.gz
[2025-06-03 20:22:41] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:16 start_atlas.sh
[2025-06-03 20:22:41] -rw-------. 1 boinc boinc 186672707 Jun  3 19:15 HITS.pool.root.1
[2025-06-03 20:22:41] -rw-------. 1 boinc boinc   1536000 Jun  3 19:18 result.tar.gz
20:22:42 (11864): run_atlas exited; CPU time 46902.522896
20:22:42 (11864): called boinc_finish(0)

</stderr_txt>
]]>

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