Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 18:45:33 (14400): Detected: vboxwrapper 26206
2025-06-04 18:45:33 (14400): Detected: BOINC client v8.0.2
2025-06-04 18:45:33 (14400): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-04 18:45:34 (14400): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 18:45:34 (14400): Create VM. (boinc_624614b3499e1c46, slot#0)
2025-06-04 18:45:35 (14400): Setting Memory Size for VM. (4600MB)
2025-06-04 18:45:35 (14400): Setting CPU Count for VM. (6)
2025-06-04 18:45:35 (14400): Setting Chipset Options for VM.
2025-06-04 18:45:36 (14400): Setting Graphics Controller Options for VM.
2025-06-04 18:45:36 (14400): Setting Boot Options for VM.
2025-06-04 18:45:36 (14400): Setting Network Configuration for NAT.
2025-06-04 18:45:36 (14400): Enabling VM Network Access.
2025-06-04 18:45:37 (14400): Disabling USB Support for VM.
2025-06-04 18:45:37 (14400): Disabling COM Port Support for VM.
2025-06-04 18:45:37 (14400): Disabling LPT Port Support for VM.
2025-06-04 18:45:38 (14400): Disabling Audio Support for VM.
2025-06-04 18:45:38 (14400): Disabling Clipboard Support for VM.
2025-06-04 18:45:38 (14400): Disabling Drag and Drop Support for VM.
2025-06-04 18:45:39 (14400): Adding storage controller(s) to VM.
2025-06-04 18:45:39 (14400): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 18:45:42 (14400): Adding VirtualBox Guest Additions to VM.
2025-06-04 18:45:42 (14400): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 18:45:43 (14400): forwarding host port 55829 to guest port 80
2025-06-04 18:45:43 (14400): Enabling remote desktop for VM.
2025-06-04 18:45:43 (14400): Required extension pack not installed, remote desktop not enabled.
2025-06-04 18:45:43 (14400): Enabling shared directory for VM.
2025-06-04 18:45:44 (14400): Starting VM using VBoxManage interface. (boinc_624614b3499e1c46, slot#0)
2025-06-04 18:45:49 (14400): Successfully started VM. (PID = '9236')
2025-06-04 18:45:49 (14400): Reporting VM Process ID to BOINC.
2025-06-04 18:45:49 (14400): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-04 18:45:49 (14400): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 18:45:49 (14400): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 18:45:49 (14400): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 18:45:49 (14400): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 18:45:49 (14400): Detected: Web Application Enabled (http://localhost:55829)
2025-06-04 18:45:49 (14400): Preference change detected
2025-06-04 18:45:49 (14400): Setting CPU throttle for VM. (50%)
2025-06-04 18:45:51 (14400): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 18:45:52 (14400): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 18:45:52 (14400): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 18:45:55 (14400): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 18:45:55 (14400): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 18:45:55 (14400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 18:46:05 (14400): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 18:46:05 (14400): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 18:46:15 (14400): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 18:46:15 (14400): Guest Log: 00:00:00.000085 main     Log opened 2025-06-04T18:46:12.432351000Z
2025-06-04 18:46:15 (14400): Guest Log: 00:00:00.000159 main     OS Product: Linux
2025-06-04 18:46:15 (14400): Guest Log: 00:00:00.000181 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 18:46:15 (14400): Guest Log: 00:00:00.000198 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 18:46:15 (14400): Guest Log: 00:00:00.000213 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 18:46:15 (14400): Guest Log: 00:00:00.000213 main     Process ID: 1342
2025-06-04 18:46:15 (14400): Guest Log: 00:00:00.000214 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 18:46:15 (14400): Guest Log: 00:00:00.000653 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 18:46:15 (14400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 18:46:15 (14400): Guest Log: [INFO] Mounting shared directory
2025-06-04 18:46:15 (14400): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 18:46:22 (14400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 18:46:22 (14400): Guest Log: [INFO] Detected branch: prod
2025-06-04 18:46:22 (14400): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 18:46:22 (14400): Guest Log: Copying input files
2025-06-04 18:46:23 (14400): Guest Log: Copied input files into RunAtlas.
2025-06-04 18:46:23 (14400): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 18:46:23 (14400): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 18:46:23 (14400): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 18:46:23 (14400): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 18:46:25 (14400): Guest Log: 00:00:10.021252 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 918 832 000ns (GuestNow=1 749 059 184 517 315 000 ns GuestLast=1 749 062 772 436 147 000 ns fSetTimeLastLoop=true )
2025-06-04 18:46:38 (14400): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 18:46:38 (14400): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 18:46:38 (14400): Guest Log: 2.6.3.0 1621 0 30124 146789 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 18:46:40 (14400): Guest Log: copied the webapp to /var/www
2025-06-04 18:46:40 (14400): Guest Log: ATHENA_PROC_NUMBER=6
2025-06-04 18:46:40 (14400): Guest Log: ATHENA_CORE_NUMBER=6
2025-06-04 18:46:41 (14400): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 18:46:41 (14400): Guest Log:  *** Starting ATLAS job. (PandaID=6677454490 taskID=45006595) ***
2025-06-04 20:25:52 (14400): Status Report: Elapsed Time: '6000.263588'
2025-06-04 20:25:52 (14400): Status Report: CPU Time: '20174.078125'
2025-06-04 21:02:46 (14400): Guest Log:  *** Job finished ***
2025-06-04 21:02:46 (14400): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:36,837 | INFO     | [data] copytool_out thread has finished
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:37,093 | INFO     | [job] create_data_payload thread has finished
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:38,843 | INFO     | [data] queue_monitor thread has finished
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:40,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957011629888)>', '<ExcThread(monitor, started 139956265674496)>']
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:40,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:40,874 | INFO     | [monitor] control thread has ended
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,041 | INFO     | all workflow threads have been joined
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,041 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,041 | INFO     | traces error code: 0
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,236 [wrapper] ==== pilot stdout END ====
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,239 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,242 [wrapper] pilotpid: 5947
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,244 [wrapper] Pilot exit status: 0
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,344 [wrapper] pandaids: 6677454490
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,361 [wrapper] cleanup supervisor_pilot  4488 5948
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,364 [wrapper] Test setup, not cleaning
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,366 [wrapper] apfmon messages muted
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,368 [wrapper] ==== wrapper stdout END ====
2025-06-04 21:02:46 (14400): Guest Log: 2025-06-04 20:02:45,371 [wrapper] ==== wrapper stderr END ====
2025-06-04 21:02:46 (14400): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 21:02:46 (14400): Guest Log:     "exeErrorCode": 0,
2025-06-04 21:02:46 (14400): Guest Log:     "exeErrorDiag": "",
2025-06-04 21:02:46 (14400): Guest Log:     "pilotErrorCode": 0,
2025-06-04 21:02:46 (14400): Guest Log:     "pilotErrorDiag": "",
2025-06-04 21:02:46 (14400): Guest Log:  *** Listing of results directory ***
2025-06-04 21:02:46 (14400): Guest Log: total 175428
2025-06-04 21:02:46 (14400): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 02:50 pilot3.tar.gz
2025-06-04 21:02:46 (14400): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 03:00 queuedata.json
2025-06-04 21:02:46 (14400): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 03:02 runpilot2-wrapper.sh
2025-06-04 21:02:46 (14400): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 17:46 start_atlas.sh
2025-06-04 21:02:46 (14400): Guest Log: -rwxr-xr-x. 1 atlas atlas    508878 Jun  4 17:46 input.tar.gz
2025-06-04 21:02:46 (14400): Guest Log: -rwxr-xr-x. 1 atlas atlas      9038 Jun  4 17:46 init_data.xml
2025-06-04 21:02:46 (14400): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 17:46 EVNT.45006593._000718.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 21:02:46 (14400): Guest Log: -rw-r--r--. 1 atlas atlas      2523 Jun  4 17:46 pandaJob.out
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas    990984 Jun  4 17:47 agis_schedconf.cvmfs.json
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 17:47 agis_ddmendpoints.agis.ALL.json
2025-06-04 21:02:46 (14400): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 17:47 pilot3
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas 174045108 Jun  4 20:01 HITS.45006595._017945.pool.root.1
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 20:02 pilot_heartbeat.json
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas      1030 Jun  4 20:02 memory_monitor_summary.json
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas    298567 Jun  4 20:02 log.45006595._017945.job.log.tgz.1
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas      7680 Jun  4 20:02 heartbeat.json
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas      4722 Jun  4 20:02 pilotlog.txt
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas    615787 Jun  4 20:02 log.45006595._017945.job.log.1
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 20:02 output.list
2025-06-04 21:02:46 (14400): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 20:02 runtime_log
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas    931840 Jun  4 20:02 result.tar.gz
2025-06-04 21:02:46 (14400): Guest Log: -rw-r--r--. 1 atlas atlas      8591 Jun  4 20:02 runtime_log.err
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas       657 Jun  4 20:02 PyUKDm45Wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCihKDm6nKxhn.diag
2025-06-04 21:02:46 (14400): Guest Log: Looking for outputfile HITS.45006595._017945.pool.root.1
2025-06-04 21:02:46 (14400): Guest Log: HITS file was successfully produced
2025-06-04 21:02:46 (14400): Guest Log: -rw-------. 1 atlas atlas 174045108 Jun  4 20:01 /home/atlas/RunAtlas/HITS.45006595._017945.pool.root.1
2025-06-04 21:02:47 (14400): Guest Log: Successfully finished the ATLAS job!
2025-06-04 21:02:47 (14400): Guest Log: Copying the results back to the shared directory!
2025-06-04 21:02:47 (14400): Guest Log:  *** Contents of shared directory: ***
2025-06-04 21:02:47 (14400): Guest Log: total 379464
2025-06-04 21:02:47 (14400): Guest Log: -rwxrwxrwx. 1 root root 213048765 Jun  4 17:45 ATLAS.root_0
2025-06-04 21:02:47 (14400): Guest Log: -rwxrwxrwx. 1 root root 174045108 Jun  4 20:02 HITS.pool.root.1
2025-06-04 21:02:47 (14400): Guest Log: -rwxrwxrwx. 1 root root      9038 Jun  4 17:45 init_data.xml
2025-06-04 21:02:47 (14400): Guest Log: -rwxrwxrwx. 1 root root    508878 Jun  3 06:22 input.tar.gz
2025-06-04 21:02:47 (14400): Guest Log: -rwxrwxrwx. 1 root root    931840 Jun  4 20:02 result.tar.gz
2025-06-04 21:02:47 (14400): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  3 06:22 start_atlas.sh
2025-06-04 21:02:47 (14400): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 21:02:47 (14400): VM Completion File Detected.
2025-06-04 21:02:47 (14400): Powering off VM.
2025-06-04 21:02:47 (14400): Successfully stopped VM.
2025-06-04 21:02:47 (14400): Deregistering VM. (boinc_624614b3499e1c46, slot#0)
2025-06-04 21:02:48 (14400): Removing network bandwidth throttle group from VM.
2025-06-04 21:02:48 (14400): Removing VM from VirtualBox.
21:02:53 (14400): called boinc_finish(0)

</stderr_txt>
]]>

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