Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:38:18 (2958983): wrapper (7.7.26015): starting
23:38:18 (2958983): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 23:38:18] Arguments: --nthreads 12
[2025-06-02 23:38:18] Threads: 12
[2025-06-02 23:38:18] Checking for CVMFS
[2025-06-02 23:38:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:38:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:38:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:38:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:38:21] 2.11.5.0 1796680 22108 162032 146733 1 722 23400115 45568001 17835 130560 0 247812443 99.834 114289169 26855 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 23:38:21] CVMFS is ok
[2025-06-02 23:38:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 23:38:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 23:38:21] Further information can be found at the LHC@home message board.
[2025-06-02 23:38:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:38:21] Checking for apptainer binary...
[2025-06-02 23:38:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:38:21] Running /usr/bin/apptainer --version
[2025-06-02 23:38:21] apptainer version 1.4.0-1.el9
[2025-06-02 23:38:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 23:38:22] wns0068.triumf.lcg
[2025-06-02 23:38:22] apptainer works
[2025-06-02 23:38:22] Set ATHENA_PROC_NUMBER=12
[2025-06-02 23:38:22] Set ATHENA_CORE_NUMBER=12
[2025-06-02 23:38:22] Starting ATLAS job with PandaID=6677469496
[2025-06-02 23:38:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 23:43:34]  *** The last 200 lines of the pilot log: ***
[2025-06-02 23:43:34] 2025-06-03 06:43:17,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:43:34] 2025-06-03 06:43:17,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:43:34] 2025-06-03 06:43:17,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:43:34] 2025-06-03 06:43:17,552 | WARNING  | wrong length of table data, x=[1748932833.0], y=[1092.0] (must be same and length>=4)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | ..............................
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . Timing measurements:
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . get job = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . initial setup = 3 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . payload setup = 20 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . stage-in = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . payload execution = 41 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . stage-out = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . log creation = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | ..............................
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:43:34] 2025-06-03 06:43:17,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677469496/pilotlog.txt
[2025-06-02 23:43:34] 2025-06-03 06:43:17,587 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 23:43:34] - Log from pilotlog.txt -
[2025-06-02 23:43:34] 2025-06-03 06:43:17,549 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 23:43:34] 2025-06-03 06:43:17,550 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677469496/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,551 | INFO     | extracted standard info from prmon json
[2025-06-02 23:43:34] 2025-06-03 06:43:17,551 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:43:34] 2025-06-03 06:43:17,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:43:34] 2025-06-03 06:43:17,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:43:34] 2025-06-03 06:43:17,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:43:34] 2025-06-03 06:43:17,552 | WARNING  | wrong length of table data, x=[1748932833.0], y=[1092.0] (must be same and length>=4)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | ..............................
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . Timing measurements:
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . get job = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . initial setup = 3 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . payload setup = 20 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . stage-in = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . payload execution = 41 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . stage-out = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . log creation = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | ..............................
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:43:34] 2025-06-03 06:43:17,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677469496/pilotlog.txt
[2025-06-02 23:43:34] 2025-06-03 06:43:17,588 | WARNING  | 
[2025-06-02 23:43:34] [begin log extracts]
[2025-06-02 23:43:34] - Log from pilotlog.txt -
[2025-06-02 23:43:34] 2025-06-03 06:43:17,549 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 23:43:34] 2025-06-03 06:43:17,550 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677469496/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,551 | INFO     | extracted standard info from prmon json
[2025-06-02 23:43:34] 2025-06-03 06:43:17,551 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:43:34] 2025-06-03 06:43:17,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:43:34] 2025-06-03 06:43:17,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:43:34] 2025-06-03 06:43:17,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:43:34] 2025-06-03 06:43:17,552 | WARNING  | wrong length of table data, x=[1748932833.0], y=[1092.0] (must be same and length>=4)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | ..............................
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . Timing measurements:
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . get job = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . initial setup = 3 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . payload setup = 20 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . stage-in = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . payload execution = 41 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . stage-out = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | . log creation = 0 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | ..............................
[2025-06-02 23:43:34] 2025-06-03 06:43:17,553 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:43:34] 2025-06-03 06:43:17,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677469496/pilotlog.txt
[2025-06-02 23:43:34] [end log extracts]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,588 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,589 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | 
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | job summary report
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | --------------------------------------------------
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | PanDA job id: 6677469496
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | task id: 45006595
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 23:40:44,720 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | pilot state: failed 
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | transexitcode: 65
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | exeerrorcode: 65
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | exitcode: 65
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,818 | INFO     | cpuconsumptiontime: 17 s
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | nevents: 0
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | neventsw: 0
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | pid: 2973122
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | pgrp: 2973122
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | corecount: 12
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | event service: False
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | sizes: {0: 2404952, 1: 2405207, 2: 2405235, 13: 2405235, 25: 2405291, 26: 2405525, 35: 2405681, 66: 2428913, 67: 2433152, 70: 2433152, 211: 2433294}
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | --------------------------------------------------
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | 
[2025-06-02 23:43:34] 2025-06-03 06:43:17,819 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | job 6677469496 has completed (purged errors)
[2025-06-02 23:43:34] 2025-06-03 06:43:17,969 | INFO     | overall cleanup function is called
[2025-06-02 23:43:34] 2025-06-03 06:43:18,342 | INFO     | PID=2964443 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 23:43:34] 2025-06-03 06:43:18,342 | INFO     | .. there are 28 such processes running
[2025-06-02 23:43:34] 2025-06-03 06:43:18,975 | INFO     | --- collectZombieJob: --- 10, [2973122]
[2025-06-02 23:43:34] 2025-06-03 06:43:18,976 | INFO     | zombie collector waiting for pid 2973122
[2025-06-02 23:43:34] 2025-06-03 06:43:18,976 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 23:43:34] 2025-06-03 06:43:18,976 | INFO     | collected zombie processes
[2025-06-02 23:43:34] 2025-06-03 06:43:18,976 | INFO     | will attempt to kill all subprocesses of pid=2973122
[2025-06-02 23:43:34] 2025-06-03 06:43:19,342 | INFO     | 261s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-02 23:43:34] 2025-06-03 06:43:19,666 | INFO     | process IDs to be killed: [2973122] (in reverse order)
[2025-06-02 23:43:34] 2025-06-03 06:43:20,183 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 23:43:34] 2025-06-03 06:43:20,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 23:43:34] 2025-06-03 06:43:20,232 | INFO     | did not find any defunct processes belonging to 2973122
[2025-06-02 23:43:34] 2025-06-03 06:43:20,270 | INFO     | did not find any defunct processes belonging to 2973122
[2025-06-02 23:43:34] 2025-06-03 06:43:20,271 | INFO     | ready for new job
[2025-06-02 23:43:34] 2025-06-03 06:43:20,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 23:43:34] 2025-06-03 06:43:20,283 | INFO     | **************************************
[2025-06-02 23:43:34] 2025-06-03 06:43:20,283 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 23:43:34] 2025-06-03 06:43:20,283 | INFO     | **************************************
[2025-06-02 23:43:34] 2025-06-03 06:43:20,283 | INFO     | 
[2025-06-02 23:43:34] 2025-06-03 06:43:20,285 | INFO     | architecture information:
[2025-06-02 23:43:34] 2025-06-03 06:43:20,308 | INFO     | executing command: cat /etc/os-release
[2025-06-02 23:43:34] 2025-06-03 06:43:20,356 | INFO     | cat /etc/os-release:
[2025-06-02 23:43:34] NAME="CentOS Linux"
[2025-06-02 23:43:34] VERSION="7 (Core)"
[2025-06-02 23:43:34] ID="centos"
[2025-06-02 23:43:34] ID_LIKE="rhel fedora"
[2025-06-02 23:43:34] VERSION_ID="7"
[2025-06-02 23:43:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 23:43:34] ANSI_COLOR="0;31"
[2025-06-02 23:43:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 23:43:34] HOME_URL="https://www.centos.org/"
[2025-06-02 23:43:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 23:43:34] 
[2025-06-02 23:43:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 23:43:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 23:43:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 23:43:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 23:43:34] 
[2025-06-02 23:43:34] 2025-06-03 06:43:20,356 | INFO     | **************************************
[2025-06-02 23:43:34] 2025-06-03 06:43:20,860 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 23:43:34] 2025-06-03 06:43:20,991 | INFO     | sufficient remaining disk space (1894975012864 B)
[2025-06-02 23:43:34] 2025-06-03 06:43:20,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 23:43:34] 2025-06-03 06:43:20,991 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 23:43:34] 2025-06-03 06:43:20,992 | INFO     | update_server=False
[2025-06-02 23:43:34] 2025-06-03 06:43:20,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 23:43:34] 2025-06-03 06:43:21,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 23:43:34] 2025-06-03 06:43:21,004 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 23:43:34] 2025-06-03 06:43:21,004 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 23:43:34] 2025-06-03 06:43:21,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 23:43:34] 2025-06-03 06:43:21,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 23:43:34] 2025-06-03 06:43:21,284 | INFO     | all data control threads have been joined
[2025-06-02 23:43:34] 2025-06-03 06:43:21,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:43:34] 2025-06-03 06:43:21,987 | INFO     | aborting loop
[2025-06-02 23:43:34] 2025-06-03 06:43:21,998 | INFO     | [job] retrieve thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:22,032 | INFO     | all job control threads have been joined
[2025-06-02 23:43:34] 2025-06-03 06:43:22,175 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:22,291 | INFO     | [data] control thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:22,311 | INFO     | all payload control threads have been joined
[2025-06-02 23:43:34] 2025-06-03 06:43:22,543 | INFO     | [payload] failed_post thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:22,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:22,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:43:34] 2025-06-03 06:43:22,850 | INFO     | [data] copytool_in thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:22,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 23:43:34] 2025-06-03 06:43:22,924 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:22,993 | INFO     | [job] job monitor thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:23,010 | INFO     | [data] copytool_out thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:23,040 | INFO     | [job] control thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:23,242 | INFO     | [job] validate thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:23,248 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:23,317 | INFO     | [payload] control thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:23,421 | INFO     | [payload] validate_post thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:23,836 | INFO     | [job] queue monitor thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:26,905 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 23:43:34] 2025-06-03 06:43:27,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361215919936)>', '<ExcThread(monitor, started 140360888059648)>']
[2025-06-02 23:43:34] 2025-06-03 06:43:28,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 23:43:34] 2025-06-03 06:43:28,046 | INFO     | [monitor] control thread has ended
[2025-06-02 23:43:34] 2025-06-03 06:43:32,409 | INFO     | all workflow threads have been joined
[2025-06-02 23:43:34] 2025-06-03 06:43:32,410 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 23:43:34] 2025-06-03 06:43:32,410 | INFO     | traces error code: 0
[2025-06-02 23:43:34] 2025-06-03 06:43:32,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 23:43:34] 2025-06-03 06:43:32,842 [wrapper] ==== pilot stdout END ====
[2025-06-02 23:43:34] 2025-06-03 06:43:32,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 23:43:34] 2025-06-03 06:43:32,961 [wrapper] pilotpid: 2964443
[2025-06-02 23:43:34] 2025-06-03 06:43:33,009 [wrapper] Pilot exit status: 0
[2025-06-02 23:43:34] 2025-06-03 06:43:33,319 [wrapper] pandaids: 6677469496
[2025-06-02 23:43:34] 2025-06-03 06:43:33,876 [wrapper] cleanup supervisor_pilot 2964449 2964444
[2025-06-02 23:43:34] 2025-06-03 06:43:33,898 [wrapper] Test setup, not cleaning
[2025-06-02 23:43:34] 2025-06-03 06:43:33,942 [wrapper] apfmon messages muted
[2025-06-02 23:43:34] 2025-06-03 06:43:33,973 [wrapper] ==== wrapper stdout END ====
[2025-06-02 23:43:34] 2025-06-03 06:43:33,998 [wrapper] ==== wrapper stderr END ====
[2025-06-02 23:43:34]  *** Error codes and diagnostics ***
[2025-06-02 23:43:34]     "exeErrorCode": 65,
[2025-06-02 23:43:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 23:43:34]     "pilotErrorCode": 1305,
[2025-06-02 23:43:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 23:43:34]  *** Listing of results directory ***
[2025-06-02 23:43:34] total 212700
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:53 pilot3.tar.gz
[2025-06-02 23:43:34] -rwx------. 1 boinc boinc     37140 Jun  2 22:04 runpilot2-wrapper.sh
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:04 queuedata.json
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc       100 Jun  2 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 23:43:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 23:38 run_atlas
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc       105 Jun  2 23:38 job.xml
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc      6601 Jun  2 23:38 init_data.xml
[2025-06-02 23:43:34] -rw-r--r--. 2 boinc boinc 213769728 Jun  2 23:38 EVNT.45006593._000808.pool.root.1
[2025-06-02 23:43:34] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:38 start_atlas.sh
[2025-06-02 23:43:34] drwxrwx--x. 2 boinc boinc      4096 Jun  2 23:38 shared
[2025-06-02 23:43:34] -rw-r--r--. 2 boinc boinc    508876 Jun  2 23:38 input.tar.gz
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc         0 Jun  2 23:38 boinc_lockfile
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc      2524 Jun  2 23:38 pandaJob.out
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc    986901 Jun  2 23:38 agis_schedconf.cvmfs.json
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc   1603667 Jun  2 23:39 agis_ddmendpoints.agis.ALL.json
[2025-06-02 23:43:34] drwx------. 4 boinc boinc      4096 Jun  2 23:39 pilot3
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc       962 Jun  2 23:40 memory_monitor_summary.json
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc     20857 Jun  2 23:40 log.45006595._020197.job.log.tgz.1
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc        95 Jun  2 23:43 pilot_heartbeat.json
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc      8339 Jun  2 23:43 heartbeat.json
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc       523 Jun  2 23:43 boinc_task_state.xml
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc        22 Jun  2 23:43 wrapper_checkpoint.txt
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc      8192 Jun  2 23:43 boinc_mmap_file
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc      4475 Jun  2 23:43 pilotlog.txt
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc     79669 Jun  2 23:43 log.45006595._020197.job.log.1
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc       188 Jun  2 23:43 output.list
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:43 runtime_log
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc    122880 Jun  2 23:43 result.tar.gz
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc      8484 Jun  2 23:43 runtime_log.err
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc       644 Jun  2 23:43 q9zMDmO0Yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm44hKDmBYlsxm.diag
[2025-06-02 23:43:34] -rw-r--r--. 1 boinc boinc     21820 Jun  2 23:43 stderr.txt
[2025-06-02 23:43:34] No HITS result produced
[2025-06-02 23:43:34]  *** Contents of shared directory: ***
[2025-06-02 23:43:34] total 209396
[2025-06-02 23:43:34] -rw-r--r--. 2 boinc boinc 213769728 Jun  2 23:38 ATLAS.root_0
[2025-06-02 23:43:34] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:38 start_atlas.sh
[2025-06-02 23:43:34] -rw-r--r--. 2 boinc boinc    508876 Jun  2 23:38 input.tar.gz
[2025-06-02 23:43:34] -rw-------. 1 boinc boinc    122880 Jun  2 23:43 result.tar.gz
23:43:36 (2958983): run_atlas exited; CPU time 27.723564
23:43:36 (2958983): called boinc_finish(0)

</stderr_txt>
]]>

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